You are here

Home

KJC3_003549-T1, KJC3_003549-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003549-T1
Unique NameKJC3_003549-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2237241..2238559-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003549-T1 ID=KJC3_003549-T1|Name=KJC3_003549-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1319bp|location=Sequence derived from alignment at ch3:2237241..2238559- (Aspergillus niger KJC3)
CTCCCTGCAAAGCTATAAATCGTTGCCAGACCCCTCTGGCGCCTTTGCTA
CAAACCCAAGCCACATCTTCGCAACCTGACCTCACTGCCTAGCACGGCAG
AAGTAACTCACCATGCTATCAACCCACCTCCTCTTCCTCGCCACCACCCT
CCTCACATCCCTCTTCCATCCCATTGCCGCCCATGTCGCCAAGCGCAGTG
GTAGCCTCCAACAAATCACCGATTTCGGTGATAACCCCACAGGTGTAGGC
ATGTACATCTACGTGCCTAATAACCTGGCCTCGAATCCTGGTATCGTGGT
TGCAATCCACTACTGTACGTCCCCTTACTTCTCTACATTATCTACCACAC
GTCGTGCAGACAACAATACTAAGTAAAGAATATAGGCACCGGCACTGGCC
CCGGCTACTACAGCAACTCCCCCTACGCCACCCTCTCCGAGCAATACGGC
TTCATCGTGATCTACCCGTCTAGCCCGTACTCCGGAGGCTGCTGGGACGT
GAGTTCGCAGGCAACGCTGACACATAATGGAGGTGGAAACAGTAACTCGA
TTGCCAACATGGTCACCTGGACGATTAGCGAGTACGGGGCGGATAGCAAG
AAGGTGTTTGTGACGGGTTCGAGTTCGGGGGCTATGATGACGGTATTTCC
CCATTCCTTCTTCCAACCTGTCCCCTCTATACGCATCAACATAGTAGCGC
AGTGCATACTGACTGGGAAAAGAACGTAATAGCAGCAACCTACCCCGAAC
TCTTCGCCGCTGGCACCGTCTACTCCGGCGTCTCAGCCGGCTGCTTCTAC
TCGGACACTAACCAAGTGGACGGATGGAATTCCACCTGCGCACAAGGAGA
CGTCATCACCACCCCGGAACACTGGGCTAGTATTGCCGAGGCAATGTATC
CAGGGTACTCGGGAAGCCGGCCAAAGATGCAGATCTACCACGGCAGTGTG
GATACGACGCTGTATCCGCAGAATTATTATGAGACGTGCAAGCAATGGGC
TGGAGTGTTTGGGTACGATTACAGTGCACCGGAATCGACGGAGGCGAATA
CTCCGCAGACGAATTATGAGACGACGATTTGGGGAGATAATCTGCAGGGG
ATCTTTGCGACGGGCGTGGGTCATACGGTGCCAATTCATGGGGATAAGGA
TATGGAGTGGTTTGGGTTTGCTTGATTTGGGGATGAATCGGAAGAGTGGA
GGTCTCTCGAGATGAGGAATGATGAAGCATCTGAAGTATGATAAGTCAGT
GGTTTTCGCCTCAACAAGCGATACCTTGAATCTCTAGTGTTACAATTTAC
ACCATGAAGCAAATGCGCG
back to top

Coding sequence (CDS) from alignment at ch3:2237241..2238559-

>KJC3_003549-T1 ID=KJC3_003549-T1|Name=KJC3_003549-T1|organism=Aspergillus niger KJC3|type=CDS|length=2736bp|location=Sequence derived from alignment at ch3:2237241..2238559- (Aspergillus niger KJC3)
AACGTAATAGCAGCAACCTACCCCGAACTCTTCGCCGCTGGCACCGTCTA
CTCCGGCGTCTCAGCCGGCTGCTTCTACTCGGACACTAACCAAGTGGACG
GATGGAATTCCACCTGCGCACAAGGAGACGTCATCACCACCCCGGAACAC
TGGGCTAGTATTGCCGAGGCAATGTATCCAGGGTACTCGGGAAGCCGGCC
AAAGATGCAGATCTACCACGGCAGTGTGGATACGACGCTGTATCCGCAGA
ATTATTATGAGACGTGCAAGCAATGGGCTGGAGTGTTTGGGTACGATTAC
AGTGCACCGGAATCGACGGAGGCGAATACTCCGCAGACGAATTATGAGAC
GACGATTTGGGGAGATAATCTGCAGGGGATCTTTGCGACGGGCGTGGGTC
ATACGGTGCCAATTCATGGGGATAAGGATATGGAGTGGTTTGGGTTTGCT
TGAGCACCGGCACTGGCCCCGGCTACTACAGCAACTCCCCCTACGCCACC
CTCTCCGAGCAATACGGCTTCATCGTGATCTACCCGTCTAGCCCGTACTC
CGGAGGCTGCTGGGACGTGAGTTCGCAGGCAACGCTGACACATAATGGAG
GTGGAAACAGTAACTCGATTGCCAACATGGTCACCTGGACGATTAGCGAG
TACGGGGCGGATAGCAAGAAGGTGTTTGTGACGGGTTCGAGTTCGGGGGC
TATGATGACGATGCTATCAACCCACCTCCTCTTCCTCGCCACCACCCTCC
TCACATCCCTCTTCCATCCCATTGCCGCCCATGTCGCCAAGCGCAGTGGT
AGCCTCCAACAAATCACCGATTTCGGTGATAACCCCACAGGTGTAGGCAT
GTACATCTACGTGCCTAATAACCTGGCCTCGAATCCTGGTATCGTGGTTG
CAATCCACTACTAACGTAATAGCAGCAACCTACCCCGAACTCTTCGCCGC
TGGCACCGTCTACTCCGGCGTCTCAGCCGGCTGCTTCTACTCGGACACTA
ACCAAGTGGACGGATGGAATTCCACCTGCGCACAAGGAGACGTCATCACC
ACCCCGGAACACTGGGCTAGTATTGCCGAGGCAATGTATCCAGGGTACTC
GGGAAGCCGGCCAAAGATGCAGATCTACCACGGCAGTGTGGATACGACGC
TGTATCCGCAGAATTATTATGAGACGTGCAAGCAATGGGCTGGAGTGTTT
GGGTACGATTACAGTGCACCGGAATCGACGGAGGCGAATACTCCGCAGAC
GAATTATGAGACGACGATTTGGGGAGATAATCTGCAGGGGATCTTTGCGA
CGGGCGTGGGTCATACGGTGCCAATTCATGGGGATAAGGATATGGAGTGG
TTTGGGTTTGCTTGAGCACCGGCACTGGCCCCGGCTACTACAGCAACTCC
CCCTACGCCACCCTCTCCGAGCAATACGGCTTCATCGTGATCTACCCGTC
TAGCCCGTACTCCGGAGGCTGCTGGGACGTGAGTTCGCAGGCAACGCTGA
CACATAATGGAGGTGGAAACAGTAACTCGATTGCCAACATGGTCACCTGG
ACGATTAGCGAGTACGGGGCGGATAGCAAGAAGGTGTTTGTGACGGGTTC
GAGTTCGGGGGCTATGATGACGATGCTATCAACCCACCTCCTCTTCCTCG
CCACCACCCTCCTCACATCCCTCTTCCATCCCATTGCCGCCCATGTCGCC
AAGCGCAGTGGTAGCCTCCAACAAATCACCGATTTCGGTGATAACCCCAC
AGGTGTAGGCATGTACATCTACGTGCCTAATAACCTGGCCTCGAATCCTG
GTATCGTGGTTGCAATCCACTACTAACGTAATAGCAGCAACCTACCCCGA
ACTCTTCGCCGCTGGCACCGTCTACTCCGGCGTCTCAGCCGGCTGCTTCT
ACTCGGACACTAACCAAGTGGACGGATGGAATTCCACCTGCGCACAAGGA
GACGTCATCACCACCCCGGAACACTGGGCTAGTATTGCCGAGGCAATGTA
TCCAGGGTACTCGGGAAGCCGGCCAAAGATGCAGATCTACCACGGCAGTG
TGGATACGACGCTGTATCCGCAGAATTATTATGAGACGTGCAAGCAATGG
GCTGGAGTGTTTGGGTACGATTACAGTGCACCGGAATCGACGGAGGCGAA
TACTCCGCAGACGAATTATGAGACGACGATTTGGGGAGATAATCTGCAGG
GGATCTTTGCGACGGGCGTGGGTCATACGGTGCCAATTCATGGGGATAAG
GATATGGAGTGGTTTGGGTTTGCTTGAGCACCGGCACTGGCCCCGGCTAC
TACAGCAACTCCCCCTACGCCACCCTCTCCGAGCAATACGGCTTCATCGT
GATCTACCCGTCTAGCCCGTACTCCGGAGGCTGCTGGGACGTGAGTTCGC
AGGCAACGCTGACACATAATGGAGGTGGAAACAGTAACTCGATTGCCAAC
ATGGTCACCTGGACGATTAGCGAGTACGGGGCGGATAGCAAGAAGGTGTT
TGTGACGGGTTCGAGTTCGGGGGCTATGATGACGATGCTATCAACCCACC
TCCTCTTCCTCGCCACCACCCTCCTCACATCCCTCTTCCATCCCATTGCC
GCCCATGTCGCCAAGCGCAGTGGTAGCCTCCAACAAATCACCGATTTCGG
TGATAACCCCACAGGTGTAGGCATGTACATCTACGTGCCTAATAACCTGG
CCTCGAATCCTGGTATCGTGGTTGCAATCCACTACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003549KJC3_003549Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003549-T1KJC3_003549-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003549-T1.cdsKJC3_003549-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003549-T1.utr3p1KJC3_003549-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003549-T1.exon3KJC3_003549-T1.exon3Aspergillus niger KJC3exon
KJC3_003549-T1.exon2KJC3_003549-T1.exon2Aspergillus niger KJC3exon
KJC3_003549-T1.exon1KJC3_003549-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003549-T1.utr5p1KJC3_003549-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
NoteCAZy:CE1
DBxrefInterPro:IPR010126
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00326
DBxrefPFAM:PF10503
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2237241..2238559 -
Powered by Drupal