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KJC3_003440-T1, KJC3_003440-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003440-T1
Unique NameKJC3_003440-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1922009..1922797-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003440-T1 ID=KJC3_003440-T1|Name=KJC3_003440-T1|organism=Aspergillus niger KJC3|type=mRNA|length=789bp|location=Sequence derived from alignment at ch3:1922009..1922797- (Aspergillus niger KJC3)
CCCCCCAATATTGTCCCATCTAGAGGCATCAAGTCAAAACCCCATACTCC
AAGTATCACACACTATGTTTTCATAATTCAAACCTACCAAAACAATCCCA
AAATGTCCGTCCGAGTCATCATCTACGCCTACCGTAAACCCGGCCTTGAC
CTCCAAATCTTCAAGGACCGCTACGAAGCCCACATCGAGCTGGTCAAGCG
TCTCTCTGGCGACGACTTCCCCCTGTCCCACAAGCGCATGTACATCGCGC
GTACCACCATCAAAAACTCCCAGACGGAAGAAAGCAACAACAACTCGACT
CGCAATGCCCTTACTCCTGCCACTGTTCTTGTTGGTCGCCAGACAGATTT
CGATTTTGATGCCTACGCTGAACTCACCTTTGCGGACCAGACAGCCTTCC
AGACGTTCTCGGCGAAGGTGATGGCGCCTGAAGCGGCAGCTCAAATTGCT
GCAGATGAGGAAGGGTTTTTGGATCGGAGTAAGCTGGGGATTGCTCTTTT
GGGGGATGTGGTGGAAACTACCAATTGAAAGGGGAAGGGAAAGAGGGGGT
GTGTAGTGTGGCTAGAGATGTATATTTTTTGTATGTCCTTGCCCAATGGA
CAGACTGCCACATGTGGATGTCTATGTATGACGCTAGTTGCTGGGGCGGA
GGGAAGCGCGGGGTGTCTTTCAAGACTAGAAGCACCATTCTGATCCCCCT
AGTTATTGTATAGAGCTAATCGATGATACATAATCAGGCCTCTAAAAGAG
GGTCTATACATCCAATAAATGTCAGAGCAAATACTCACT
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Coding sequence (CDS) from alignment at ch3:1922009..1922797-

>KJC3_003440-T1 ID=KJC3_003440-T1|Name=KJC3_003440-T1|organism=Aspergillus niger KJC3|type=CDS|length=426bp|location=Sequence derived from alignment at ch3:1922009..1922797- (Aspergillus niger KJC3)
ATGTCCGTCCGAGTCATCATCTACGCCTACCGTAAACCCGGCCTTGACCT
CCAAATCTTCAAGGACCGCTACGAAGCCCACATCGAGCTGGTCAAGCGTC
TCTCTGGCGACGACTTCCCCCTGTCCCACAAGCGCATGTACATCGCGCGT
ACCACCATCAAAAACTCCCAGACGGAAGAAAGCAACAACAACTCGACTCG
CAATGCCCTTACTCCTGCCACTGTTCTTGTTGGTCGCCAGACAGATTTCG
ATTTTGATGCCTACGCTGAACTCACCTTTGCGGACCAGACAGCCTTCCAG
ACGTTCTCGGCGAAGGTGATGGCGCCTGAAGCGGCAGCTCAAATTGCTGC
AGATGAGGAAGGGTTTTTGGATCGGAGTAAGCTGGGGATTGCTCTTTTGG
GGGATGTGGTGGAAACTACCAATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003440KJC3_003440Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003440-T1.cdsKJC3_003440-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003440-T1.utr3p1KJC3_003440-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003440-T1.exon1KJC3_003440-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003440-T1.utr5p1KJC3_003440-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003440-T1KJC3_003440-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR009799
DBxrefPFAM:PF07110
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1922009..1922797 -
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