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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2119790..2121501- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003506-T1 ID=KJC3_003506-T1|Name=KJC3_003506-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1712bp|location=Sequence derived from alignment at ch3:2119790..2121501- (Aspergillus niger KJC3)
GAACTGGGTTTGATGCAGTCCGCGCAGATCTGTCTCTACTGTTTAGTTCG
GACTGCCCAGCACTCTCAGGCCTGTTACCATAGTGTTTGCGATCTCTGTC
CGCAACTTTTTGGAATAGCTGCACTTGACACTGAGTACCGATTCATATTA
CCAGTGTGCTATCTTTGCCATTCTCGAGTGCCTATGGCTATCGATGTTTT
GCCTCCCACCATGAATCCGACACTGTTGGCCATCGATGGTGGAGGCGTTC
GAGCAGGGATACCGTTGGAGTATCTCCTACTGATTCAGGAAGCCCTGGGG
ACGGAATGTAGGGTGCGGGATCTTGTTGACCTATCAGTAGGGCCTAGTGC
AGGTAAGGTTCGCCTAAACATTATTAGGGTACCAGATGCTCGGGACTGAC
CCATCCCGATGCCATGACCCTTCTCATTTCCGATGTGGCTCGGCCGGACG
GAGCACTGACACAGACAGGAGGCTTACTGGTCTTGGGATTGATTGCTATG
GAGTGGGATATTGCAACCTGCTCTGAGACTTTTGATCTTCTCGCACGGCG
TATCTTCCGCGAGCGTCGACAGCCCGCCATATCTTCTCTTCTTCGATTTC
TCTTGGGAAAGAATTCTATTTTGGGGAATATTCCGAGATGGCTATCTTGG
TTCTTACACGATAGTTGCTATGACCCAAGACTTTTCGACACCAGCTTGCA
GGAAGCATACGGTAGCAGCAGGCGTATTTCCGACACCGTAACCAACGGCT
CTCAGGTACTCCACTCACAGTCGAAATTCGGTGTTATTGCTGCCAACATT
GCCAAGGATACAAGATCTTTCGTGTTTGGTAATTTTAATGCAGTAGATTG
GTATGAGAATGGCTATGGTAAGTAGCTCTAGTCTTTCTCTCTATTTGGTA
AACTAACTATCACAATTAGACTATGAGCTATTCCGGGCTAGTAGTAGGGA
AATGGAACCCCGCATTTGTGATGTGTAAGCACCTGCTACAAATCATAACT
ATAGTCTCTAACTTACTAAATATATATAGAGCCAGAGCTACTGCTGCCGC
ACCCTTGTGAGTCTACCTCATTTCCCCTTAGACTAGCAGCTTGAACTCGT
AGTCCGGTTGCCCATTCATATAATCCTTGTCAAGGAGTGGACATAGCTAA
TCCTTCTGCCAAATATGGTATAGCCTTTTCCCTACGGCGGAACTCCGGGT
TGGTTCCTTCCAGGATGGTGGCCTCCAAGACAACTTTGCCGCCGGGATAG
CAGGCAGGATTTGTCGCCGTATTTGGCCTTCCAGACTAGGCGTTGCGCGG
GTAATCTCGCTGGGTACTGGAGAAGACGTGCCTTCAACTGATCGGTCACC
ACGTTTCCGTCATGTGTTCCGGGACGGCTTCCTCCGGAGGGGTTTTGATG
CATTCATGTCTAGCCTCGGAACCAAGTCCAAGTGGTTGCAACTGGTCGAT
CGACTTGATGAAGCAACCAAACCCGATTATATCCGGATGGATGTGGCTCT
CGACAACCTCCCTTGCACTATTGATGATTTAGAAGTCATGGATGATTATC
GCAACCTGGTAATCCTCCAGCCGGGGAGTGCTCGACTAGCGCGGGCAACT
GCAACAGCCATGCTTGTTGCTCGCTTCTACTTTGTGCTAGAGCGCCTTGA
AGAAGTGGGTAACGGGACAAAATACTTATGCTATGGCAGAATAAAATGTA
AAGGGCCAGTGA back to topCoding sequence (CDS) from alignment at ch3:2119790..2121501- >KJC3_003506-T1 ID=KJC3_003506-T1|Name=KJC3_003506-T1|organism=Aspergillus niger KJC3|type=CDS|length=7848bp|location=Sequence derived from alignment at ch3:2119790..2121501- (Aspergillus niger KJC3)
GGCCAGTGACCTTTTCCCTACGGCGGAACTCCGGGTTGGTTCCTTCCAGG
ATGGTGGCCTCCAAGACAACTTTGCCGCCGGGATAGCAGGCAGGATTTGT
CGCCGTATTTGGCCTTCCAGACTAGGCGTTGCGCGGGTAATCTCGCTGGG
TACTGGAGAAGACGTGCCTTCAACTGATCGGTCACCACGTTTCCGTCATG
TGTTCCGGGACGGCTTCCTCCGGAGGGGTTTTGATGCATTCATGTCTAGC
CTCGGAACCAAGTCCAAGTGGTTGCAACTGGTCGATCGACTTGATGAAGC
AACCAAACCCGATTATATCCGGATGGATGTGGCTCTCGACAACCTCCCTT
GCACTATTGATGATTTAGAAGTCATGGATGATTATCGCAACCTGGTAATC
CTCCAGCCGGGGAGTGCTCGACTAGCGCGGGCAACTGCAACAGCCATGCT
TGTTGCTCGCTTCTACTTTGTGCTAGAGCGCCTTGAAGAAAGCCAGAGCT
ACTGCTGCCGCACCCTTACTATGAGCTATTCCGGGCTAGTAGTAGGGAAA
TGGAACCCCGCATTTGTGATGTGCTTACTGGTCTTGGGATTGATTGCTAT
GGAGTGGGATATTGCAACCTGCTCTGAGACTTTTGATCTTCTCGCACGGC
GTATCTTCCGCGAGCGTCGACAGCCCGCCATATCTTCTCTTCTTCGATTT
CTCTTGGGAAAGAATTCTATTTTGGGGAATATTCCGAGATGGCTATCTTG
GTTCTTACACGATAGTTGCTATGACCCAAGACTTTTCGACACCAGCTTGC
AGGAAGCATACGGTAGCAGCAGGCGTATTTCCGACACCGTAACCAACGGC
TCTCAGGTACTCCACTCACAGTCGAAATTCGGTGTTATTGCTGCCAACAT
TGCCAAGGATACAAGATCTTTCGTGTTTGGTAATTTTAATGCAGTAGATT
GGTATGAGAATGGCTATGATGCAGTCCGCGCAGATCTGTCTCTACTGTTT
AGTTCGGACTGCCCAGCACTCTCAGGCCTGTTACCATAGTGTTTGCGATC
TCTGTCCGCAACTTTTTGGAATAGCTGCACTTGACACTGAGTACCGATTC
ATATTACCAGTGTGCTATCTTTGCCATTCTCGAGTGCCTATGGCTATCGA
TGTTTTGCCTCCCACCATGAATCCGACACTGTTGGCCATCGATGGTGGAG
GCGTTCGAGCAGGGATACCGTTGGAGTATCTCCTACTGATTCAGGAAGCC
CTGGGGACGGAATGTAGGGTGCGGGATCTTGTTGACCTATCAGTAGGGCC
TAGTGCAGGGCCAGTGACCTTTTCCCTACGGCGGAACTCCGGGTTGGTTC
CTTCCAGGATGGTGGCCTCCAAGACAACTTTGCCGCCGGGATAGCAGGCA
GGATTTGTCGCCGTATTTGGCCTTCCAGACTAGGCGTTGCGCGGGTAATC
TCGCTGGGTACTGGAGAAGACGTGCCTTCAACTGATCGGTCACCACGTTT
CCGTCATGTGTTCCGGGACGGCTTCCTCCGGAGGGGTTTTGATGCATTCA
TGTCTAGCCTCGGAACCAAGTCCAAGTGGTTGCAACTGGTCGATCGACTT
GATGAAGCAACCAAACCCGATTATATCCGGATGGATGTGGCTCTCGACAA
CCTCCCTTGCACTATTGATGATTTAGAAGTCATGGATGATTATCGCAACC
TGGTAATCCTCCAGCCGGGGAGTGCTCGACTAGCGCGGGCAACTGCAACA
GCCATGCTTGTTGCTCGCTTCTACTTTGTGCTAGAGCGCCTTGAAGAAAG
CCAGAGCTACTGCTGCCGCACCCTTACTATGAGCTATTCCGGGCTAGTAG
TAGGGAAATGGAACCCCGCATTTGTGATGTGCTTACTGGTCTTGGGATTG
ATTGCTATGGAGTGGGATATTGCAACCTGCTCTGAGACTTTTGATCTTCT
CGCACGGCGTATCTTCCGCGAGCGTCGACAGCCCGCCATATCTTCTCTTC
TTCGATTTCTCTTGGGAAAGAATTCTATTTTGGGGAATATTCCGAGATGG
CTATCTTGGTTCTTACACGATAGTTGCTATGACCCAAGACTTTTCGACAC
CAGCTTGCAGGAAGCATACGGTAGCAGCAGGCGTATTTCCGACACCGTAA
CCAACGGCTCTCAGGTACTCCACTCACAGTCGAAATTCGGTGTTATTGCT
GCCAACATTGCCAAGGATACAAGATCTTTCGTGTTTGGTAATTTTAATGC
AGTAGATTGGTATGAGAATGGCTATGATGCAGTCCGCGCAGATCTGTCTC
TACTGTTTAGTTCGGACTGCCCAGCACTCTCAGGCCTGTTACCATAGTGT
TTGCGATCTCTGTCCGCAACTTTTTGGAATAGCTGCACTTGACACTGAGT
ACCGATTCATATTACCAGTGTGCTATCTTTGCCATTCTCGAGTGCCTATG
GCTATCGATGTTTTGCCTCCCACCATGAATCCGACACTGTTGGCCATCGA
TGGTGGAGGCGTTCGAGCAGGGATACCGTTGGAGTATCTCCTACTGATTC
AGGAAGCCCTGGGGACGGAATGTAGGGTGCGGGATCTTGTTGACCTATCA
GTAGGGCCTAGTGCAGGGCCAGTGACCTTTTCCCTACGGCGGAACTCCGG
GTTGGTTCCTTCCAGGATGGTGGCCTCCAAGACAACTTTGCCGCCGGGAT
AGCAGGCAGGATTTGTCGCCGTATTTGGCCTTCCAGACTAGGCGTTGCGC
GGGTAATCTCGCTGGGTACTGGAGAAGACGTGCCTTCAACTGATCGGTCA
CCACGTTTCCGTCATGTGTTCCGGGACGGCTTCCTCCGGAGGGGTTTTGA
TGCATTCATGTCTAGCCTCGGAACCAAGTCCAAGTGGTTGCAACTGGTCG
ATCGACTTGATGAAGCAACCAAACCCGATTATATCCGGATGGATGTGGCT
CTCGACAACCTCCCTTGCACTATTGATGATTTAGAAGTCATGGATGATTA
TCGCAACCTGGTAATCCTCCAGCCGGGGAGTGCTCGACTAGCGCGGGCAA
CTGCAACAGCCATGCTTGTTGCTCGCTTCTACTTTGTGCTAGAGCGCCTT
GAAGAAAGCCAGAGCTACTGCTGCCGCACCCTTACTATGAGCTATTCCGG
GCTAGTAGTAGGGAAATGGAACCCCGCATTTGTGATGTGCTTACTGGTCT
TGGGATTGATTGCTATGGAGTGGGATATTGCAACCTGCTCTGAGACTTTT
GATCTTCTCGCACGGCGTATCTTCCGCGAGCGTCGACAGCCCGCCATATC
TTCTCTTCTTCGATTTCTCTTGGGAAAGAATTCTATTTTGGGGAATATTC
CGAGATGGCTATCTTGGTTCTTACACGATAGTTGCTATGACCCAAGACTT
TTCGACACCAGCTTGCAGGAAGCATACGGTAGCAGCAGGCGTATTTCCGA
CACCGTAACCAACGGCTCTCAGGTACTCCACTCACAGTCGAAATTCGGTG
TTATTGCTGCCAACATTGCCAAGGATACAAGATCTTTCGTGTTTGGTAAT
TTTAATGCAGTAGATTGGTATGAGAATGGCTATGATGCAGTCCGCGCAGA
TCTGTCTCTACTGTTTAGTTCGGACTGCCCAGCACTCTCAGGCCTGTTAC
CATAGTGTTTGCGATCTCTGTCCGCAACTTTTTGGAATAGCTGCACTTGA
CACTGAGTACCGATTCATATTACCAGTGTGCTATCTTTGCCATTCTCGAG
TGCCTATGGCTATCGATGTTTTGCCTCCCACCATGAATCCGACACTGTTG
GCCATCGATGGTGGAGGCGTTCGAGCAGGGATACCGTTGGAGTATCTCCT
ACTGATTCAGGAAGCCCTGGGGACGGAATGTAGGGTGCGGGATCTTGTTG
ACCTATCAGTAGGGCCTAGTGCAGGGCCAGTGACCTTTTCCCTACGGCGG
AACTCCGGGTTGGTTCCTTCCAGGATGGTGGCCTCCAAGACAACTTTGCC
GCCGGGATAGCAGGCAGGATTTGTCGCCGTATTTGGCCTTCCAGACTAGG
CGTTGCGCGGGTAATCTCGCTGGGTACTGGAGAAGACGTGCCTTCAACTG
ATCGGTCACCACGTTTCCGTCATGTGTTCCGGGACGGCTTCCTCCGGAGG
GGTTTTGATGCATTCATGTCTAGCCTCGGAACCAAGTCCAAGTGGTTGCA
ACTGGTCGATCGACTTGATGAAGCAACCAAACCCGATTATATCCGGATGG
ATGTGGCTCTCGACAACCTCCCTTGCACTATTGATGATTTAGAAGTCATG
GATGATTATCGCAACCTGGTAATCCTCCAGCCGGGGAGTGCTCGACTAGC
GCGGGCAACTGCAACAGCCATGCTTGTTGCTCGCTTCTACTTTGTGCTAG
AGCGCCTTGAAGAAAGCCAGAGCTACTGCTGCCGCACCCTTACTATGAGC
TATTCCGGGCTAGTAGTAGGGAAATGGAACCCCGCATTTGTGATGTGCTT
ACTGGTCTTGGGATTGATTGCTATGGAGTGGGATATTGCAACCTGCTCTG
AGACTTTTGATCTTCTCGCACGGCGTATCTTCCGCGAGCGTCGACAGCCC
GCCATATCTTCTCTTCTTCGATTTCTCTTGGGAAAGAATTCTATTTTGGG
GAATATTCCGAGATGGCTATCTTGGTTCTTACACGATAGTTGCTATGACC
CAAGACTTTTCGACACCAGCTTGCAGGAAGCATACGGTAGCAGCAGGCGT
ATTTCCGACACCGTAACCAACGGCTCTCAGGTACTCCACTCACAGTCGAA
ATTCGGTGTTATTGCTGCCAACATTGCCAAGGATACAAGATCTTTCGTGT
TTGGTAATTTTAATGCAGTAGATTGGTATGAGAATGGCTATGATGCAGTC
CGCGCAGATCTGTCTCTACTGTTTAGTTCGGACTGCCCAGCACTCTCAGG
CCTGTTACCATAGTGTTTGCGATCTCTGTCCGCAACTTTTTGGAATAGCT
GCACTTGACACTGAGTACCGATTCATATTACCAGTGTGCTATCTTTGCCA
TTCTCGAGTGCCTATGGCTATCGATGTTTTGCCTCCCACCATGAATCCGA
CACTGTTGGCCATCGATGGTGGAGGCGTTCGAGCAGGGATACCGTTGGAG
TATCTCCTACTGATTCAGGAAGCCCTGGGGACGGAATGTAGGGTGCGGGA
TCTTGTTGACCTATCAGTAGGGCCTAGTGCAGGGCCAGTGACCTTTTCCC
TACGGCGGAACTCCGGGTTGGTTCCTTCCAGGATGGTGGCCTCCAAGACA
ACTTTGCCGCCGGGATAGCAGGCAGGATTTGTCGCCGTATTTGGCCTTCC
AGACTAGGCGTTGCGCGGGTAATCTCGCTGGGTACTGGAGAAGACGTGCC
TTCAACTGATCGGTCACCACGTTTCCGTCATGTGTTCCGGGACGGCTTCC
TCCGGAGGGGTTTTGATGCATTCATGTCTAGCCTCGGAACCAAGTCCAAG
TGGTTGCAACTGGTCGATCGACTTGATGAAGCAACCAAACCCGATTATAT
CCGGATGGATGTGGCTCTCGACAACCTCCCTTGCACTATTGATGATTTAG
AAGTCATGGATGATTATCGCAACCTGGTAATCCTCCAGCCGGGGAGTGCT
CGACTAGCGCGGGCAACTGCAACAGCCATGCTTGTTGCTCGCTTCTACTT
TGTGCTAGAGCGCCTTGAAGAAAGCCAGAGCTACTGCTGCCGCACCCTTA
CTATGAGCTATTCCGGGCTAGTAGTAGGGAAATGGAACCCCGCATTTGTG
ATGTGCTTACTGGTCTTGGGATTGATTGCTATGGAGTGGGATATTGCAAC
CTGCTCTGAGACTTTTGATCTTCTCGCACGGCGTATCTTCCGCGAGCGTC
GACAGCCCGCCATATCTTCTCTTCTTCGATTTCTCTTGGGAAAGAATTCT
ATTTTGGGGAATATTCCGAGATGGCTATCTTGGTTCTTACACGATAGTTG
CTATGACCCAAGACTTTTCGACACCAGCTTGCAGGAAGCATACGGTAGCA
GCAGGCGTATTTCCGACACCGTAACCAACGGCTCTCAGGTACTCCACTCA
CAGTCGAAATTCGGTGTTATTGCTGCCAACATTGCCAAGGATACAAGATC
TTTCGTGTTTGGTAATTTTAATGCAGTAGATTGGTATGAGAATGGCTATG
ATGCAGTCCGCGCAGATCTGTCTCTACTGTTTAGTTCGGACTGCCCAGCA
CTCTCAGGCCTGTTACCATAGTGTTTGCGATCTCTGTCCGCAACTTTTTG
GAATAGCTGCACTTGACACTGAGTACCGATTCATATTACCAGTGTGCTAT
CTTTGCCATTCTCGAGTGCCTATGGCTATCGATGTTTTGCCTCCCACCAT
GAATCCGACACTGTTGGCCATCGATGGTGGAGGCGTTCGAGCAGGGATAC
CGTTGGAGTATCTCCTACTGATTCAGGAAGCCCTGGGGACGGAATGTAGG
GTGCGGGATCTTGTTGACCTATCAGTAGGGCCTAGTGCAGGGCCAGTGAC
CTTTTCCCTACGGCGGAACTCCGGGTTGGTTCCTTCCAGGATGGTGGCCT
CCAAGACAACTTTGCCGCCGGGATAGCAGGCAGGATTTGTCGCCGTATTT
GGCCTTCCAGACTAGGCGTTGCGCGGGTAATCTCGCTGGGTACTGGAGAA
GACGTGCCTTCAACTGATCGGTCACCACGTTTCCGTCATGTGTTCCGGGA
CGGCTTCCTCCGGAGGGGTTTTGATGCATTCATGTCTAGCCTCGGAACCA
AGTCCAAGTGGTTGCAACTGGTCGATCGACTTGATGAAGCAACCAAACCC
GATTATATCCGGATGGATGTGGCTCTCGACAACCTCCCTTGCACTATTGA
TGATTTAGAAGTCATGGATGATTATCGCAACCTGGTAATCCTCCAGCCGG
GGAGTGCTCGACTAGCGCGGGCAACTGCAACAGCCATGCTTGTTGCTCGC
TTCTACTTTGTGCTAGAGCGCCTTGAAGAAAGCCAGAGCTACTGCTGCCG
CACCCTTACTATGAGCTATTCCGGGCTAGTAGTAGGGAAATGGAACCCCG
CATTTGTGATGTGCTTACTGGTCTTGGGATTGATTGCTATGGAGTGGGAT
ATTGCAACCTGCTCTGAGACTTTTGATCTTCTCGCACGGCGTATCTTCCG
CGAGCGTCGACAGCCCGCCATATCTTCTCTTCTTCGATTTCTCTTGGGAA
AGAATTCTATTTTGGGGAATATTCCGAGATGGCTATCTTGGTTCTTACAC
GATAGTTGCTATGACCCAAGACTTTTCGACACCAGCTTGCAGGAAGCATA
CGGTAGCAGCAGGCGTATTTCCGACACCGTAACCAACGGCTCTCAGGTAC
TCCACTCACAGTCGAAATTCGGTGTTATTGCTGCCAACATTGCCAAGGAT
ACAAGATCTTTCGTGTTTGGTAATTTTAATGCAGTAGATTGGTATGAGAA
TGGCTATGATGCAGTCCGCGCAGATCTGTCTCTACTGTTTAGTTCGGACT
GCCCAGCACTCTCAGGCCTGTTACCATAGTGTTTGCGATCTCTGTCCGCA
ACTTTTTGGAATAGCTGCACTTGACACTGAGTACCGATTCATATTACCAG
TGTGCTATCTTTGCCATTCTCGAGTGCCTATGGCTATCGATGTTTTGCCT
CCCACCATGAATCCGACACTGTTGGCCATCGATGGTGGAGGCGTTCGAGC
AGGGATACCGTTGGAGTATCTCCTACTGATTCAGGAAGCCCTGGGGACGG
AATGTAGGGTGCGGGATCTTGTTGACCTATCAGTAGGGCCTAGTGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003506-T1.utr5p1 | KJC3_003506-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016035 |
| DBxref | InterPro:IPR002641 |
| DBxref | PFAM:PF01734 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2119790..2121501 - |
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