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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2483960..2486843+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003641-T1 ID=KJC3_003641-T1|Name=KJC3_003641-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2884bp|location=Sequence derived from alignment at ch3:2483960..2486843+ (Aspergillus niger KJC3)
CATTCTCCCTTCCTCCCCCCTCCCCTCCCCTCCCTCCCCTCTCTCCCCTA
TCCCTTTCCCTCTGTGAGGGATTCATCTAAGGTAAGTCAATTTGCTGAGG
TCATTCTGGTCTTGGTATTCTTTCAGCGATCTGGTCCTTTTCACCTCCCG
CTTCGTCCTGTCTCCTTCCTGGCGTCCACGCCTTCTCACCGTCGCAAGCG
TTCCCGGCTGCCTGCGACACCGCCTCGGCCCCTCCGACATCACCACCAGT
TCACGCACGGTTGTTCTGACTACCCGCGTGTTCATGCTCTCGACCCTGGC
CTCCCCTTCTCCCATCCAAACCATTCTATAAATCTGCCCCCCTTCTCCCG
GGGTCTCTCTGACGTGGTCCCCTGGAGCGTGCGTTCCGATCGCCGGTTTC
GTCTGCTGGTGCCGCAATCATGCCATCGGCCGACGCTTCTTCGTCCGCCC
GCCCCAACGGGACCAGCTCGCGGTCTGATCAGCTCGCTTACTACAAGGCG
CAATATGAACAGCTAGAAGCCGAACTGGCGGAATTCCAGGCTTCCAGCCG
GGAACTGGAAGCGGAGCTGGAGAAGGATATCGAGGCGTCAGAGAAGCGGG
AGCGGGTGTTGAAGGAGAAGCTGGAAAACCTGAGATACGAGGTCGACGAA
TGGAAGGTGAGCCTGACGTGTTCCTGGTCCCTCAAACTTCCCTCGTGGGA
GGCTTGAAGATCTCCAAGGTTAACGGGAACCCCCTTGCAGTCCAAATTCA
AGCAGTCCAAATCCGAGGCCAACACGGCCCAGAATTCGCTGCAGAAGGAA
ATCACAACCTTGCGAGACGCCAACCGAACCCTGCAGTTGAGACTACGTGA
TACTGAAGTTGCGAACGATGATTATGAGCGTCAGGCCCGCCACACCACTT
CGTCCCTGGAGGATATGGAGCAGAAATATAACATGGCCATTGAGCGCAGC
GTCCTGTTGGAAGACGAGGTGAAGGCCGGAGAAAAAGAGCGCGAGGCTCT
CCGCATTCAGTGCCAGCGTCTTCGGGATGAACTATCGGAGCAGAAACTCG
ACAACGAAATTCTTCAGGAGAAGCTTCGTCATGAGCAGTACGGCGGTCGG
CGCAAGAAGCCGACGCCTTTGTCCCGCACGGCATCGTCAACACCGCAGGC
CCCCGAGATTTTCGATCGCTCCCCGGGCACGTCCGCTGTGTCATCTCCCC
TATTTGTTCGTACGCCGATGAAGTCCTCGTTGATGGGTGTTACTGCAGCT
CCTCCATCGCCACCAATGTCCGAGACGTCGGTCAGTGTGACCAACATGAT
GGCCAACATGCGCAAGACAGTTCATGCTACTGCTGGATTTCCGCTCCAGA
AAGCGTCAGGATCCGAGTCTCTCATGGGCTCCCGGTCGATGTATGACGCC
AGACCCAACAAGTCTTCCCGATCTCGCACCACTGGCAATGCAAGCAACAA
TACCCGTTCTTCCGCATCCACAGCCACGTCCCGCATTAGTTTGACGAAGC
CCGCCAATTTTGGCAATTCGATCAGCTCGATCAATTCTCCGCGAAGCGAG
AATGATAACCAACAGAGCAATCTGCCCAAATCGGGTTCCTTGTTCCAGAT
TCGGGGTCTCATTGGCAAGATGCAGCAGCTGGAAGAAAGAGTCCAGTCAG
CCAAATCCAAGCTGCCCCCCCCGTCCGACTCGCCGTCTCGCACCTCTTCG
CGTTCCGGATCGATCTCCGTGAATGGGGGAAGTCCCGTTGCTTCCACTAT
CACTATGCGCCGAAACTCGCGCAAGCGGTTGAGTGGTAGCAGTTTCAGTT
CGTCGATCCGGGATAATGATGGCACGGCATCATCTGTCTCCAACAACCGA
CCATCCTTTGGCACCCGCAATGGAGGTGACAGCCGACCTAGCAGCCGTAC
TAGCTACTCCAGCGCCTTCAGCCAAAGTACACACCCAAGCATCGCGCCGT
CGACACGCCCAGAGAGCCGCCAGAGCCGGACTAAGACTCCTTTGGGACAT
TATTCGACGAACCCTACCACGGAGAGCCGGCGGCCGCGGTCGTCGCTGAG
CAATCCGTCGGGGCAGAATGGCTCGGTGAACGGCATGTCCAACATCGATG
AAGATGAGGACCAAAGCCTAGCGTTCCGCTTGTCCGTTCAAGCCAAGATT
AGCGAAGCCCGCGAGACCCGCTTCCCGCCATACTCTACGGCGACTCTGCC
GAAAAGACGGACACCCAGCGGCATCCCGGCGCCACGCACCTTGCGAACCA
GCACTGGCGGAGGCATGGCATCCCCAGACCCGAAGGCCACCAAGATTGGC
GACCTCGGCGAGACATTCTAAGCTTCTTCTTGTTCCTTTTCCCTTGTTCT
TCTTTCAAATACCCCTCTTTTATCCCCGAACGGCAATTGATTTCAAGGGG
GTTTATGATGTTCACGGCCGGTACGCAGGTTATTTTGATTCGCTTCTTTA
TTCCCCTTTAACCCTTGTCATCCCTCTTTTGCATCATTCTCATTTTCTCC
TATTCATTGATTCCCTTCGACATTGTTCCATTTACATCGACTACCCCTGG
CACGTTATTTTTTGAAAGAATGCCCCACCTAGAGGGGGTCCAGATCATTT
GGCGGACTTGTTTAGACAGGTTCATAGACATCTGCTTTATCAAACTTATC
GGAAGGTGGCATCCCATTTGTGTTGGGATGGCCTTCGAGTCTGTACAGTC
AGTGGCGGCGGAGTTGGAATTGTGACCGGTTGACTGGCGCATGGAAGGTT
CTTCTAGCCGGGAGGCTTGTCCTCCAACGGCGTCCAAGCTGTGTCTCAGC
ACCTGATTTCTTTGATGTTATTCTGTTGCTGTGTATTGAGAGAGTTGCCT
AGGCGTTAGGTAAATACCCAGTGACTTGGATGAA back to topCoding sequence (CDS) from alignment at ch3:2483960..2486843+ >KJC3_003641-T1 ID=KJC3_003641-T1|Name=KJC3_003641-T1|organism=Aspergillus niger KJC3|type=CDS|length=3636bp|location=Sequence derived from alignment at ch3:2483960..2486843+ (Aspergillus niger KJC3)
ATGCCATCGGCCGACGCTTCTTCGTCCGCCCGCCCCAACGGGACCAGCTC
GCGGTCTGATCAGCTCGCTTACTACAAGGCGCAATATGAACAGCTAGAAG
CCGAACTGGCGGAATTCCAGGCTTCCAGCCGGGAACTGGAAGCGGAGCTG
GAGAAGGATATCGAGGCGTCAGAGAAGCGGGAGCGGGTGTTGAAGGAGAA
GCTGGAAAACCTGAGATACGAGGTCGACGAATGGAAGTCCAAATTCAAGC
AGTCCAAATCCGAGGCCAACACGGCCCAGAATTCGCTGCAGAAGGAAATC
ACAACCTTGCGAGACGCCAACCGAACCCTGCAGTTGAGACTACGTGATAC
TGAAGTTGCGAACGATGATTATGAGCGTCAGGCCCGCCACACCACTTCGT
CCCTGGAGGATATGGAGCAGAAATATAACATGGCCATTGAGCGCAGCGTC
CTGTTGGAAGACGAGGTGAAGGCCGGAGAAAAAGAGCGCGAGGCTCTCCG
CATTCAGTGCCAGCGTCTTCGGGATGAACTATCGGAGCAGAAACTCGACA
ACGAAATTCTTCAGGAGAAGCTTCGTCATGAGCAGTACGGCGGTCGGCGC
AAGAAGCCGACGCCTTTGTCCCGCACGGCATCGTCAACACCGCAGGCCCC
CGAGATTTTCGATCGCTCCCCGGGCACGTCCGCTGTGTCATCTCCCCTAT
TTGTTCGTACGCCGATGAAGTCCTCGTTGATGGGTGTTACTGCAGCTCCT
CCATCGCCACCAATGTCCGAGACGTCGGTCAGTGTGACCAACATGATGGC
CAACATGCGCAAGACAGTTCATGCTACTGCTGGATTTCCGCTCCAGAAAG
CGTCAGGATCCGAGTCTCTCATGGGCTCCCGGTCGATGTATGACGCCAGA
CCCAACAAGTCTTCCCGATCTCGCACCACTGGCAATGCAAGCAACAATAC
CCGTTCTTCCGCATCCACAGCCACGTCCCGCATTAGTTTGACGAAGCCCG
CCAATTTTGGCAATTCGATCAGCTCGATCAATTCTCCGCGAAGCGAGAAT
GATAACCAACAGAGCAATCTGCCCAAATCGGGTTCCTTGTTCCAGATTCG
GGGTCTCATTGGCAAGATGCAGCAGCTGGAAGAAAGAGTCCAGTCAGCCA
AATCCAAGCTGCCCCCCCCGTCCGACTCGCCGTCTCGCACCTCTTCGCGT
TCCGGATCGATCTCCGTGAATGGGGGAAGTCCCGTTGCTTCCACTATCAC
TATGCGCCGAAACTCGCGCAAGCGGTTGAGTGGTAGCAGTTTCAGTTCGT
CGATCCGGGATAATGATGGCACGGCATCATCTGTCTCCAACAACCGACCA
TCCTTTGGCACCCGCAATGGAGGTGACAGCCGACCTAGCAGCCGTACTAG
CTACTCCAGCGCCTTCAGCCAAAGTACACACCCAAGCATCGCGCCGTCGA
CACGCCCAGAGAGCCGCCAGAGCCGGACTAAGACTCCTTTGGGACATTAT
TCGACGAACCCTACCACGGAGAGCCGGCGGCCGCGGTCGTCGCTGAGCAA
TCCGTCGGGGCAGAATGGCTCGGTGAACGGCATGTCCAACATCGATGAAG
ATGAGGACCAAAGCCTAGCGTTCCGCTTGTCCGTTCAAGCCAAGATTAGC
GAAGCCCGCGAGACCCGCTTCCCGCCATACTCTACGGCGACTCTGCCGAA
AAGACGGACACCCAGCGGCATCCCGGCGCCACGCACCTTGCGAACCAGCA
CTGGCGGAGGCATGGCATCCCCAGACCCGAAGGCCACCAAGATTGGCGAC
CTCGGCGAGACATTCTAAATGCCATCGGCCGACGCTTCTTCGTCCGCCCG
CCCCAACGGGACCAGCTCGCGGTCTGATCAGCTCGCTTACTACAAGGCGC
AATATGAACAGCTAGAAGCCGAACTGGCGGAATTCCAGGCTTCCAGCCGG
GAACTGGAAGCGGAGCTGGAGAAGGATATCGAGGCGTCAGAGAAGCGGGA
GCGGGTGTTGAAGGAGAAGCTGGAAAACCTGAGATACGAGGTCGACGAAT
GGAAGTCCAAATTCAAGCAGTCCAAATCCGAGGCCAACACGGCCCAGAAT
TCGCTGCAGAAGGAAATCACAACCTTGCGAGACGCCAACCGAACCCTGCA
GTTGAGACTACGTGATACTGAAGTTGCGAACGATGATTATGAGCGTCAGG
CCCGCCACACCACTTCGTCCCTGGAGGATATGGAGCAGAAATATAACATG
GCCATTGAGCGCAGCGTCCTGTTGGAAGACGAGGTGAAGGCCGGAGAAAA
AGAGCGCGAGGCTCTCCGCATTCAGTGCCAGCGTCTTCGGGATGAACTAT
CGGAGCAGAAACTCGACAACGAAATTCTTCAGGAGAAGCTTCGTCATGAG
CAGTACGGCGGTCGGCGCAAGAAGCCGACGCCTTTGTCCCGCACGGCATC
GTCAACACCGCAGGCCCCCGAGATTTTCGATCGCTCCCCGGGCACGTCCG
CTGTGTCATCTCCCCTATTTGTTCGTACGCCGATGAAGTCCTCGTTGATG
GGTGTTACTGCAGCTCCTCCATCGCCACCAATGTCCGAGACGTCGGTCAG
TGTGACCAACATGATGGCCAACATGCGCAAGACAGTTCATGCTACTGCTG
GATTTCCGCTCCAGAAAGCGTCAGGATCCGAGTCTCTCATGGGCTCCCGG
TCGATGTATGACGCCAGACCCAACAAGTCTTCCCGATCTCGCACCACTGG
CAATGCAAGCAACAATACCCGTTCTTCCGCATCCACAGCCACGTCCCGCA
TTAGTTTGACGAAGCCCGCCAATTTTGGCAATTCGATCAGCTCGATCAAT
TCTCCGCGAAGCGAGAATGATAACCAACAGAGCAATCTGCCCAAATCGGG
TTCCTTGTTCCAGATTCGGGGTCTCATTGGCAAGATGCAGCAGCTGGAAG
AAAGAGTCCAGTCAGCCAAATCCAAGCTGCCCCCCCCGTCCGACTCGCCG
TCTCGCACCTCTTCGCGTTCCGGATCGATCTCCGTGAATGGGGGAAGTCC
CGTTGCTTCCACTATCACTATGCGCCGAAACTCGCGCAAGCGGTTGAGTG
GTAGCAGTTTCAGTTCGTCGATCCGGGATAATGATGGCACGGCATCATCT
GTCTCCAACAACCGACCATCCTTTGGCACCCGCAATGGAGGTGACAGCCG
ACCTAGCAGCCGTACTAGCTACTCCAGCGCCTTCAGCCAAAGTACACACC
CAAGCATCGCGCCGTCGACACGCCCAGAGAGCCGCCAGAGCCGGACTAAG
ACTCCTTTGGGACATTATTCGACGAACCCTACCACGGAGAGCCGGCGGCC
GCGGTCGTCGCTGAGCAATCCGTCGGGGCAGAATGGCTCGGTGAACGGCA
TGTCCAACATCGATGAAGATGAGGACCAAAGCCTAGCGTTCCGCTTGTCC
GTTCAAGCCAAGATTAGCGAAGCCCGCGAGACCCGCTTCCCGCCATACTC
TACGGCGACTCTGCCGAAAAGACGGACACCCAGCGGCATCCCGGCGCCAC
GCACCTTGCGAACCAGCACTGGCGGAGGCATGGCATCCCCAGACCCGAAG
GCCACCAAGATTGGCGACCTCGGCGAGACATTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003641-T1.utr5p1 | KJC3_003641-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003641-T1.utr3p1 | KJC3_003641-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006964 |
| DBxref | PFAM:PF04880 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2483960..2486843 + |
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