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KJC3_003545-T2, KJC3_003545-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003545-T2
Unique NameKJC3_003545-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2221627..2224771+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003545-T2 ID=KJC3_003545-T2|Name=KJC3_003545-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3145bp|location=Sequence derived from alignment at ch3:2221627..2224771+ (Aspergillus niger KJC3)
CTTTACTTCATCCCCTCGCCTATTTTCCATGCCATGCCATCATCAACTCA
TTGGCATTTGTCAGTTCCATCTCTATTCAATCATGGCTATAACCGGTACA
GCTCATAAACCATGCTACAGCACAGAAAACCTTCAATACGAATAGATGCT
CTCAATATTCTTAGTTCGTCAAAATGGAAACTTCTTCTATTCTATACAAT
CTACCCTGCCTATGATCGTGCTACCTCAAACTCTGCCATATACCAGTTCT
GAATAGCTTTGGTGTCGCCTGTGATAGCGACCGTGTCGTATGTCTTCCTG
GCCTCCTTTGCCAAGCTCCCATTGTTGACCATTCTCCCTGCCCACTTGCC
ATGCTTCCTTGCCGACGCAACAATCTTTTCAACCGCAGCAACAAACTCCG
GCTCATCTCCCCGTGCAGGGACGTATCCGAGGAGAGACTGCGCCAAGTCA
TTGGGCCCGATGAAGACAAGATCCACCCCTGGTACTGCACAGATTGCGTC
GACATTCTCCACACCAGCACGGGTCTCAATTTGTATCATAGTAATGATGG
TCTCGTTGGCCGACTTCATATACTCGGGGGTAGTCAGGCCGTGGCCAATG
GCAGGAAAAGCGGACCCTTGCCCTCGCAGTCCTTGTGGTGGGAATTTGGC
AGAAGCGACCACTTGGAATGCCTCTTCGGCAGTATTGATTTGAGGGACCA
TGATGCCATGCGCACCCGTATCAAGCGCACGTTTGACAATATCATGAGTG
GGACCGCGAATGCGGATGATTGGGGATACACCCAGGGAGGAGATGGCTGC
GACAGAGTTGTGCATGGCATCGTCGGAGATATGACCATGCTCGCAATCGA
TAATGATGCCGTCCACCCCAGTTAGGGCGACGATTTGGGCCATGCGCACG
GAAGGAAGGGCCATGAAAGTCATTAACGGATATTCTCCGGCTTTGATCTT
ATTGAGAAGCCGGAGCCGAGGGTTGGAGATCTCGGTTGTGAGAGGAGTGG
GGTAGGTCTTCGTGTAAGTCATCGTGTCGGTAGTGTCAGGAGGACGTTGA
GATAGGCAATGACGGCTCTTACTGGACTCGCCGACATTGTCAGTTAAGTA
GTTGACCTACTACAGGGATGTTGATGGTGTCCAAGATGATTCACCAATGC
GGGGCGCTGATCGGGAGGAGTGTTTAGCGTTCCGGGAGGAGCTCCGCCGA
TCCATCTCAACTCCTCTTCCTCCTCCACTCCTCCTTGGAAGGTTTGACAC
GCGGGTTGAGCTGCGCTCCCACCGGGGATAAAAGATAAGGTTAGTGCGCT
CCTCCCCCCTTATCTACCCGGCGCTTGATTGCCAGCGAATCAGTGACTCA
CCATCGTTCGTAACAGACTCCACATCAATAGCCGGTCGGCATCACCCAGA
TGTCATGGGAAACGGCGGCCTGTCCAATCAAGATAACATGATATACACCT
TTGATGTTCCTTAATATCTTGGCCAATCTCCCCCTGGGGCAACAGCTTGT
AGGTGCCTTTCAAAGCCTCCATTCCTGCTATTATGGATCTCAAAAAACGC
CCCTCGTCCATTAAGTCGGAGGGTAATATCTCCTCTGCAGAAGGACAGGT
CAATGATGTCGTTGGTGATGTGTATGAGCGGATGCCAGAGTCGCTACGCA
GTCTCAGCGAAGATGAGCGCCAACGCCTCAATCGGAGAATCGTCCGCAAG
GTAGACCTCATGGTTCTGCCTACCATTGGCATCTTGTACATTCTGAACTA
CATCGATCGTCAAAACCTTGCTTCGGCCAAGCTGCAGGGCATCATGGAAG
ATCTCCAAATGTCAACCGAGCAATTCGCCACAGCCGTCTCAATTCTCTTC
GTCGGCTATCTGCCCTTCCAGATCCCCAGCAACCTCCTCATTACCAAGAT
TTCCCGGCCAGGTATGTACATCTGTCTTGCTGTCTCCATCTGGGGCTGCA
TTTCAGCTGCAACCGCGGCTGTTCATAACTACGGCCAATTGCTCGCCGTG
CGTGCAGTTCTTGGTATCGCCGAAGCCGTCTTCTTCCCGGGTGCAATCTA
TTACCTCTCAGCCTGGTACACCAAAGCCGAGCTGGGCAAGCGGATAGCCG
GTCTCTACATTGCCCAACAAGTCGGCAACGCCTTTGGTGGACTCTTCGCC
GCTGCCATTCTTCAATTGGACGGTGTCCATAACATCGCTGGTTGGCAATG
GCTCTTCATCATCGAAGGAAGCGCCACAGTCGGCATCGGCATAATCTGCG
CTTTAATAATGCCCGAATTTCCCCACAATAGTCGCATCCTCTCCCCGATC
GAGCGGGACCTCGCTGTCTGGCGCATCGAATCCGAAGCCGGAGCCGCCGA
GGGCACAGAGAACGAACCTATCCTTCGCGGATTCATCAAAGCCCTCTCCG
ACCCTAAACTCCTTCTTTTGATCTTCTCGAACATGCTCTCTCAGACCCAA
GGTTCCATCGCCAATTACTTCCCCACCTTGATCGGCTCCCTCGGCTTCTC
TTCCAACACCATCAGCCTCCTCCTCACCGCACCGCCCTACATCCTCGCAG
GCATAATCTACTATTTCATCATGTTCTACTCGGATCGCTACAACACCATC
TATCCTCTCATTCTGGGCTGCATCTCCATCTCCATCGTGATGTACATCAT
TCTCATGTCGACTTTGAACATTGGCGCACGATACTTTGCCATGATGATCC
TCCCGTTCGCCTCGGTTGGTCCACAGCTTCTCCTCTACAAAACTATCAAC
TTGCATCTGGCCCGTCCAGTGTCTAAGCGCGCTGCTGCTTCGGCTCTGGT
GAATGCCATTGGCGGTACGTCGAACATCTGGGCGTCGTATTTATACTACG
ATGGTCCGCACTTCTATGCGGCTTTTGGAACACTCATGGGCGCAGCATTC
CTCTTGGCTGCTACGGTGACGGTGTATCGTTGGTGCGTACGCCGCGAGAA
TAAGTATCTCGACTCTGGTGATCCAGACTTGATCGGCAAGGTAGTCAAGA
GAGGTGTTACAGAAGAGATGGTGCAGCTCCGGTGGCGATACGAGATGTAC
TGATTCCTACACGTAATACTCTGCAAATAGCCTTGATATAATCAGAATAT
GTAGTAGCCACACACATTGATAAATAAAACAACTTTACAGTACAC
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Coding sequence (CDS) from alignment at ch3:2221627..2224771+

>KJC3_003545-T2 ID=KJC3_003545-T2|Name=KJC3_003545-T2|organism=Aspergillus niger KJC3|type=CDS|length=1521bp|location=Sequence derived from alignment at ch3:2221627..2224771+ (Aspergillus niger KJC3)
ATGGATCTCAAAAAACGCCCCTCGTCCATTAAGTCGGAGGGTAATATCTC
CTCTGCAGAAGGACAGGTCAATGATGTCGTTGGTGATGTGTATGAGCGGA
TGCCAGAGTCGCTACGCAGTCTCAGCGAAGATGAGCGCCAACGCCTCAAT
CGGAGAATCGTCCGCAAGGTAGACCTCATGGTTCTGCCTACCATTGGCAT
CTTGTACATTCTGAACTACATCGATCGTCAAAACCTTGCTTCGGCCAAGC
TGCAGGGCATCATGGAAGATCTCCAAATGTCAACCGAGCAATTCGCCACA
GCCGTCTCAATTCTCTTCGTCGGCTATCTGCCCTTCCAGATCCCCAGCAA
CCTCCTCATTACCAAGATTTCCCGGCCAGGTATGTACATCTGTCTTGCTG
TCTCCATCTGGGGCTGCATTTCAGCTGCAACCGCGGCTGTTCATAACTAC
GGCCAATTGCTCGCCGTGCGTGCAGTTCTTGGTATCGCCGAAGCCGTCTT
CTTCCCGGGTGCAATCTATTACCTCTCAGCCTGGTACACCAAAGCCGAGC
TGGGCAAGCGGATAGCCGGTCTCTACATTGCCCAACAAGTCGGCAACGCC
TTTGGTGGACTCTTCGCCGCTGCCATTCTTCAATTGGACGGTGTCCATAA
CATCGCTGGTTGGCAATGGCTCTTCATCATCGAAGGAAGCGCCACAGTCG
GCATCGGCATAATCTGCGCTTTAATAATGCCCGAATTTCCCCACAATAGT
CGCATCCTCTCCCCGATCGAGCGGGACCTCGCTGTCTGGCGCATCGAATC
CGAAGCCGGAGCCGCCGAGGGCACAGAGAACGAACCTATCCTTCGCGGAT
TCATCAAAGCCCTCTCCGACCCTAAACTCCTTCTTTTGATCTTCTCGAAC
ATGCTCTCTCAGACCCAAGGTTCCATCGCCAATTACTTCCCCACCTTGAT
CGGCTCCCTCGGCTTCTCTTCCAACACCATCAGCCTCCTCCTCACCGCAC
CGCCCTACATCCTCGCAGGCATAATCTACTATTTCATCATGTTCTACTCG
GATCGCTACAACACCATCTATCCTCTCATTCTGGGCTGCATCTCCATCTC
CATCGTGATGTACATCATTCTCATGTCGACTTTGAACATTGGCGCACGAT
ACTTTGCCATGATGATCCTCCCGTTCGCCTCGGTTGGTCCACAGCTTCTC
CTCTACAAAACTATCAACTTGCATCTGGCCCGTCCAGTGTCTAAGCGCGC
TGCTGCTTCGGCTCTGGTGAATGCCATTGGCGGTACGTCGAACATCTGGG
CGTCGTATTTATACTACGATGGTCCGCACTTCTATGCGGCTTTTGGAACA
CTCATGGGCGCAGCATTCCTCTTGGCTGCTACGGTGACGGTGTATCGTTG
GTGCGTACGCCGCGAGAATAAGTATCTCGACTCTGGTGATCCAGACTTGA
TCGGCAAGGTAGTCAAGAGAGGTGTTACAGAAGAGATGGTGCAGCTCCGG
TGGCGATACGAGATGTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003545KJC3_003545Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003545-T2KJC3_003545-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003545-T2.utr5p1KJC3_003545-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003545-T2.utr5p2KJC3_003545-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003545-T2.utr5p3KJC3_003545-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003545-T2.exon1KJC3_003545-T2.exon1Aspergillus niger KJC3exon
KJC3_003545-T2.exon2KJC3_003545-T2.exon2Aspergillus niger KJC3exon
KJC3_003545-T2.exon3KJC3_003545-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003545-T2.cdsKJC3_003545-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003545-T2.utr3p1KJC3_003545-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2221627..2224771 +
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