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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2186156..2187201+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003530-T1 ID=KJC3_003530-T1|Name=KJC3_003530-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1046bp|location=Sequence derived from alignment at ch3:2186156..2187201+ (Aspergillus niger KJC3)
CACTTGACTACCATCATGGCTCCAACCATCCTCATCGTCGGCGCAACGGG
CAACACCGGCCGAGCCGTAACAGAAACTCTTCCAACCCTTCTGAAAGCCA
ATGAGAATTTCAAGAACCATCGAGTACTTGCCCTGACAAGATCTCTCACT
AGCTCTTCGGCCCAACTGATTGCAAAAATCCCCGGCGTCCAAATCATCGA
AAAGAACTGGACCGATATTACCTCCGACTGGCTCCGAGAACATGAAGTCG
TCCGAGCCTTCATCGCATCTCACAATGCACCAAATCAGTTTGCCGAGGAG
TCTGCCTTCCACGTCGCCGCCCTTGGAGCTGGTGTCGAATACGTTGTGCG
CATTTCCACCACCGCACCGAATGTTCGTCCGGATTATGCTGCCTACTACC
CGCGGAGCCACTGGGCTATTGAGGCGATGCTTGGTTCGGCGGAATTCAGC
GCTTTGAAATGGACTTCCCTTCAGCCAAACGTGTTTCTAAATTTCTACAT
GGCCCTCGTCGCTGAGTACATCAAGCAATATAAGCGGACTGGCGAACTGG
GTCCGCTGAAGCTGATGGCATCCAAAGATGCCCCTGTTGCGCCTATCCAC
CCAGATGAAGTCGGCGTGTTTGCTGCTCATCTCCTGGCCTTGGATAATCC
TAGCCCACGCAGCGGGGCAAAGTATGTCTTGAATGGACCGGAAGATATCA
CTGGCGAACAGCTTGTCGGCTTAGTGGAGCAACATATTGATACGAAGGTG
AAGGATGTGGAATACCAAGATCTGAGCTTTTTGGATGCGATGCTAGGCAG
TCAATATGAAGGATCGGGTGAATCTATGACTGTTATAAAGTCAATAAAGT
ATGCACCGTTGACCATGTGGGAAGGGAAGTGCAATGCTTCGACGACTAGC
AAGGAGGTTTTGGACATTGCTCCTCCGAGACGGACGCCCACCGAGGTGCT
GGAGGATTTGCTGAAGGCATAAGGATCAAGGGTCAATTGTGAAACCCTGA
GGCGCTACAATCAGAAAGGGAGCGGGTAGATTAGTTTTATTTAAAG back to topCoding sequence (CDS) from alignment at ch3:2186156..2187201+ >KJC3_003530-T1 ID=KJC3_003530-T1|Name=KJC3_003530-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at ch3:2186156..2187201+ (Aspergillus niger KJC3)
ATGGCTCCAACCATCCTCATCGTCGGCGCAACGGGCAACACCGGCCGAGC
CGTAACAGAAACTCTTCCAACCCTTCTGAAAGCCAATGAGAATTTCAAGA
ACCATCGAGTACTTGCCCTGACAAGATCTCTCACTAGCTCTTCGGCCCAA
CTGATTGCAAAAATCCCCGGCGTCCAAATCATCGAAAAGAACTGGACCGA
TATTACCTCCGACTGGCTCCGAGAACATGAAGTCGTCCGAGCCTTCATCG
CATCTCACAATGCACCAAATCAGTTTGCCGAGGAGTCTGCCTTCCACGTC
GCCGCCCTTGGAGCTGGTGTCGAATACGTTGTGCGCATTTCCACCACCGC
ACCGAATGTTCGTCCGGATTATGCTGCCTACTACCCGCGGAGCCACTGGG
CTATTGAGGCGATGCTTGGTTCGGCGGAATTCAGCGCTTTGAAATGGACT
TCCCTTCAGCCAAACGTGTTTCTAAATTTCTACATGGCCCTCGTCGCTGA
GTACATCAAGCAATATAAGCGGACTGGCGAACTGGGTCCGCTGAAGCTGA
TGGCATCCAAAGATGCCCCTGTTGCGCCTATCCACCCAGATGAAGTCGGC
GTGTTTGCTGCTCATCTCCTGGCCTTGGATAATCCTAGCCCACGCAGCGG
GGCAAAGTATGTCTTGAATGGACCGGAAGATATCACTGGCGAACAGCTTG
TCGGCTTAGTGGAGCAACATATTGATACGAAGGTGAAGGATGTGGAATAC
CAAGATCTGAGCTTTTTGGATGCGATGCTAGGCAGTCAATATGAAGGATC
GGGTGAATCTATGACTGTTATAAAGTCAATAAAGTATGCACCGTTGACCA
TGTGGGAAGGGAAGTGCAATGCTTCGACGACTAGCAAGGAGGTTTTGGAC
ATTGCTCCTCCGAGACGGACGCCCACCGAGGTGCTGGAGGATTTGCTGAA
GGCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003530-T1.utr5p1 | KJC3_003530-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003530-T1.utr3p1 | KJC3_003530-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2186156..2187201 + |
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