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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2465644..2468597+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003632-T1 ID=KJC3_003632-T1|Name=KJC3_003632-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2954bp|location=Sequence derived from alignment at ch3:2465644..2468597+ (Aspergillus niger KJC3)
GAACCATCTTGTTTTACTTTATTCTAGCCATTGGCTTGACCTGTCACATA
TCTAACTTGCTGAATATCTGAATTGGTGTTACCGGAAGCTTCATCCCCTC
ATCTACCCACATAACTTACTCCGCACCGACCCTCCGACCTCCGATCCCCA
CTCCGCAATATCTTCTTCCTCGCCGATGCTCCATCCATAACCTCACACCA
ACCAATCCACCTCCCCCGCAGAGAACCACCGCCATGGCGCACTCTAAACG
CAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGT
CAAGCTGGGGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCA
TTCGGCTCGTGTCGACTTTGCCTACACCCGGCGCGGGAACCCGTCGTCGC
CTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACC
TTCTCGCCCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAA
GCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGATGAAGCGCG
AACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAG
CAGCGAAGAAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCA
AAGAAACGCAAAGCAGATACCACAGAGGCATTGGCTGCTTTCAAGGCGCG
AGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATA
AAGAGATGGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAG
CTGAAGAAGGAAAAGGTCTAAGACCATTGTCAATCCCCTTGGTAAGCAGC
TCGCTGACAATCTCCAGGAATCAAACAAATCAGCCCTCCCATCCTTCTGG
GTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAACAA
AGCCATTAAACTAACCCCCATTTGTCCCGCTTCCACCGACTCCAACCGCC
ACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCATTTCACCGAAGAAAAG
GCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAACACT
GACAAATGGGCTCAAAGCAATGTGTATGTTTTACCTACTTACCCACCGCA
TATGTCCTCAACGCACCTACTAATACTGTGCTGCTACATCAAGTAACGAA
ACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTC
CGCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACC
GCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGGATGTCAC
GCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGA
AGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTCGGAGGGG
ACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAGTCGGGGGTTGC
GTTTCAGTGTTGATGTGGTTTGCTTACGAGTCTGGTTTGGCGTGGAGTTT
GTGGGTGGTAATATGTTCGGTGTGTGTGTATAAAACCCGCGTTGGGGCGC
GGAAGTTGGGTTATGAACTGGCTGCGGAGACAGCGCTATGGCTATATCTA
TATCTATACGACCTGGGGAAAACTATCATGTCTGATCAATATGAATACAT
ATATAGATGTGGTATCAATCTATACAGAACCAAAATCGACCTGATGATAT
CCCTGGCCATGCAAAGGGAATAATGATAAGTCTATAGTACAAATGAAGGA
ACTCTTCCCTTCCCACTATCCACAAACCATCCATCTCTCAATCTACACCT
CCATGCCAGATTTATTTCTTCTTGCTGGCATTGTTGAACTCCCTCACGAC
AACATCACACTTGACCTCCTGGCACAGCCTCTTCCTGCGCCCAGCATCCA
ACTTCGCCGCAAACTCAAGTCCACTAGCGCGCTCCACAGCTTCAAGAGGC
ACCTCAAACTCCGTCAAACGCTTATCATTCGAGATCCTCGTATTAGGCAG
CACAAACGCGCCCAGCGCAACCTTGCCCGCCGTAGCAGGGCCCTCCTCCG
CATACACGACCTTATAGAAGTGCGTGGGGACAGCAACATTCGGCGGGTTT
CCGATAACCTCGTACGAGACACGCCACTTTCCATCTTGATCGCGGTGAGG
CAAGTAAAGAGGGCCAGTAACCACCCGGACGGAGGGGTACTTTTTCGTCA
AGTCACGGCAGAACTCCTCAAAGTGGGCCCAGTAGTCGCGGTTGAATCCC
TCACCGACCTGCGGGCACATGTTCGACAGTGCGAAGGTCGCGTCCATGGC
GTCCTGCGACCATTTGGCGTCCGCGGCGGGCACCTGGTGGCCGCGGTCAT
AGCCGGAGCGGAAGTAGTCGGACAGCTTGGCACGGAAGAGCGGCGGGATC
GTGGTGTCTTCGAAGAATGTGCTGCCCTTGCGGTCGGCGTTCTTCTGTGC
GAGCGACTGCGGGGTGATGTGTTCGGCGACCCAGGACGGGTTGCGTGTGC
GACGGTCGTAGGCGCCTGCTAGGGGTGCGGAGAGGAGGGTGTCGGCCACG
GGACCGGGGAAGCCATACTGGTAGATGCCGGCTGGGTCGACGGGGAAGCC
GCTGGTTGGGGTAGGTTTGGGGGCGAGAGAGGGAGCGGCGGGTTGAGGAG
CGGGGAGTTTGGCGGAGGAAGTAGTCGGAGGGTGAGGAGGAAGTTGTTGT
TGGGGGAGTTGTTGCTGCTGTTGTGGTTGGGGTCGAGGGGAGTAGAAGAG
AGCCGTCAGACCGGCGCCCGTGGCGGCACTGGCGGCAGCGATGGCCGCGA
AGGTGGCCTTGGACATGGTTGGCGGTGATGAAGGGAGGGAGGATGTCCAA
GGAGAGGAGGAGAGGAGAGGAGAGAAAGGATAAGGATGGAAGAGATGGAT
GGAG back to topCoding sequence (CDS) from alignment at ch3:2465644..2468597+ >KJC3_003632-T1 ID=KJC3_003632-T1|Name=KJC3_003632-T1|organism=Aspergillus niger KJC3|type=CDS|length=3474bp|location=Sequence derived from alignment at ch3:2465644..2468597+ (Aspergillus niger KJC3)
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGA
GCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATCGGCC
GCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGA
ATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCG
AAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAG
CATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAATCAC
AGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGT
GTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAG
AACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGAATCAAACAAATCAGCC
CTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGA
AATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTCCA
CCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCAT
TTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAG
CTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTTAACGAAACCCT
GCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTCCGCAC
GATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACCGCTGC
CCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGGATGTCACGCCGT
CAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAAGGAC
AAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTCGGAGGGGACAGG
GTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAGTCGGGGGTTGCGTTTC
AGTGTTGAATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACC
TCCTACGAGCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGT
CATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTAC
ACCCGGCGCGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTC
TGTCGCGAATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAATCAA
GCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGG
AGGAGCGGGCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAA
CTCGTGAGCATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGTCAAG
CCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAG
AGGCATTGGCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGG
AAGAAGGTGTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGCGCGA
GGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGAATCAAACA
AATCAGCCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGAC
CCGAACGAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCC
CGCTTCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTG
AGGTGCATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTC
TGCCCAAGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTTAAC
GAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGA
CTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAG
ACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGGATGT
CACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAA
AGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTCGGAG
GGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAGTCGGGGGT
TGCGTTTCAGTGTTGAATGGCGCACTCTAAACGCAACACCTCCCTTCCTC
ATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAA
CGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACT
TTGCCTACACCCGGCGCGGGAACCCGTCGTCGCCTGCGCCACCAACGGTG
ATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGCCCAGCGACAG
GAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGC
AGAGGAGGAGGAGCGGGCATTAGATGAAGCGCGAACGCGGGAACTCCGTG
ATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAAGAAGAACAAC
GGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGA
TACCACAGAGGCATTGGCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACG
GGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGATGGCTAGGATC
GCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGA
ATCAAACAAATCAGCCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCA
CCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAACTAACCCCC
ATTTGTCCCGCTTCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATC
CTTAGTTGAGGTGCATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGG
CCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCA
ATGTTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAA
ATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGAGC
AGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAG
ACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAA
GAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGA
GCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAG
TCGGGGGTTGCGTTTCAGTGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003632-T1.utr5p1 | KJC3_003632-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003632-T1.utr3p1 | KJC3_003632-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR027370 |
| DBxref | PFAM:PF13445 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2465644..2468597 + |
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