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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1928340..1929671+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003442-T1 ID=KJC3_003442-T1|Name=KJC3_003442-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1332bp|location=Sequence derived from alignment at ch3:1928340..1929671+ (Aspergillus niger KJC3)
ATGGCTAAAAGCCAGAGTCGTCCTCCACGCAGAAAGGCATGTAGCAACTG
TATCAAGTCTAAGGTACGGTGCACTCTAGATCGACCCGCATGCTCTCGGT
GCAGGTTGACTGGCCGAACCTGCGATTATGGTACTACGACTACAGCCTTG
GAGCATCGCCACTTTCCTCGCCTACAAGAAACACATATTGGAGAAACCGA
TTCGTTAGAGAGTCAAAGTGTGCCTTCGCCTTCAGTTCCAGAACTCAGCT
CAAGAGTGTTGCAGACGCCACCATCTTTGTCATATACTCCCAGTCCTTCT
GCGAACAATACTATGTGGTGTCCGCCAAACCAGCAGGCTCAGGAACTTCC
CATCGAAGCGTTCTCAAAAGAGAAGGAATTCGACTTCGAAGCGATCAATT
TGACCCCCAGCTCAATTGCAGAGGATATTCGCGACCGGTGGCTTAGGCCC
TTTTTCCTGCCTGCGCACGGACGAAGTGAAACTCCAAAAGTCTGCCATCC
TCATACCCTACAATTTATTGCGCGGATTATGAAAACATATCCGCGATACA
TGTTGAGGGACAGACGACCCCCTCCTATTATTCACCATGTCCAGGTCAGA
GAGAATGAGACACCTCGAGCACTGGCGAACTGCTACAGTCTGGTACGTAT
GTGGGAACAGGCAGTCCCAGGGAGTGAGGAGATAGTCTTGAATACAGTTG
CACGGGAGATGGAAAGGCTCGCTAGTGAGGTATGCATTTCTATACACTGC
ACAAGTTACAAACCACAGGTGATAACACATTTGAAGAGTCCAGATCAGCA
TGACTACGAGCTCTTATCTAGCTTTCAAGCCTACCTCATCTACTCAATCT
TAATGTACTTTGGCCCTCGAGGCGGTTTCTCCGACACAATCATAATAACT
CTCATGAATATGGCATCCCAGACCGCTCGAAACGGCCTCTTCTGTGCCGC
TGAGTTAGCGCGGACCAGACCGACATGGGAATCCTGGATTGTCGCAGCCA
CGAAACGCCGTGCAATATTTACTCTCTATATTTTTAGTAACATCTATAAC
GCGGACCGTATGCTACCCAATTTCGTCGCCGAGGAGCTGAGAGGTGTCTA
TGCCCCGGGTAATAAGGCACTATGGGAAGCGGCTGATCGAGAAACGTGGA
ATAAGGAGTATGATAGATACTTATTAGATTGGCAAGATGGAAGCTTGGAA
ATATCTGAATTATGGCCATCTACGGAAATGGAGGAGCCGGAGCGGAGGAG
AAGGATCGAACGCTGGGTTCAAACAGTTGATGAGTTTGGCATGATGCTAT
ATAGTGTTTGTGCCCATATCCATGGTTCCTAA back to topCoding sequence (CDS) from alignment at ch3:1928340..1929671+ >KJC3_003442-T1 ID=KJC3_003442-T1|Name=KJC3_003442-T1|organism=Aspergillus niger KJC3|type=CDS|length=2550bp|location=Sequence derived from alignment at ch3:1928340..1929671+ (Aspergillus niger KJC3)
ATGGCTAAAAGCCAGAGTCGTCCTCCACGCAGAAAGGCATGTAGCAACTG
TATCAAGTCTAAGGTACGGTGCACTCTAGATCGACCCGCATGCTCTCGGT
GCAGGTTGACTGGCCGAACCTGCGATTATGGTACTACGACTACAGCCTTG
GAGCATCGCCACTTTCCTCGCCTACAAGAAACACATATTGGAGAAACCGA
TTCGTTAGAGAGTCAAAGTGTGCCTTCGCCTTCAGTTCCAGAACTCAGCT
CAAGAGTGTTGCAGACGCCACCATCTTTGTCATATACTCCCAGTCCTTCT
GCGAACAATACTATGTGGTGTCCGCCAAACCAGCAGGCTCAGGAACTTCC
CATCGAAGCGTTCTCAAAAGAGAAGGAATTCGACTTCGAAGCGATCAATT
TGACCCCCAGCTCAATTGCAGAGGATATTCGCGACCGGTGGCTTAGGCCC
TTTTTCCTGCCTGCGCACGGACGAAGTGAAACTCCAAAAGTCTGCCATCC
TCATACCCTACAATTTATTGCGCGGATTATGAAAACATATCCGCGATACA
TGTTGAGGGACAGACGACCCCCTCCTATTATTCACCATGTCCAGGTCAGA
GAGAATGAGACACCTCGAGCACTGGCGAACTGCTACAGTCTGGTACGTAT
GTGGGAACAGGCAGTCCCAGGGAGTGAGGAGATAGTCTTGAATACAGTTG
CACGGGAGATGGAAAGGCTCGCTAGTGAGAGTCCAGATCAGCATGACTAC
GAGCTCTTATCTAGCTTTCAAGCCTACCTCATCTACTCAATCTTAATGTA
CTTTGGCCCTCGAGGCGGTTTCTCCGACACAATCATAATAACTCTCATGA
ATATGGCATCCCAGACCGCTCGAAACGGCCTCTTCTGTGCCGCTGAGTTA
GCGCGGACCAGACCGACATGGGAATCCTGGATTGTCGCAGCCACGAAACG
CCGTGCAATATTTACTCTCTATATTTTTAGTAACATCTATAACGCGGACC
GTATGCTACCCAATTTCGTCGCCGAGGAGCTGAGAGGTGTCTATGCCCCG
GGTAATAAGGCACTATGGGAAGCGGCTGATCGAGAAACGTGGAATAAGGA
GTATGATAGATACTTATTAGATTGGCAAGATGGAAGCTTGGAAATATCTG
AATTATGGCCATCTACGGAAATGGAGGAGCCGGAGCGGAGGAGAAGGATC
GAACGCTGGGTTCAAACAGTTGATGAGTTTGGCATGATGCTATATAGTGT
TTGTGCCCATATCCATGGTTCCTAAATGGCTAAAAGCCAGAGTCGTCCTC
CACGCAGAAAGGCATGTAGCAACTGTATCAAGTCTAAGGTACGGTGCACT
CTAGATCGACCCGCATGCTCTCGGTGCAGGTTGACTGGCCGAACCTGCGA
TTATGGTACTACGACTACAGCCTTGGAGCATCGCCACTTTCCTCGCCTAC
AAGAAACACATATTGGAGAAACCGATTCGTTAGAGAGTCAAAGTGTGCCT
TCGCCTTCAGTTCCAGAACTCAGCTCAAGAGTGTTGCAGACGCCACCATC
TTTGTCATATACTCCCAGTCCTTCTGCGAACAATACTATGTGGTGTCCGC
CAAACCAGCAGGCTCAGGAACTTCCCATCGAAGCGTTCTCAAAAGAGAAG
GAATTCGACTTCGAAGCGATCAATTTGACCCCCAGCTCAATTGCAGAGGA
TATTCGCGACCGGTGGCTTAGGCCCTTTTTCCTGCCTGCGCACGGACGAA
GTGAAACTCCAAAAGTCTGCCATCCTCATACCCTACAATTTATTGCGCGG
ATTATGAAAACATATCCGCGATACATGTTGAGGGACAGACGACCCCCTCC
TATTATTCACCATGTCCAGGTCAGAGAGAATGAGACACCTCGAGCACTGG
CGAACTGCTACAGTCTGGTACGTATGTGGGAACAGGCAGTCCCAGGGAGT
GAGGAGATAGTCTTGAATACAGTTGCACGGGAGATGGAAAGGCTCGCTAG
TGAGAGTCCAGATCAGCATGACTACGAGCTCTTATCTAGCTTTCAAGCCT
ACCTCATCTACTCAATCTTAATGTACTTTGGCCCTCGAGGCGGTTTCTCC
GACACAATCATAATAACTCTCATGAATATGGCATCCCAGACCGCTCGAAA
CGGCCTCTTCTGTGCCGCTGAGTTAGCGCGGACCAGACCGACATGGGAAT
CCTGGATTGTCGCAGCCACGAAACGCCGTGCAATATTTACTCTCTATATT
TTTAGTAACATCTATAACGCGGACCGTATGCTACCCAATTTCGTCGCCGA
GGAGCTGAGAGGTGTCTATGCCCCGGGTAATAAGGCACTATGGGAAGCGG
CTGATCGAGAAACGTGGAATAAGGAGTATGATAGATACTTATTAGATTGG
CAAGATGGAAGCTTGGAAATATCTGAATTATGGCCATCTACGGAAATGGA
GGAGCCGGAGCGGAGGAGAAGGATCGAACGCTGGGTTCAAACAGTTGATG
AGTTTGGCATGATGCTATATAGTGTTTGTGCCCATATCCATGGTTCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1928340..1929671 + |
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