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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2382424..2384551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003598-T1 ID=KJC3_003598-T1|Name=KJC3_003598-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2128bp|location=Sequence derived from alignment at ch3:2382424..2384551+ (Aspergillus niger KJC3)
CCACCTCTCACGTTACTACTCCGCATCTGACCGAAACACACTTGACCTAG
CAGGTCAAAGTCCCAAGGTACCCCTTTCTTTACCTTCCAACCAGCAACTA
AACGTAGCAGAAGGTCATTATTTCTGAACATTGAATTCTTGTTACTCTGG
CAGCTATACTGCTGGGTCTGTAGCGACGTGTTTGCAATGCAGGATATTTA
CATTCGACGCTATGGCTACTCTCGGTTGACGGAAGAAGGCGAGATTAGAC
TCTTGAAAATCTACCCCGAGATGGACGGAGATGGTGAAATTTGCTGTGAT
ATCTTCAACATCCGTCTCAAAGACCGACCCAGCTATATAGCCCTCTCATA
CACATGGGGTGCCCCGACACCCGAAGCATCCGTCAAAGGTGTTACCAGCA
TCCCCAATCACCATGTCAAGTGCAACGGGGACGTTATCCACATCACTAAA
AATCTTCACGATTTCCTAAATAGGGTACGCAGCGACCGCAAACTATGTCC
AAGGAGTTTCTGGATTGATTCAGTGTGTATCAATCAGGAAGACGAACTCG
AGAGGGCCAGTCAAGTCGCTTTTATGGCATCTATCTACCGCTCTGCGGAC
ATGGTTATTTCCTGGCTTGGCGAGCAAGACGCACATACTGAGGATGCCTT
TTCGCTTATCAGGTTCTTAGGAAAAACAACAGTCTTGGAAAATGCGACCA
TAAACGATACAGCTTCTGGGGACTCTGTTGATCTTTGCGGCCAACTTCTC
GAAGCTCCCGAATGGATTTCATTGGGGAAGTTCTGGGAACGGACCTACTT
CACGCGAGCGTGGGTTATACAAGAAATTGCCCTAGCAAGGGGTATTATGG
TTATGTGTGGTGGATACACAGTAGATTGGGATCATATTGTTCAGGTGTCA
CGGTATTTGACACTCATGCCGTGGAAATGGGCGTCACATATGAAGTCGAG
CATCCGAAAAGACGGAATAGAAGCAAGCCATTCTATGCCACTATACCTTA
ATTCGAATCGCAAAATGGTATTTTCGAAGAAACAAAATTCCCTACTGCAC
ATCCTTATCAAGTCGCGGCGCTTTCGTTGCCTTGATCCCAGGGACAAGGT
ATATGCCTTACTCGGGCTTCTAGGAGATCGAGCGCGAGGAGAAAGACACC
TATACCCTATTTATAAAGATCGCTCTGTCAGTAAGGTCTATATATCCACA
GCGATATATATACTAGAGGAAACGGACGATCTGCTGCTTCTCGCTCACGC
AGAGGGAAAAGACTTCCGAAATATCAGGGACCTCCCATCCTGGGTACCAG
ACTGGTCATGCCAGAGAGGTCTGGGTCTTGGGATCACTGGTTATTCGAGA
TTTACCGCTGCAGGGACTCTGAAGCGGTTTCTTCAAATCAATGAGGCTAA
GAGCCACCTAACTGTGCGCGGTTTATGGCTCGACCGGGTCGCGCAAGTTG
GAGAATCCAAGGATGAGGCGATAAAGTTCAAAGACCTTGCATATTTTCCT
GGTTGGCTTTCTATCCTGTTAGCTCTCCCTCTGAAATACCATACGGGACA
ACCAAGAGCCGAAGTCTTCTGGAGAACGCTGATTACCGATACGGCTGCAC
GTGTTCCTCAGCCAGCACACCACCCAGCGCCAGATGAGTTCGGTTGTGCA
TTTCGCAAATGGATTATTCGGATCGTTTCGGAATGGTCTAACAAGCCATT
GTCTACGGAGAAGACAGATTTCTTGGACCAATTATATCAACTATTTAACT
CTGATGAGACAAGCCATTTTCAATATGCTGTTGGAAAACAAGGTAATGGA
CCGGAAAACAACGGTGACATCTCTCCCGTACATACTGGAAACAGCTATGC
GCCGTACGGTGATGCTTACGAAGTCCATGTAAACTATTCTTCTCAGACAA
GACTCATACGAACAGATTCTAACTACCTGGGCCTCGCTACAACATCCATA
AAAGAAGGGGACTCTATATGGATTGTGGCTGGGTCCAGGGTCCCACTTGT
TCTGCGAGAAGCGGATGAACGAGGTGTGTACCGGGTTGTTGGGGGTGCTT
ATGTTCACGGATTTATGCAGGGAGAGGCATTGAATCTTGGCGGCGAATTT
ACGTTTATTAAGATAGTGTAAAAGAGGG back to topCoding sequence (CDS) from alignment at ch3:2382424..2384551+ >KJC3_003598-T1 ID=KJC3_003598-T1|Name=KJC3_003598-T1|organism=Aspergillus niger KJC3|type=CDS|length=1935bp|location=Sequence derived from alignment at ch3:2382424..2384551+ (Aspergillus niger KJC3)
ATGCAGGATATTTACATTCGACGCTATGGCTACTCTCGGTTGACGGAAGA
AGGCGAGATTAGACTCTTGAAAATCTACCCCGAGATGGACGGAGATGGTG
AAATTTGCTGTGATATCTTCAACATCCGTCTCAAAGACCGACCCAGCTAT
ATAGCCCTCTCATACACATGGGGTGCCCCGACACCCGAAGCATCCGTCAA
AGGTGTTACCAGCATCCCCAATCACCATGTCAAGTGCAACGGGGACGTTA
TCCACATCACTAAAAATCTTCACGATTTCCTAAATAGGGTACGCAGCGAC
CGCAAACTATGTCCAAGGAGTTTCTGGATTGATTCAGTGTGTATCAATCA
GGAAGACGAACTCGAGAGGGCCAGTCAAGTCGCTTTTATGGCATCTATCT
ACCGCTCTGCGGACATGGTTATTTCCTGGCTTGGCGAGCAAGACGCACAT
ACTGAGGATGCCTTTTCGCTTATCAGGTTCTTAGGAAAAACAACAGTCTT
GGAAAATGCGACCATAAACGATACAGCTTCTGGGGACTCTGTTGATCTTT
GCGGCCAACTTCTCGAAGCTCCCGAATGGATTTCATTGGGGAAGTTCTGG
GAACGGACCTACTTCACGCGAGCGTGGGTTATACAAGAAATTGCCCTAGC
AAGGGGTATTATGGTTATGTGTGGTGGATACACAGTAGATTGGGATCATA
TTGTTCAGGTGTCACGGTATTTGACACTCATGCCGTGGAAATGGGCGTCA
CATATGAAGTCGAGCATCCGAAAAGACGGAATAGAAGCAAGCCATTCTAT
GCCACTATACCTTAATTCGAATCGCAAAATGGTATTTTCGAAGAAACAAA
ATTCCCTACTGCACATCCTTATCAAGTCGCGGCGCTTTCGTTGCCTTGAT
CCCAGGGACAAGGTATATGCCTTACTCGGGCTTCTAGGAGATCGAGCGCG
AGGAGAAAGACACCTATACCCTATTTATAAAGATCGCTCTGTCAGTAAGG
TCTATATATCCACAGCGATATATATACTAGAGGAAACGGACGATCTGCTG
CTTCTCGCTCACGCAGAGGGAAAAGACTTCCGAAATATCAGGGACCTCCC
ATCCTGGGTACCAGACTGGTCATGCCAGAGAGGTCTGGGTCTTGGGATCA
CTGGTTATTCGAGATTTACCGCTGCAGGGACTCTGAAGCGGTTTCTTCAA
ATCAATGAGGCTAAGAGCCACCTAACTGTGCGCGGTTTATGGCTCGACCG
GGTCGCGCAAGTTGGAGAATCCAAGGATGAGGCGATAAAGTTCAAAGACC
TTGCATATTTTCCTGGTTGGCTTTCTATCCTGTTAGCTCTCCCTCTGAAA
TACCATACGGGACAACCAAGAGCCGAAGTCTTCTGGAGAACGCTGATTAC
CGATACGGCTGCACGTGTTCCTCAGCCAGCACACCACCCAGCGCCAGATG
AGTTCGGTTGTGCATTTCGCAAATGGATTATTCGGATCGTTTCGGAATGG
TCTAACAAGCCATTGTCTACGGAGAAGACAGATTTCTTGGACCAATTATA
TCAACTATTTAACTCTGATGAGACAAGCCATTTTCAATATGCTGTTGGAA
AACAAGGTAATGGACCGGAAAACAACGGTGACATCTCTCCCGTACATACT
GGAAACAGCTATGCGCCGTACGGTGATGCTTACGAAGTCCATGTAAACTA
TTCTTCTCAGACAAGACTCATACGAACAGATTCTAACTACCTGGGCCTCG
CTACAACATCCATAAAAGAAGGGGACTCTATATGGATTGTGGCTGGGTCC
AGGGTCCCACTTGTTCTGCGAGAAGCGGATGAACGAGGTGTGTACCGGGT
TGTTGGGGGTGCTTATGTTCACGGATTTATGCAGGGAGAGGCATTGAATC
TTGGCGGCGAATTTACGTTTATTAAGATAGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003598-T1.utr5p1 | KJC3_003598-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003598-T1.utr3p1 | KJC3_003598-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2382424..2384551 + |
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