You are here

Home

KJC3_003614-T1, KJC3_003614-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003614-T1
Unique NameKJC3_003614-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2421476..2422825+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003614-T1 ID=KJC3_003614-T1|Name=KJC3_003614-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1350bp|location=Sequence derived from alignment at ch3:2421476..2422825+ (Aspergillus niger KJC3)
GTTTGGACTCAAAGCAATTCGCTCTCATGCCACCAACCAAGATGCGTTCT
GTGTACATTACAGAACATACGGCGCCCGATCAATACCAGCTGGGCGATGT
GCCCTCGCTGGTCGTGGAGAAGCCCACCGACATCTTGATCAAGGTTCATG
CCGCCAGCATCAACCCGATAGATGTGAAGAAAGCCTCGGGGGCAACGAAA
ATGGTTCTGAAGGATAGGTACGAACTTAATCTCCATGACAATTTTTCTGG
TCTAACTTCTATGAGCAGCTTTCCGTATAAAATTGGCTACGACTGTGCCG
GCACGGTGGTCAACATTGGATCTCAGGTAACACGGTTTCAGGCCGGTGAC
GAGGTCTTCGTGCGATTACCAGAATGCCACCGCGGATCATGGAGCGAGCT
CGCCCGATCGACTGAAGACTTTGTCGCATTGAAGCCGAAGAATCTGTCTA
TGGAAGATGCCGCGTCAATTCCGTTAGCGGCCATGACATCCCTGCAGGCG
CTGCGTGGCTATGAAGGCGATCTCGCGGGTAAGACGGTTTTCATACCCGC
TGGTCGTAAGTTCCCTATTCGGTTATCACAGGCTAGACCATACTTAACTA
AACTTGACACAGTTGGCGGAACTGGCATTTTTGCATGCCAGCTCGCAAAA
AATATCTTCAAAGCCGGCAAGGTGATTACCACGGTTTCCACTCAGAAGGT
TCCCAAGGTGAAAGAGCTGTTGGGAGAGGGGATAGTAGACGAGAGTAAGT
AGACACTGACTCTGGTCTGATTGATATTACCAGAAGACTCACAAATGATT
TCAGTCATTGACTACAGAAAGTCCGATCCTAAGGAAGTCATCCCCAAGGG
ATCTGTCGATTTTATCGTCGACACGACGGGTAGTGCAATGGAATATCTGA
GTCTAGTCCGACCGAAAGGAGCCATCATTACAGTCTCTATATTGACCTCT
GGAGACGTTCTTCAAAACTCAAGCGTTATGCGCCGGTCGCCCGACAAGAA
CGATAAAGCAACAGTGCCCTTCCCTCTCCGGATTGCATTGAACGTGATGG
ATCGAATCCGAGTAGCTCGTGCATCTCGTTATGGGGTCAAATACGCATCC
ATCTTCTTGGAACCAAATGCGGCTGATTTGAATCCAATTCGGGGATGGGT
GGAGGCCGGGAAGTTGAAAACGGTTGTGGGAACGAAGGCAAGTTTTAATG
ATATTAAGGCAGTCCGGGATGCTTGTCAAGTAGTGTATGATGGGAAGGGA
GGCGTTGGCAAGTCTGTGATTGTGTTTGATTAATATAATTTCGCTGTATA
TTTAGGAAGTTCTTCTACCAGGCTAATTCTACTACAATTTTCTGAAAGTC
back to top

Coding sequence (CDS) from alignment at ch3:2421476..2422825+

>KJC3_003614-T1 ID=KJC3_003614-T1|Name=KJC3_003614-T1|organism=Aspergillus niger KJC3|type=CDS|length=4356bp|location=Sequence derived from alignment at ch3:2421476..2422825+ (Aspergillus niger KJC3)
ATGCCACCAACCAAGATGCGTTCTGTGTACATTACAGAACATACGGCGCC
CGATCAATACCAGCTGGGCGATGTGCCCTCGCTGGTCGTGGAGAAGCCCA
CCGACATCTTGATCAAGGTTCATGCCGCCAGCATCAACCCGATAGATGTG
AAGAAAGCCTCGGGGGCAACGAAAATGGTTCTGAAGGATAGCTTTCCGTA
TAAAATTGGCTACGACTGTGCCGGCACGGTGGTCAACATTGGATCTCAGG
TAACACGGTTTCAGGCCGGTGACGAGGTCTTCGTGCGATTACCAGAATGC
CACCGCGGATCATGGAGCGAGCTCGCCCGATCGACTGAAGACTTTGTCGC
ATTGAAGCCGAAGAATCTGTCTATGGAAGATGCCGCGTCAATTCCGTTAG
CGGCCATGACATCCCTGCAGGCGCTGCGTGGCTATGAAGGCGATCTCGCG
GGTAAGACGGTTTTCATACCCGCTGGTCTTGGCGGAACTGGCATTTTTGC
ATGCCAGCTCGCAAAAAATATCTTCAAAGCCGGCAAGGTGATTACCACGG
TTTCCACTCAGAAGGTTCCCAAGGTGAAAGAGCTGTTGGGAGAGGGGATA
GTAGACGAGATCATTGACTACAGAAAGTCCGATCCTAAGGAAGTCATCCC
CAAGGGATCTGTCGATTTTATCGTCGACACGACGGGTAGTGCAATGGAAT
ATCTGAGTCTAGTCCGACCGAAAGGAGCCATCATTACAGTCTCTATATTG
ACCTCTGGAGACGTTCTTCAAAACTCAAGCGTTATGCGCCGGTCGCCCGA
CAAGAACGATAAAGCAACAGTGCCCTTCCCTCTCCGGATTGCATTGAACG
TGATGGATCGAATCCGAGTAGCTCGTGCATCTCGTTATGGGGTCAAATAC
GCATCCATCTTCTTGGAACCAAATGCGGCTGATTTGAATCCAATTCGGGG
ATGGGTGGAGGCCGGGAAGTTGAAAACGGTTGTGGGAACGAAGGCAAGTT
TTAATGATATTAAGGCAGTCCGGGATGCTTGTCAAGTAGTGTATGATGGG
AAGGGAGGCGTTGGCAAGTCTGTGATTGTGTTTGATTAAATGCCACCAAC
CAAGATGCGTTCTGTGTACATTACAGAACATACGGCGCCCGATCAATACC
AGCTGGGCGATGTGCCCTCGCTGGTCGTGGAGAAGCCCACCGACATCTTG
ATCAAGGTTCATGCCGCCAGCATCAACCCGATAGATGTGAAGAAAGCCTC
GGGGGCAACGAAAATGGTTCTGAAGGATAGCTTTCCGTATAAAATTGGCT
ACGACTGTGCCGGCACGGTGGTCAACATTGGATCTCAGGTAACACGGTTT
CAGGCCGGTGACGAGGTCTTCGTGCGATTACCAGAATGCCACCGCGGATC
ATGGAGCGAGCTCGCCCGATCGACTGAAGACTTTGTCGCATTGAAGCCGA
AGAATCTGTCTATGGAAGATGCCGCGTCAATTCCGTTAGCGGCCATGACA
TCCCTGCAGGCGCTGCGTGGCTATGAAGGCGATCTCGCGGGTAAGACGGT
TTTCATACCCGCTGGTCTTGGCGGAACTGGCATTTTTGCATGCCAGCTCG
CAAAAAATATCTTCAAAGCCGGCAAGGTGATTACCACGGTTTCCACTCAG
AAGGTTCCCAAGGTGAAAGAGCTGTTGGGAGAGGGGATAGTAGACGAGAT
CATTGACTACAGAAAGTCCGATCCTAAGGAAGTCATCCCCAAGGGATCTG
TCGATTTTATCGTCGACACGACGGGTAGTGCAATGGAATATCTGAGTCTA
GTCCGACCGAAAGGAGCCATCATTACAGTCTCTATATTGACCTCTGGAGA
CGTTCTTCAAAACTCAAGCGTTATGCGCCGGTCGCCCGACAAGAACGATA
AAGCAACAGTGCCCTTCCCTCTCCGGATTGCATTGAACGTGATGGATCGA
ATCCGAGTAGCTCGTGCATCTCGTTATGGGGTCAAATACGCATCCATCTT
CTTGGAACCAAATGCGGCTGATTTGAATCCAATTCGGGGATGGGTGGAGG
CCGGGAAGTTGAAAACGGTTGTGGGAACGAAGGCAAGTTTTAATGATATT
AAGGCAGTCCGGGATGCTTGTCAAGTAGTGTATGATGGGAAGGGAGGCGT
TGGCAAGTCTGTGATTGTGTTTGATTAAATGCCACCAACCAAGATGCGTT
CTGTGTACATTACAGAACATACGGCGCCCGATCAATACCAGCTGGGCGAT
GTGCCCTCGCTGGTCGTGGAGAAGCCCACCGACATCTTGATCAAGGTTCA
TGCCGCCAGCATCAACCCGATAGATGTGAAGAAAGCCTCGGGGGCAACGA
AAATGGTTCTGAAGGATAGCTTTCCGTATAAAATTGGCTACGACTGTGCC
GGCACGGTGGTCAACATTGGATCTCAGGTAACACGGTTTCAGGCCGGTGA
CGAGGTCTTCGTGCGATTACCAGAATGCCACCGCGGATCATGGAGCGAGC
TCGCCCGATCGACTGAAGACTTTGTCGCATTGAAGCCGAAGAATCTGTCT
ATGGAAGATGCCGCGTCAATTCCGTTAGCGGCCATGACATCCCTGCAGGC
GCTGCGTGGCTATGAAGGCGATCTCGCGGGTAAGACGGTTTTCATACCCG
CTGGTCTTGGCGGAACTGGCATTTTTGCATGCCAGCTCGCAAAAAATATC
TTCAAAGCCGGCAAGGTGATTACCACGGTTTCCACTCAGAAGGTTCCCAA
GGTGAAAGAGCTGTTGGGAGAGGGGATAGTAGACGAGATCATTGACTACA
GAAAGTCCGATCCTAAGGAAGTCATCCCCAAGGGATCTGTCGATTTTATC
GTCGACACGACGGGTAGTGCAATGGAATATCTGAGTCTAGTCCGACCGAA
AGGAGCCATCATTACAGTCTCTATATTGACCTCTGGAGACGTTCTTCAAA
ACTCAAGCGTTATGCGCCGGTCGCCCGACAAGAACGATAAAGCAACAGTG
CCCTTCCCTCTCCGGATTGCATTGAACGTGATGGATCGAATCCGAGTAGC
TCGTGCATCTCGTTATGGGGTCAAATACGCATCCATCTTCTTGGAACCAA
ATGCGGCTGATTTGAATCCAATTCGGGGATGGGTGGAGGCCGGGAAGTTG
AAAACGGTTGTGGGAACGAAGGCAAGTTTTAATGATATTAAGGCAGTCCG
GGATGCTTGTCAAGTAGTGTATGATGGGAAGGGAGGCGTTGGCAAGTCTG
TGATTGTGTTTGATTAAATGCCACCAACCAAGATGCGTTCTGTGTACATT
ACAGAACATACGGCGCCCGATCAATACCAGCTGGGCGATGTGCCCTCGCT
GGTCGTGGAGAAGCCCACCGACATCTTGATCAAGGTTCATGCCGCCAGCA
TCAACCCGATAGATGTGAAGAAAGCCTCGGGGGCAACGAAAATGGTTCTG
AAGGATAGCTTTCCGTATAAAATTGGCTACGACTGTGCCGGCACGGTGGT
CAACATTGGATCTCAGGTAACACGGTTTCAGGCCGGTGACGAGGTCTTCG
TGCGATTACCAGAATGCCACCGCGGATCATGGAGCGAGCTCGCCCGATCG
ACTGAAGACTTTGTCGCATTGAAGCCGAAGAATCTGTCTATGGAAGATGC
CGCGTCAATTCCGTTAGCGGCCATGACATCCCTGCAGGCGCTGCGTGGCT
ATGAAGGCGATCTCGCGGGTAAGACGGTTTTCATACCCGCTGGTCTTGGC
GGAACTGGCATTTTTGCATGCCAGCTCGCAAAAAATATCTTCAAAGCCGG
CAAGGTGATTACCACGGTTTCCACTCAGAAGGTTCCCAAGGTGAAAGAGC
TGTTGGGAGAGGGGATAGTAGACGAGATCATTGACTACAGAAAGTCCGAT
CCTAAGGAAGTCATCCCCAAGGGATCTGTCGATTTTATCGTCGACACGAC
GGGTAGTGCAATGGAATATCTGAGTCTAGTCCGACCGAAAGGAGCCATCA
TTACAGTCTCTATATTGACCTCTGGAGACGTTCTTCAAAACTCAAGCGTT
ATGCGCCGGTCGCCCGACAAGAACGATAAAGCAACAGTGCCCTTCCCTCT
CCGGATTGCATTGAACGTGATGGATCGAATCCGAGTAGCTCGTGCATCTC
GTTATGGGGTCAAATACGCATCCATCTTCTTGGAACCAAATGCGGCTGAT
TTGAATCCAATTCGGGGATGGGTGGAGGCCGGGAAGTTGAAAACGGTTGT
GGGAACGAAGGCAAGTTTTAATGATATTAAGGCAGTCCGGGATGCTTGTC
AAGTAGTGTATGATGGGAAGGGAGGCGTTGGCAAGTCTGTGATTGTGTTT
GATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003614KJC3_003614Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003614-T1KJC3_003614-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003614-T1.utr5p1KJC3_003614-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003614-T1.exon1KJC3_003614-T1.exon1Aspergillus niger KJC3exon
KJC3_003614-T1.exon2KJC3_003614-T1.exon2Aspergillus niger KJC3exon
KJC3_003614-T1.exon3KJC3_003614-T1.exon3Aspergillus niger KJC3exon
KJC3_003614-T1.exon4KJC3_003614-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003614-T1.cdsKJC3_003614-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003614-T1.utr3p1KJC3_003614-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2421476..2422825 +
Powered by Drupal