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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2019225..2020484+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003480-T1 ID=KJC3_003480-T1|Name=KJC3_003480-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1260bp|location=Sequence derived from alignment at ch3:2019225..2020484+ (Aspergillus niger KJC3)
ATGGTCGGCCAGACGTTCGTGCGAGATACCCCTTCCAAAAAGCTGTCTGG
TGCTGCAGCAGAAGCTGCAGCTAAGGTCAATAAGCTTCTTCTACACGATT
TCACTGTGAAGGTCAACAATAACCCTTCTACGAATTTGACGGAGTTGCTA
CAGTTCAAGCTCAAAACTTATCCCCCTCTACGTCAAAATTCCGTTGACTC
AGCTGTGGAGTCTACCTCAACGAAGAGTACTGACACCACGACTGGTACTG
CACCGGATGTAAGAGAGGAATTTCTGATTCCCTCGGATGTTGTCATCATA
CGTCCATTGAGTATGGCTGTTACTCAGGCAGTCCAGTCAGTGTCATCTTG
CGATAGCGACTCTTCCGAAATCTCGAGCGCAATTAGAGGTCTCAATGATC
TTATTTTACGCAGTGACATACTATGGCATTGGGGATCCACCGCAGTACTC
GGCCTCACCCCGAACTTGGCCCTGAAACTCGGCAATTATATCGATGTGAA
TTATCTAGCAATGGTGGAAGAAATAAAACATCAAACCCTGCGTATCCCTA
TACCAGAAATCCATGGTGTGCTGCAGCAATCAGGCACCCGATGGAAATTC
ATCTTTATGTCCCGTGTACCAGGAGTACCGCTGGATTCAATCTGGAAGAC
GTTAAACCCCCACCAGAAAGCATCTGTGCAAGACCAACTTAATGTCATGT
TCACTGATTTAAGATCACTCCCTTTTTCGCCATCCGACGAACCTGGTGCG
GTATATGGTGGGGGTACACCTCGCCGGTGTAAAGATACCAGAAGGGAAAT
CCGTGTGGCAGACGCGCCGATCAGCAATGAAAGGGAGTTCAATTGCTTCC
TATCTTTCAACCCTCGACGTACTGGAACGGGCCATCATGCGATGCTCCGA
GCATATATGGCAACTGATCACAGACTGGTCATGACTCATGCAGACCTTCA
TCCTCGAAACATCATGGTAACTCTTACCCCATGCTCACCTGGCACCAATG
AAGTCGATGGACTATGTCTACAGGCATCCACGGCCTTGGCCGGTACAGAT
GACCTACCGTCAGGGCAGGTGACGATTACAGGGATTATAGATTGGGAAAT
GTGTGGTTGGTATCCGGAATACTGGGAATACCTGAAAGCATTGAACACGC
CCTTTGGCGGGGGTGAGTTTGACGATTGGTGGAAGTACTTGCCGCCGATT
ATCGGGACCTGGCCTAGAGAGCATGCAGTCGACCTGATGTTAGATGGTTG
GTGTCGATGA back to topCoding sequence (CDS) from alignment at ch3:2019225..2020484+ >KJC3_003480-T1 ID=KJC3_003480-T1|Name=KJC3_003480-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch3:2019225..2020484+ (Aspergillus niger KJC3)
ATGGTCGGCCAGACGTTCGTGCGAGATACCCCTTCCAAAAAGCTGTCTGG
TGCTGCAGCAGAAGCTGCAGCTAAGGTCAATAAGCTTCTTCTACACGATT
TCACTGTGAAGGTCAACAATAACCCTTCTACGAATTTGACGGAGTTGCTA
CAGTTCAAGCTCAAAACTTATCCCCCTCTACGTCAAAATTCCGTTGACTC
AGCTGTGGAGTCTACCTCAACGAAGAGTACTGACACCACGACTGGTACTG
CACCGGATGTAAGAGAGGAATTTCTGATTCCCTCGGATGTTGTCATCATA
CGTCCATTGAGTATGGCTGTTACTCAGGCAGTCCAGTCAGTGTCATCTTG
CGATAGCGACTCTTCCGAAATCTCGAGCGCAATTAGAGGTCTCAATGATC
TTATTTTACGCAGTGACATACTATGGCATTGGGGATCCACCGCAGTACTC
GGCCTCACCCCGAACTTGGCCCTGAAACTCGGCAATTATATCGATGTGAA
TTATCTAGCAATGGTGGAAGAAATAAAACATCAAACCCTGCGTATCCCTA
TACCAGAAATCCATGGTGTGCTGCAGCAATCAGGCACCCGATGGAAATTC
ATCTTTATGTCCCGTGTACCAGGAGTACCGCTGGATTCAATCTGGAAGAC
GTTAAACCCCCACCAGAAAGCATCTGTGCAAGACCAACTTAATGTCATGT
TCACTGATTTAAGATCACTCCCTTTTTCGCCATCCGACGAACCTGGTGCG
GTATATGGTGGGGGTACACCTCGCCGGTGTAAAGATACCAGAAGGGAAAT
CCGTGTGGCAGACGCGCCGATCAGCAATGAAAGGGAGTTCAATTGCTTCC
TATCTTTCAACCCTCGACGTACTGGAACGGGCCATCATGCGATGCTCCGA
GCATATATGGCAACTGATCACAGACTGGTCATGACTCATGCAGACCTTCA
TCCTCGAAACATCATGGTAACTCTTACCCCATGCTCACCTGGCACCAATG
AAGTCGATGGACTATGTCTACAGGCATCCACGGCCTTGGCCGGTACAGAT
GACCTACCGTCAGGGCAGGTGACGATTACAGGGATTATAGATTGGGAAAT
GTGTGGTTGGTATCCGGAATACTGGGAATACCTGAAAGCATTGAACACGC
CCTTTGGCGGGGGTGAGTTTGACGATTGGTGGAAGTACTTGCCGCCGATT
ATCGGGACCTGGCCTAGAGAGCATGCAGTCGACCTGATGTTAGATGGTTG
GTGTCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2019225..2020484 + |
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