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KJC3_003483-T1, KJC3_003483-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003483-T1
Unique NameKJC3_003483-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2025713..2027969+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003483-T1 ID=KJC3_003483-T1|Name=KJC3_003483-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2257bp|location=Sequence derived from alignment at ch3:2025713..2027969+ (Aspergillus niger KJC3)
GTTCAGCCCGGAGCCATGGCTGTGTCCCAGCTAAGAATCAAGCGCCCTCA
CTGGCCGTGGGTCTCCCCGCTCCTCCCCTTCTTTAAGCCGCTAAGGCGCC
ACTGGCGGCTTGCAATGCGGTGAACCCAGTGACGATCGTCTGCCTTTTCC
TTCCAAAGCCCACAACAAGATGCCGTCATCAAAATCTAGTAAGTGGGGGC
GGTTTGGGTATCGGAGGCTGAGTCTCTGCTTCGTGGGTCGCCAGTTTGTC
CTCAGGATTGCCCAAAGAGTAGTAGTGCACGTGGCAAGGCATAGTTACAC
AGCGCGGGGCGAGACAAGGCTGGCTGGAGGAGGACAGCTGAGCTTGTTCA
AGGGCTAAGCTCCTCAACGAAAGCTGCTTAACCGACTTTAAGCCTCCTTT
GCCCGCGGTGAGTTAGTCAGCCTCCGCCCGGGGAGGAGGTTCTTTAACTT
CATCACAATCCTCGGTATTCCCCCTCTTATCCCCTATCGACATATTCTTA
CGGCGCAGATACCGAGAAGATGGCATCGGGAAAAGTGCCTCGCCCAAGAG
CCTCCCGCAATTGTGGAAACTGCCGGGCTGTGAAGCGACGCGTGGGTGTT
CCTGTTCTTGCTGCTTTTGTTTTTCCTCTTTCGCGGCCAAATGCTGACAG
GGGCCGATCTCGGTTCAGTGCGACCAGCAGATACCCCACTGTGGACAATG
CATCCGCTTGCGAGAAAAATGTCCGGGCTATCGCGATGAATGGGAACTCG
TTTTTCGCGACCAAACAGACAAGACCATCAAGCGATCTAAAGAGAAACGA
GCAAAACGCAGTGGCTCGACGACCTCAAGCCGCACCCCCTCCCCACCGAC
CCCTGGCTTAGGGCCCAGCCTGGACGAGATTGGTGTCAACTATTTCCTTC
ACAACTTTGTCATTAACAACCAGACTCCTTCGCGCGGATTTTTCAACTAT
ATCCCCGCGGTTTACAATGCAGAGTCGGAGCATTATACACTGGTGACCAG
CATGGCGGCGGTGGGCCTAGTAGCACTGGCCAATTCCAACCAACAGCCCG
AACTGGCCCGGCACGCACGCATCAAATACTCCGAGGCAATAGCGAATGTC
AACACGGCATTGGCATCACCTGTTGATTCGGTCAAAGACAGCACCCTGAT
GTCAGTGATCTCGTTAGGGGTGTTTGAGCACGTCACCAATTTCCAGTCGT
GGGTACGACATGTCCGAGGAGCTGCCACGCTAGTGGTCCTCCGTGGCAAG
AGCCAATTTACCAGTACAGCCGCAACACTCATGTTCAATCAAGTACGCGC
AGATACGGTGATCACTTGTCTGCACGGTAATCAGCCGTTCCCAGAGGACT
TGCTTGCGCTGCAGGGAGAGGCGGCCAAGCACGCCGATGCCTATAGTCCG
TTCTGGCTCCTCGGAGTATCAGCCACCAAGTGTGTAAACCTCCTCTACAG
CGTCACACAAAATAAATCGAAAATCTCGTGGTCGGAGAAACTGGAAGAAG
CGATCATTCTCCAGGAAGAGTTTCGGCGCATCTTTGAAATTATCAGCCTC
GCAGACCCATACACAACCGTCCATGAGCCAACAGCAGACCCCGAAATCAT
CCACGATAGCCGATTCGACGTCTACCAATCTACCTGGGCAATACGAGTCT
GGAACAATGCGCGATCCATCCGGATGATCGTCTCTGAGATTTTATACTCC
ATCTTAATGAAAGTTTTGGCCACCGATCTTCCTGCAACTATGCGAATGAC
CCTGGAAGCGAAGTTCCAAGAGACAATACAAATCATGACAAGCCTCGGGG
AGGACATGCTGGCCACTGTCCCACAGATGCTGGGCTATGTGTCACTCGTA
GGTGGGCAACATATCTCTTACAATTCAACCTCGACCGCCAGCGTGCCAGG
CGGTTATTCTCTCATCTGGACCCTTTATATGGTTGGGAAGTCACCCGTCA
CCAAATGCAAATCCCGCAAGTGGGTCATCCGCCGTCTTCAGGAGATTGGC
CAAAACGCAGGTTTCGCAATGGCCTTACAACTTCTGGAGGGCGTGATGAA
GATCGACCAACTGAGCGAAGCGTCTGTCCAGCGGACAAGGCCGTACTTTG
AGCCGACTCGCATATAAAAGGTAGGGACCAAGTGATCCTTTGCCATTTTG
TAGCCACGTGACATAAGCCCCGGCGTCAGTCTTTACCTTTTTGGCTTATC
GATTTATGCCTGGCGCATGCTTCATAGCCACGATGCAGATATGTTGTTCT
ATATCAA
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Coding sequence (CDS) from alignment at ch3:2025713..2027969+

>KJC3_003483-T1 ID=KJC3_003483-T1|Name=KJC3_003483-T1|organism=Aspergillus niger KJC3|type=CDS|length=3042bp|location=Sequence derived from alignment at ch3:2025713..2027969+ (Aspergillus niger KJC3)
ATGGCATCGGGAAAAGTGCCTCGCCCAAGAGCCTCCCGCAATTGTGGAAA
CTGCCGGGCTGTGAAGCGACGCTGCGACCAGCAGATACCCCACTGTGGAC
AATGCATCCGCTTGCGAGAAAAATGTCCGGGCTATCGCGATGAATGGGAA
CTCGTTTTTCGCGACCAAACAGACAAGACCATCAAGCGATCTAAAGAGAA
ACGAGCAAAACGCAGTGGCTCGACGACCTCAAGCCGCACCCCCTCCCCAC
CGACCCCTGGCTTAGGGCCCAGCCTGGACGAGATTGGTGTCAACTATTTC
CTTCACAACTTTGTCATTAACAACCAGACTCCTTCGCGCGGATTTTTCAA
CTATATCCCCGCGGTTTACAATGCAGAGTCGGAGCATTATACACTGGTGA
CCAGCATGGCGGCGGTGGGCCTAGTAGCACTGGCCAATTCCAACCAACAG
CCCGAACTGGCCCGGCACGCACGCATCAAATACTCCGAGGCAATAGCGAA
TGTCAACACGGCATTGGCATCACCTGTTGATTCGGTCAAAGACAGCACCC
TGATGTCAGTGATCTCGTTAGGGGTGTTTGAGCACGTCACCAATTTCCAG
TCGTGGGTACGACATGTCCGAGGAGCTGCCACGCTAGTGGTCCTCCGTGG
CAAGAGCCAATTTACCAGTACAGCCGCAACACTCATGTTCAATCAAGTAC
GCGCAGATACGGTGATCACTTGTCTGCACGGTAATCAGCCGTTCCCAGAG
GACTTGCTTGCGCTGCAGGGAGAGGCGGCCAAGCACGCCGATGCCTATAG
TCCGTTCTGGCTCCTCGGAGTATCAGCCACCAAGTGTGTAAACCTCCTCT
ACAGCGTCACACAAAATAAATCGAAAATCTCGTGGTCGGAGAAACTGGAA
GAAGCGATCATTCTCCAGGAAGAGTTTCGGCGCATCTTTGAAATTATCAG
CCTCGCAGACCCATACACAACCGTCCATGAGCCAACAGCAGACCCCGAAA
TCATCCACGATAGCCGATTCGACGTCTACCAATCTACCTGGGCAATACGA
GTCTGGAACAATGCGCGATCCATCCGGATGATCGTCTCTGAGATTTTATA
CTCCATCTTAATGAAAGTTTTGGCCACCGATCTTCCTGCAACTATGCGAA
TGACCCTGGAAGCGAAGTTCCAAGAGACAATACAAATCATGACAAGCCTC
GGGGAGGACATGCTGGCCACTGTCCCACAGATGCTGGGCTATGTGTCACT
CGTAGGTGGGCAACATATCTCTTACAATTCAACCTCGACCGCCAGCGTGC
CAGGCGGTTATTCTCTCATCTGGACCCTTTATATGGTTGGGAAGTCACCC
GTCACCAAATGCAAATCCCGCAAGTGGGTCATCCGCCGTCTTCAGGAGAT
TGGCCAAAACGCAGGTTTCGCAATGGCCTTACAACTTCTGGAGGGCGTGA
TGAAGATCGACCAACTGAGCGAAGCGTCTGTCCAGCGGACAAGGCCGTAC
TTTGAGCCGACTCGCATATAAATGGCATCGGGAAAAGTGCCTCGCCCAAG
AGCCTCCCGCAATTGTGGAAACTGCCGGGCTGTGAAGCGACGCTGCGACC
AGCAGATACCCCACTGTGGACAATGCATCCGCTTGCGAGAAAAATGTCCG
GGCTATCGCGATGAATGGGAACTCGTTTTTCGCGACCAAACAGACAAGAC
CATCAAGCGATCTAAAGAGAAACGAGCAAAACGCAGTGGCTCGACGACCT
CAAGCCGCACCCCCTCCCCACCGACCCCTGGCTTAGGGCCCAGCCTGGAC
GAGATTGGTGTCAACTATTTCCTTCACAACTTTGTCATTAACAACCAGAC
TCCTTCGCGCGGATTTTTCAACTATATCCCCGCGGTTTACAATGCAGAGT
CGGAGCATTATACACTGGTGACCAGCATGGCGGCGGTGGGCCTAGTAGCA
CTGGCCAATTCCAACCAACAGCCCGAACTGGCCCGGCACGCACGCATCAA
ATACTCCGAGGCAATAGCGAATGTCAACACGGCATTGGCATCACCTGTTG
ATTCGGTCAAAGACAGCACCCTGATGTCAGTGATCTCGTTAGGGGTGTTT
GAGCACGTCACCAATTTCCAGTCGTGGGTACGACATGTCCGAGGAGCTGC
CACGCTAGTGGTCCTCCGTGGCAAGAGCCAATTTACCAGTACAGCCGCAA
CACTCATGTTCAATCAAGTACGCGCAGATACGGTGATCACTTGTCTGCAC
GGTAATCAGCCGTTCCCAGAGGACTTGCTTGCGCTGCAGGGAGAGGCGGC
CAAGCACGCCGATGCCTATAGTCCGTTCTGGCTCCTCGGAGTATCAGCCA
CCAAGTGTGTAAACCTCCTCTACAGCGTCACACAAAATAAATCGAAAATC
TCGTGGTCGGAGAAACTGGAAGAAGCGATCATTCTCCAGGAAGAGTTTCG
GCGCATCTTTGAAATTATCAGCCTCGCAGACCCATACACAACCGTCCATG
AGCCAACAGCAGACCCCGAAATCATCCACGATAGCCGATTCGACGTCTAC
CAATCTACCTGGGCAATACGAGTCTGGAACAATGCGCGATCCATCCGGAT
GATCGTCTCTGAGATTTTATACTCCATCTTAATGAAAGTTTTGGCCACCG
ATCTTCCTGCAACTATGCGAATGACCCTGGAAGCGAAGTTCCAAGAGACA
ATACAAATCATGACAAGCCTCGGGGAGGACATGCTGGCCACTGTCCCACA
GATGCTGGGCTATGTGTCACTCGTAGGTGGGCAACATATCTCTTACAATT
CAACCTCGACCGCCAGCGTGCCAGGCGGTTATTCTCTCATCTGGACCCTT
TATATGGTTGGGAAGTCACCCGTCACCAAATGCAAATCCCGCAAGTGGGT
CATCCGCCGTCTTCAGGAGATTGGCCAAAACGCAGGTTTCGCAATGGCCT
TACAACTTCTGGAGGGCGTGATGAAGATCGACCAACTGAGCGAAGCGTCT
GTCCAGCGGACAAGGCCGTACTTTGAGCCGACTCGCATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003483KJC3_003483Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003483-T1.utr5p1KJC3_003483-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003483-T1.exon1KJC3_003483-T1.exon1Aspergillus niger KJC3exon
KJC3_003483-T1.exon2KJC3_003483-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003483-T1.cdsKJC3_003483-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003483-T1.utr3p1KJC3_003483-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003483-T1KJC3_003483-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2025713..2027969 +
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