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KJC3_003416-T1, KJC3_003416-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003416-T1
Unique NameKJC3_003416-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1869053..1871979-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003416-T1 ID=KJC3_003416-T1|Name=KJC3_003416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2927bp|location=Sequence derived from alignment at ch3:1869053..1871979- (Aspergillus niger KJC3)
GCTCTCCAGCCAGTCTCGCATCTACTATTGCAGTAAAGGAATTTACGTTT
ATCCGGTGCCCAGTAGTACTGTTCAGGCATCAACAGTGGCTCGTTTGGCG
CTCTCGTTCTCGTCCCTCTACTCATATGCGATCAATGCATCTACTTACTA
TGGATAACCTAATATCATCGGCCCCTAATCCAGGTCACCAACTAAGCTCG
AGCATTGGCCTTCTCGAACCCGATCAAAGCCTCTCCATCCCGATCCCTGG
GTCTCACTTCTAGCGTGTTTCGACGCAGCGAGACCGGCCAGGTTATGAGC
CGGTCTTCCCTTCCCGATTCGGAGCTCTGAATCCCGATAGACTGCCGGCT
CTGTGCCCTTTGTGATCAATGCAGATGTTCCAGTCCCAGGATAGCCCGTC
GTCCCTAACCAGATCCACTCCTAACCAAGTCCGTGCCCGTCGGAAAACCC
AGATGATGGTTCATTCTCCGGTTCACTAAGATGCTTGGCAGGTCCGAACC
AGGCCATGGACGCTTTTCTTAGAAACTCTACACTGACACGAGCAGCCACT
ATCAAACCACCGCGGTTTCACGGGCCCCTATCCATGGGGAGACAGCCATG
GCTCTCCGCGATGCGGGATAGGAAGACGGGAACCATGCGACGGAAAAAAA
AGGCATATATAGCCTCTGTCACCACGCCCATCAGGTTGACTTTCTTTCCA
TCCCATCCTCATCCCTCTCATCAGTCTTTTCTCCTCTTTTTTCTTCTCGC
TCTCGTTTGCTTTCCAGATCGCCTGTGGCGTATCGCTCTTTGTGTTTAAC
TTTTCAATAATTCCGTTCAACTCTCGTTCTTCTCGATTCCCGTTTCTCGA
AGGTAACCTTCCCATCACTTCCTGGTCCTTCGACACAACCACACCTTAGC
ACAGGGCTAACCATCACAGAAACCGAAATCAATCAGTCAAAATGGTTCGC
TTCTACAGAGTCTCCGCCGCGACCCTCGTCACCGCCGCCACCGTCTCCGC
CATCCCTATCCCATGCCTCCTTCCCTTCCTCAGCGGCGCTGGTAGCCTCC
TGGGAAGCTCCGGCCTGGGTGCCAGTCTCGGCCTCGGTGGCAGTGCCAGC
GGCAGTGGCGGCGCCGACTTGGGCGCCAGCCTTGGTGGTAGCGGCAGCGG
TAGTGGAAGTGCTGGTGCTGGTCTCGGTGCTGACCTCGGCGCCGGTCTGA
GCGGCAGCGCTGGTCTGGGTGCCCTTCTGGGCGGTGGTGCCAGTGCCACC
GGTGCTGCAGGTGCTGGTGCGTCTGGAGCCGCTGGTCTTGGTGGCTCTGC
TGACCTGGGCGCTGACCTGGGTGCCGGTCTGGGTGGAAGTGGTAGCGCTG
GTGCTGGCCTTGGTGCCAGTGCTACTGGCGCTGCGGGTGCTGGTGCCTCG
GGCTCTGCTGGTCTAGGTGCCGGTCTTGGTGGATCTGCTGGCCTCGGTGG
CTCCGCCGGTCTCGGTGGCAGCGCTGGTCTCGGCGCTGGTCTGGGAGGAA
GTGCCACTGGTGCCGCTGGTGCCGGTGCTTCTGGCGCTGCTGGCCTGGGT
GGTAGCGCCGGCCTTGGTGCTGGTCTTGGAGGAAGTGCTACTGGCGCTGC
TGGCGCTGGCGCTTCCGGTGCTGCTGGTCTCGGCGGTTCCGCCGGTCTTG
GTGGCTCTGCCGGTCTGGGCGCTGGTCTGGGAGGAAGTGCTACCGGTTCT
CTCGGTGCTGGTGCCTCGGGTGCTGCTGGCCTTGGTGGCTCTGCCGGTCT
TGGTGGCAGTGCTACCGGTGCTGCAGGTGCAGGTGCTTCCGGCGCTGCTG
GCCTTGGTGCTGGTGCCGGTCTTGGAGGAAGTGCTACCGGTTCTCTCGGT
GCTGGTGCCTCAGGTGCTGCTGGTCTTGGTGCTGGTGCCGGTCTTGGTGG
CAGCGCTACCGGTGCTGCTGGCGCTGGTGCTTCCGGCGCTGCTGGTGCTG
GTCTCGGTGCTGGCCTTTCCGGCTCTGGCTCCGCCGGACTCTCTGGATCT
GGATCTGCTGGTCTCGGTGCTGGCGCGGGTCTTGGTGCCAGCCCCAGCGG
CAGCGTCGGTGCTAGCCCTAGCGCTGGTGCCGGTCTTGGTGCCGGTCTCT
CTGGATCTGGCTCCGCTGGTCTCTCTGGATCTGGATCTGCTGGCCTCGGT
GCGGGTGCTGGTCTCGGTGGTTCCGGCAGTGCCTCTGGTGATGTGAGCGG
TAGCGGATCCGGCTCTGCTGATCTTGGTGCCGGAGCCTCTGGCAGCGGTG
ATGACGATACTGACGTCGGTGTTTCTCCTACGACTGCGGAAGCTCCCAGT
GCCACCACCACTTGGGTCAGTGCCTCCACCAGCGTCTCTCTCGGTCCTTA
CGGTGGCGCCAGCGGCAGCATCACGGCTGGAGGATCCACGGGCGGCGACG
ACAGCGACGATTCCGGTGCCGGAGCTGATGCCGATGCAGATGCGGATGCT
AGCGCGGATGCCGATGCCAGCGCTGATGCGGATGCCGATGCCTCTGCCAG
CGGCAGCGGAAGTGCTGATGCCAACGCTAGTGCTGGGGCCTCCGTTAGTG
GTAGCGCTGAGGCCTCTGCTAGCGCTAATGCGAAGGCTTCTGCGTCCTTG
AACTTCTCTGCTTAAGGTACTTTCCACTCTTCATCCTGAAATATTTGCAG
GGTTGCTAATAAGTGAACAGGAGTTACGGCGTTGGTATCAATCGATCGCT
CTAGAGTGACACCACACTGCCTCGAGCTTCCGGGAATCGATTGTTTCAAA
ATGTTAGGTATATCACCTGGGATGGGAAATGGAAATGGGTTCAATGCTGT
CATTCGTTCATGATTATATTGTCTAATTATTTGTGTCATTCTTTGACGAG
TACTACTTACACTGAGATTGAGAGGATCCAGGCCAGTCTGCCATAGTCAT
AATCTGAATTCAAGCCTGTTGATAGAT
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Coding sequence (CDS) from alignment at ch3:1869053..1871979-

>KJC3_003416-T1 ID=KJC3_003416-T1|Name=KJC3_003416-T1|organism=Aspergillus niger KJC3|type=CDS|length=1674bp|location=Sequence derived from alignment at ch3:1869053..1871979- (Aspergillus niger KJC3)
ATGGTTCGCTTCTACAGAGTCTCCGCCGCGACCCTCGTCACCGCCGCCAC
CGTCTCCGCCATCCCTATCCCATGCCTCCTTCCCTTCCTCAGCGGCGCTG
GTAGCCTCCTGGGAAGCTCCGGCCTGGGTGCCAGTCTCGGCCTCGGTGGC
AGTGCCAGCGGCAGTGGCGGCGCCGACTTGGGCGCCAGCCTTGGTGGTAG
CGGCAGCGGTAGTGGAAGTGCTGGTGCTGGTCTCGGTGCTGACCTCGGCG
CCGGTCTGAGCGGCAGCGCTGGTCTGGGTGCCCTTCTGGGCGGTGGTGCC
AGTGCCACCGGTGCTGCAGGTGCTGGTGCGTCTGGAGCCGCTGGTCTTGG
TGGCTCTGCTGACCTGGGCGCTGACCTGGGTGCCGGTCTGGGTGGAAGTG
GTAGCGCTGGTGCTGGCCTTGGTGCCAGTGCTACTGGCGCTGCGGGTGCT
GGTGCCTCGGGCTCTGCTGGTCTAGGTGCCGGTCTTGGTGGATCTGCTGG
CCTCGGTGGCTCCGCCGGTCTCGGTGGCAGCGCTGGTCTCGGCGCTGGTC
TGGGAGGAAGTGCCACTGGTGCCGCTGGTGCCGGTGCTTCTGGCGCTGCT
GGCCTGGGTGGTAGCGCCGGCCTTGGTGCTGGTCTTGGAGGAAGTGCTAC
TGGCGCTGCTGGCGCTGGCGCTTCCGGTGCTGCTGGTCTCGGCGGTTCCG
CCGGTCTTGGTGGCTCTGCCGGTCTGGGCGCTGGTCTGGGAGGAAGTGCT
ACCGGTTCTCTCGGTGCTGGTGCCTCGGGTGCTGCTGGCCTTGGTGGCTC
TGCCGGTCTTGGTGGCAGTGCTACCGGTGCTGCAGGTGCAGGTGCTTCCG
GCGCTGCTGGCCTTGGTGCTGGTGCCGGTCTTGGAGGAAGTGCTACCGGT
TCTCTCGGTGCTGGTGCCTCAGGTGCTGCTGGTCTTGGTGCTGGTGCCGG
TCTTGGTGGCAGCGCTACCGGTGCTGCTGGCGCTGGTGCTTCCGGCGCTG
CTGGTGCTGGTCTCGGTGCTGGCCTTTCCGGCTCTGGCTCCGCCGGACTC
TCTGGATCTGGATCTGCTGGTCTCGGTGCTGGCGCGGGTCTTGGTGCCAG
CCCCAGCGGCAGCGTCGGTGCTAGCCCTAGCGCTGGTGCCGGTCTTGGTG
CCGGTCTCTCTGGATCTGGCTCCGCTGGTCTCTCTGGATCTGGATCTGCT
GGCCTCGGTGCGGGTGCTGGTCTCGGTGGTTCCGGCAGTGCCTCTGGTGA
TGTGAGCGGTAGCGGATCCGGCTCTGCTGATCTTGGTGCCGGAGCCTCTG
GCAGCGGTGATGACGATACTGACGTCGGTGTTTCTCCTACGACTGCGGAA
GCTCCCAGTGCCACCACCACTTGGGTCAGTGCCTCCACCAGCGTCTCTCT
CGGTCCTTACGGTGGCGCCAGCGGCAGCATCACGGCTGGAGGATCCACGG
GCGGCGACGACAGCGACGATTCCGGTGCCGGAGCTGATGCCGATGCAGAT
GCGGATGCTAGCGCGGATGCCGATGCCAGCGCTGATGCGGATGCCGATGC
CTCTGCCAGCGGCAGCGGAAGTGCTGATGCCAACGCTAGTGCTGGGGCCT
CCGTTAGTGGTAGCGCTGAGGCCTCTGCTAGCGCTAATGCGAAGGCTTCT
GCGTCCTTGAACTTCTCTGCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003416KJC3_003416Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003416-T1KJC3_003416-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003416-T1.cdsKJC3_003416-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003416-T1.utr3p2KJC3_003416-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_003416-T1.utr3p1KJC3_003416-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003416-T1.exon4KJC3_003416-T1.exon4Aspergillus niger KJC3exon
KJC3_003416-T1.exon3KJC3_003416-T1.exon3Aspergillus niger KJC3exon
KJC3_003416-T1.exon2KJC3_003416-T1.exon2Aspergillus niger KJC3exon
KJC3_003416-T1.exon1KJC3_003416-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003416-T1.utr5p3KJC3_003416-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_003416-T1.utr5p2KJC3_003416-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003416-T1.utr5p1KJC3_003416-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1869053..1871979 -
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