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KJC3_003572-T1, KJC3_003572-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003572-T1
Unique NameKJC3_003572-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2312012..2314178+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003572-T1 ID=KJC3_003572-T1|Name=KJC3_003572-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2167bp|location=Sequence derived from alignment at ch3:2312012..2314178+ (Aspergillus niger KJC3)
GTGACGCCGCTTACACCAATCCTCTTCCCCGTCTCTCTCTCACCTTCATC
TTCCCCCCATCATCATGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTC
CAGATGGCCCTCCAAAACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGG
TGGTAATCCTCGCGCCGGCATGGGTCTCGCTACTTTGCTCCTCACTGGAC
TTGGAGTATATGCTGTTTCCAACTCGCTGTTCAACGGTGAGCTCATTATC
GTGCATAATGGGTGGAAGTATTGTTTTTACTGACGGCTACTGCAGTTGAT
GGTGGTCACCGTGCGATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGA
AATCTACAGTGAAGGTAAGCATACTCAATACTCTGCAGTCGGCTCATCTA
ACAGGCTGTCCTTCTAGGAACTCACCTTCGGATTCCCTGGATCGAAACTC
CTATTATCTATGATGTCCGCGCAAAGCCGCGCAATATTGCTTCCCTTACC
GGTACCAAGGACTTGCAGATGGTGAACATCACCTGCCGTGTCCTGTCCAG
ACCCCGTGTGGACGCCCTCCCCCAAATATACCGTACCCTGGGACAGGACT
TTGATGAGCGTGTGCTCCCTTCGATTGTGAACGAGGTCTTGAAGAGTGTG
GTGGCACAATTCAACGCCAGTCAGTTGATCACTCAGCGTGAGAACGTTGC
CCGCCTGGTCCGGGAGAACCTTGCTCGTCGGGCTGCTCGCTTCAACATTG
CCTTGGACGATGTGTCGCTTACGGTATGCTATTCCTATTATCACTTCTTT
TATCCGTCTCGCTAATACCTGCCATAGCACTTGACCTTCTCCCCCGAATT
CACCGCCGCCGTCGAAGCCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGG
CCGCTTTCCTGGTCGACAAGGCCCGCCAGGAGAAGCAGGCATTCATTGTG
CGCGCTCAGGGTGAGGCTCGTTCAGCCGAGCTGATCGGTGATGCCATCAA
GAAGAGCAAGAGTTACATCGAGCTGCGGAAGATCGAGAACGCCCGCCAAA
TCGCCCAGATCCTGCAGGAGAACGGTGGCCGGAACAAGCTGTACCTGGAC
AGCCAGGGATTGGGCCTGAACGTCAACGCGGGCTCCGACGACACGAAATA
AGCGGACGGATGGACCGATGGAGAGGAATGGGGACTTTGTTAATGGTGTA
GCAAGACATGGCGCTATGAAGATCGTCCGACAGGACGACAGGTGAATGGA
ATCGGGTACTTGTACAAATAGTTATTCTCAGGTTCGAGCAACGGCGATCA
GTTTCTCTTCTCTTACTACATGAAGACCGGTGGTACACACTCAGTCACTG
TACGAGCTATAAAATGGATATGCAGTTATAGCGGAGCTGCGGCGGGGACG
AATGCGGCGGCGGAAATCTCTACCAGCGGAATCAACCACCACCATTTCAA
ACCCAGTAGAACAGATCCTCTACGTGGGAGTTCAAACCCATTCCAACCCC
CAAACACCTCCCTGATAAATCGATCAATTGTAAGTCCATCCCAATCACCT
ACGCTATACCGCACCGTACCACCACAACCCAACCCAACCCAAGTTTTCCC
CGCTCGAAAATAAATTCCTCTCCCCACCCCGCCGCCGCGCATATCCAAAT
CCTCCACCCCACCATCCTCACAACAACTAACCCCTCCTCTCTCGCAGCCA
AACGAGAAAATACACACAAATAAACACCAAGATGGCCGACGCAGACCCAA
TGATAACCTTCACCCAAGACCCTAACATGGCCCTAAACCTCGACCTCAAC
ATCCAAGAAATCCTCCTCGCCGCATCCACCCACAACATCCCCCTCCTGCG
GCGCCTCATCCGCGAAAACCAAACGCCCGGGAACCCCGCAAACGTCAAGG
ACCCCGAGACAGGGTTCTCGCCGCTCCACGCGGCCATCGCTGCATGCGAA
GAGAGCAACGAGGAGGGCGAGAAGCAGACGAATGGCGTCGACACAACCAA
CGCTGGTGAGGAGGGTGGAGCGTCGGCCGGCGTCGTCGAAACAGTCAAGT
TCCTGCTCGGGGAGGGCGCGATCTGGAATGATCTGGACTTGAATGATGAG
ACGCCCGGGTGTATTGCGAGACGGTTGGGGTTGATGGAGGTTTATGATAT
GATTGTGGATGCGGGGG
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Coding sequence (CDS) from alignment at ch3:2312012..2314178+

>KJC3_003572-T1 ID=KJC3_003572-T1|Name=KJC3_003572-T1|organism=Aspergillus niger KJC3|type=CDS|length=3684bp|location=Sequence derived from alignment at ch3:2312012..2314178+ (Aspergillus niger KJC3)
ATGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTCCAGATGGCCCTCCA
AAACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGGTGGTAATCCTCGCG
CCGGCATGGGTCTCGCTACTTTGCTCCTCACTGGACTTGGAGTATATGCT
GTTTCCAACTCGCTGTTCAACGTTGATGGTGGTCACCGTGCGATCAAGTA
CTCCAGAGTAGGTGGTGTCAAGAAGGAAATCTACAGTGAAGGAACTCACC
TTCGGATTCCCTGGATCGAAACTCCTATTATCTATGATGTCCGCGCAAAG
CCGCGCAATATTGCTTCCCTTACCGGTACCAAGGACTTGCAGATGGTGAA
CATCACCTGCCGTGTCCTGTCCAGACCCCGTGTGGACGCCCTCCCCCAAA
TATACCGTACCCTGGGACAGGACTTTGATGAGCGTGTGCTCCCTTCGATT
GTGAACGAGGTCTTGAAGAGTGTGGTGGCACAATTCAACGCCAGTCAGTT
GATCACTCAGCGTGAGAACGTTGCCCGCCTGGTCCGGGAGAACCTTGCTC
GTCGGGCTGCTCGCTTCAACATTGCCTTGGACGATGTGTCGCTTACGCAC
TTGACCTTCTCCCCCGAATTCACCGCCGCCGTCGAAGCCAAGCAGGTTGC
TCAGCAGGAAGCCCAGCGGGCCGCTTTCCTGGTCGACAAGGCCCGCCAGG
AGAAGCAGGCATTCATTGTGCGCGCTCAGGGTGAGGCTCGTTCAGCCGAG
CTGATCGGTGATGCCATCAAGAAGAGCAAGAGTTACATCGAGCTGCGGAA
GATCGAGAACGCCCGCCAAATCGCCCAGATCCTGCAGGAGAACGGTGGCC
GGAACAAGCTGTACCTGGACAGCCAGGGATTGGGCCTGAACGTCAACGCG
GGCTCCGACGACACGAAATAAATGTCCGGGAACCCCAGGGATCAGTTGTA
CAAGCTCCAGATGGCCCTCCAAAACCGCCGCGGCGGTTTTGGTGGCGGCT
TCGGTGGTGGTAATCCTCGCGCCGGCATGGGTCTCGCTACTTTGCTCCTC
ACTGGACTTGGAGTATATGCTGTTTCCAACTCGCTGTTCAACGTTGATGG
TGGTCACCGTGCGATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGAAA
TCTACAGTGAAGGAACTCACCTTCGGATTCCCTGGATCGAAACTCCTATT
ATCTATGATGTCCGCGCAAAGCCGCGCAATATTGCTTCCCTTACCGGTAC
CAAGGACTTGCAGATGGTGAACATCACCTGCCGTGTCCTGTCCAGACCCC
GTGTGGACGCCCTCCCCCAAATATACCGTACCCTGGGACAGGACTTTGAT
GAGCGTGTGCTCCCTTCGATTGTGAACGAGGTCTTGAAGAGTGTGGTGGC
ACAATTCAACGCCAGTCAGTTGATCACTCAGCGTGAGAACGTTGCCCGCC
TGGTCCGGGAGAACCTTGCTCGTCGGGCTGCTCGCTTCAACATTGCCTTG
GACGATGTGTCGCTTACGCACTTGACCTTCTCCCCCGAATTCACCGCCGC
CGTCGAAGCCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGGCCGCTTTCC
TGGTCGACAAGGCCCGCCAGGAGAAGCAGGCATTCATTGTGCGCGCTCAG
GGTGAGGCTCGTTCAGCCGAGCTGATCGGTGATGCCATCAAGAAGAGCAA
GAGTTACATCGAGCTGCGGAAGATCGAGAACGCCCGCCAAATCGCCCAGA
TCCTGCAGGAGAACGGTGGCCGGAACAAGCTGTACCTGGACAGCCAGGGA
TTGGGCCTGAACGTCAACGCGGGCTCCGACGACACGAAATAAATGTCCGG
GAACCCCAGGGATCAGTTGTACAAGCTCCAGATGGCCCTCCAAAACCGCC
GCGGCGGTTTTGGTGGCGGCTTCGGTGGTGGTAATCCTCGCGCCGGCATG
GGTCTCGCTACTTTGCTCCTCACTGGACTTGGAGTATATGCTGTTTCCAA
CTCGCTGTTCAACGTTGATGGTGGTCACCGTGCGATCAAGTACTCCAGAG
TAGGTGGTGTCAAGAAGGAAATCTACAGTGAAGGAACTCACCTTCGGATT
CCCTGGATCGAAACTCCTATTATCTATGATGTCCGCGCAAAGCCGCGCAA
TATTGCTTCCCTTACCGGTACCAAGGACTTGCAGATGGTGAACATCACCT
GCCGTGTCCTGTCCAGACCCCGTGTGGACGCCCTCCCCCAAATATACCGT
ACCCTGGGACAGGACTTTGATGAGCGTGTGCTCCCTTCGATTGTGAACGA
GGTCTTGAAGAGTGTGGTGGCACAATTCAACGCCAGTCAGTTGATCACTC
AGCGTGAGAACGTTGCCCGCCTGGTCCGGGAGAACCTTGCTCGTCGGGCT
GCTCGCTTCAACATTGCCTTGGACGATGTGTCGCTTACGCACTTGACCTT
CTCCCCCGAATTCACCGCCGCCGTCGAAGCCAAGCAGGTTGCTCAGCAGG
AAGCCCAGCGGGCCGCTTTCCTGGTCGACAAGGCCCGCCAGGAGAAGCAG
GCATTCATTGTGCGCGCTCAGGGTGAGGCTCGTTCAGCCGAGCTGATCGG
TGATGCCATCAAGAAGAGCAAGAGTTACATCGAGCTGCGGAAGATCGAGA
ACGCCCGCCAAATCGCCCAGATCCTGCAGGAGAACGGTGGCCGGAACAAG
CTGTACCTGGACAGCCAGGGATTGGGCCTGAACGTCAACGCGGGCTCCGA
CGACACGAAATAAATGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTCC
AGATGGCCCTCCAAAACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGGT
GGTAATCCTCGCGCCGGCATGGGTCTCGCTACTTTGCTCCTCACTGGACT
TGGAGTATATGCTGTTTCCAACTCGCTGTTCAACGTTGATGGTGGTCACC
GTGCGATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGAAATCTACAGT
GAAGGAACTCACCTTCGGATTCCCTGGATCGAAACTCCTATTATCTATGA
TGTCCGCGCAAAGCCGCGCAATATTGCTTCCCTTACCGGTACCAAGGACT
TGCAGATGGTGAACATCACCTGCCGTGTCCTGTCCAGACCCCGTGTGGAC
GCCCTCCCCCAAATATACCGTACCCTGGGACAGGACTTTGATGAGCGTGT
GCTCCCTTCGATTGTGAACGAGGTCTTGAAGAGTGTGGTGGCACAATTCA
ACGCCAGTCAGTTGATCACTCAGCGTGAGAACGTTGCCCGCCTGGTCCGG
GAGAACCTTGCTCGTCGGGCTGCTCGCTTCAACATTGCCTTGGACGATGT
GTCGCTTACGCACTTGACCTTCTCCCCCGAATTCACCGCCGCCGTCGAAG
CCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGGCCGCTTTCCTGGTCGAC
AAGGCCCGCCAGGAGAAGCAGGCATTCATTGTGCGCGCTCAGGGTGAGGC
TCGTTCAGCCGAGCTGATCGGTGATGCCATCAAGAAGAGCAAGAGTTACA
TCGAGCTGCGGAAGATCGAGAACGCCCGCCAAATCGCCCAGATCCTGCAG
GAGAACGGTGGCCGGAACAAGCTGTACCTGGACAGCCAGGGATTGGGCCT
GAACGTCAACGCGGGCTCCGACGACACGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PHB2KJC3_003572Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003572-T1KJC3_003572-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003572-T1.utr5p1KJC3_003572-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003572-T1.exon1KJC3_003572-T1.exon1Aspergillus niger KJC3exon
KJC3_003572-T1.exon2KJC3_003572-T1.exon2Aspergillus niger KJC3exon
KJC3_003572-T1.exon3KJC3_003572-T1.exon3Aspergillus niger KJC3exon
KJC3_003572-T1.exon4KJC3_003572-T1.exon4Aspergillus niger KJC3exon
KJC3_003572-T1.exon5KJC3_003572-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003572-T1.cdsKJC3_003572-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003572-T1.utr3p1KJC3_003572-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_003572-T1.utr3p2KJC3_003572-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036013
DBxrefInterPro:IPR001107
DBxrefInterPro:IPR000163
DBxrefPFAM:PF01145
Product subunit of the prohibitin complex (Phb1p-Phb2p)
ProductProhibitin-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2312012..2314178 +
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