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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1834800..1835908+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003402-T1 ID=KJC3_003402-T1|Name=KJC3_003402-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1109bp|location=Sequence derived from alignment at ch3:1834800..1835908+ (Aspergillus niger KJC3)
CTTACATTTCAGCTGCCTAGTATGCCATCTGTTTTCCTAATCGGCCCTGG
CCTGATCGGCGGAGAGGTTCTCGACCTCCTTCTGCGCGACAAAAAGTATG
AGATCACGACCCTTGTGCGCAGGGAGGCTGCCCGGCCAGCCTTCCACGAA
CTCGGCGTCAAGACTGTCATGGGATCGTTAGCCGACAAAGGCGTGATTTC
AAAGCAAACAGCGACCAGCGATATTGTGATTCACACTGCTACTGCCGATG
ACCTGCCCTCTGTACAAGCCGTCCTTGAGGGTGTCCGGCAACGAACCCAG
CTCGGACAAGAGACCATCTACATCCACACTAGTGGAGCAAGTCTCATTGG
GGATGGTGCAAAAGGCTCTTATAAGAGCGATATGATCTTCGACGACGAAA
CTCCAAGCTCCATCGACTCACTTCCGGACCATGCGCCCCATCGAGAAATC
GACCTGGCCATTGTGAATGCACGCAAAGAGCTTTCGTCCCATGCAAAGTT
TGCGATCATGATTCCACCGGTTATTTACGGTGTCGGTACACGTGAGAAGC
GACTCTCCATCCAGCTCCCAACGCTGGTGCGATATTCCATTAAGCATGGA
TATCCCGGTATGATCGGCGATGGCCTCTCTGTGTGGAACCAGGTACACGT
GAAAGACCTCGCGCGCGGCTACCTCACGCTTCTTCAATGGTTGGAGCGGG
CATCCAGCAAGGACATCTTCCCGAATCCGTACTTCTTCTGTGAGAACGGC
CAGGAGCTCTCGTGGGGGGAATGCGCGGCTCAAATTGGACGGATCTTGAA
GGAAGCAGGAAAAGTGGCAGATTCAACTCCCAAGACTATCCCAACGGAGA
AGTACAATGATCTTTTCGGCGACTTTTCAGGTCTTGTGGTCGGTTCCAAC
GCCCGTAATCGTGCTAATCGGCTCCGCAAGCTGGGCTGGGAACCGCGGGA
GAAGAACACCTTTGCTTCTCTGGAGGAGGATGAGATCCCCCTTATCTTGC
AGGAGAAGGGGGAGTTCAATGGTTATGCTGCACCGGTAGCTTCAGGCAAG
TTTTAGGATGAGAGATGAGACTGGCGTTGGAGTTGACTAGTATTGTGTAA
ATAGATGAC back to topCoding sequence (CDS) from alignment at ch3:1834800..1835908+ >KJC3_003402-T1 ID=KJC3_003402-T1|Name=KJC3_003402-T1|organism=Aspergillus niger KJC3|type=CDS|length=1035bp|location=Sequence derived from alignment at ch3:1834800..1835908+ (Aspergillus niger KJC3)
ATGCCATCTGTTTTCCTAATCGGCCCTGGCCTGATCGGCGGAGAGGTTCT
CGACCTCCTTCTGCGCGACAAAAAGTATGAGATCACGACCCTTGTGCGCA
GGGAGGCTGCCCGGCCAGCCTTCCACGAACTCGGCGTCAAGACTGTCATG
GGATCGTTAGCCGACAAAGGCGTGATTTCAAAGCAAACAGCGACCAGCGA
TATTGTGATTCACACTGCTACTGCCGATGACCTGCCCTCTGTACAAGCCG
TCCTTGAGGGTGTCCGGCAACGAACCCAGCTCGGACAAGAGACCATCTAC
ATCCACACTAGTGGAGCAAGTCTCATTGGGGATGGTGCAAAAGGCTCTTA
TAAGAGCGATATGATCTTCGACGACGAAACTCCAAGCTCCATCGACTCAC
TTCCGGACCATGCGCCCCATCGAGAAATCGACCTGGCCATTGTGAATGCA
CGCAAAGAGCTTTCGTCCCATGCAAAGTTTGCGATCATGATTCCACCGGT
TATTTACGGTGTCGGTACACGTGAGAAGCGACTCTCCATCCAGCTCCCAA
CGCTGGTGCGATATTCCATTAAGCATGGATATCCCGGTATGATCGGCGAT
GGCCTCTCTGTGTGGAACCAGGTACACGTGAAAGACCTCGCGCGCGGCTA
CCTCACGCTTCTTCAATGGTTGGAGCGGGCATCCAGCAAGGACATCTTCC
CGAATCCGTACTTCTTCTGTGAGAACGGCCAGGAGCTCTCGTGGGGGGAA
TGCGCGGCTCAAATTGGACGGATCTTGAAGGAAGCAGGAAAAGTGGCAGA
TTCAACTCCCAAGACTATCCCAACGGAGAAGTACAATGATCTTTTCGGCG
ACTTTTCAGGTCTTGTGGTCGGTTCCAACGCCCGTAATCGTGCTAATCGG
CTCCGCAAGCTGGGCTGGGAACCGCGGGAGAAGAACACCTTTGCTTCTCT
GGAGGAGGATGAGATCCCCCTTATCTTGCAGGAGAAGGGGGAGTTCAATG
GTTATGCTGCACCGGTAGCTTCAGGCAAGTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003402-T1.utr5p1 | KJC3_003402-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003402-T1.utr3p1 | KJC3_003402-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1834800..1835908 + |
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