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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2513679..2514511- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003646-T1 ID=KJC3_003646-T1|Name=KJC3_003646-T1|organism=Aspergillus niger KJC3|type=mRNA|length=833bp|location=Sequence derived from alignment at ch3:2513679..2514511- (Aspergillus niger KJC3)
CTATCTAATATCTGGACTACTAGACTACATTATCCCTCCCCGATCATGCA
GCTTGCTTATCGCTAATCAATTCATTCACTGAGCGGAGTCATCGCTCCCT
GTCATTTCCACCATCCCCCCACTGCACCCTGACTTGCATCCGCACGCGAC
CTGCATCAATCATTATCATCATCGTCATCCGATCATACCGAATTAATCTC
AACTTCAAAAATCACCACCACCACTAAACAACATGGCTCAAGTTCGTCCA
CCCCACCCCCCTCCTTAAACTAAAACCCTCACATTCAACCAACTAATCTC
CACCCCCATAGAAAGCCGCCAAAACCCTCGCCGCGCGCAACGCGTCCCTC
CTCACCCGCACCCACCTCATCAGTTTCGCCCTACACTTCCTCTTCCTCGC
TCTCCACTGGCTCTTCAACCGTCCTCGCTCTCTAACCCCCTACTTCACAC
TCGCCTGCCCGACCCTCATCATCGAATTCTACCTCGAACGGCTCGGCCGC
CCGGTCTACAACCCCGCTGATGGATCCCTCCGCTCTCCCGGAGAGGATCT
CGGCGCCGCAGGACTGACGGAATACATGTGGGACGTGCTGTACTGGACGT
GGGGGTGCATTGGTGCTGCCTGCTTGTTTGGCGATCGTGCTTGGTGGTTG
TGGATCGTCGTGCCAGTGTATTCGGTGTGGTTGGCGTACAGTACCTTTAT
GGGCATGAAGAGTGGGTTGGCGGGGATGGGTGGTGCTGGTGCGGGTGCTG
GGCAGGAGCAAGGAGGTGCGGCGGAGAGTAAGAGGCAGAAGAAGATGGAG
AAGAGGGGTGCCAGGGGGGTGCAGTATCGCTGA back to topCoding sequence (CDS) from alignment at ch3:2513679..2514511- >KJC3_003646-T1 ID=KJC3_003646-T1|Name=KJC3_003646-T1|organism=Aspergillus niger KJC3|type=CDS|length=1062bp|location=Sequence derived from alignment at ch3:2513679..2514511- (Aspergillus niger KJC3)
AAAGCCGCCAAAACCCTCGCCGCGCGCAACGCGTCCCTCCTCACCCGCAC
CCACCTCATCAGTTTCGCCCTACACTTCCTCTTCCTCGCTCTCCACTGGC
TCTTCAACCGTCCTCGCTCTCTAACCCCCTACTTCACACTCGCCTGCCCG
ACCCTCATCATCGAATTCTACCTCGAACGGCTCGGCCGCCCGGTCTACAA
CCCCGCTGATGGATCCCTCCGCTCTCCCGGAGAGGATCTCGGCGCCGCAG
GACTGACGGAATACATGTGGGACGTGCTGTACTGGACGTGGGGGTGCATT
GGTGCTGCCTGCTTGTTTGGCGATCGTGCTTGGTGGTTGTGGATCGTCGT
GCCAGTGTATTCGGTGTGGTTGGCGTACAGTACCTTTATGGGCATGAAGA
GTGGGTTGGCGGGGATGGGTGGTGCTGGTGCGGGTGCTGGGCAGGAGCAA
GGAGGTGCGGCGGAGAGTAAGAGGCAGAAGAAGATGGAGAAGAGGGGTGC
CAGGGGGGTGCAGTATCGCTGAATGGCTCAAAAAGCCGCCAAAACCCTCG
CCGCGCGCAACGCGTCCCTCCTCACCCGCACCCACCTCATCAGTTTCGCC
CTACACTTCCTCTTCCTCGCTCTCCACTGGCTCTTCAACCGTCCTCGCTC
TCTAACCCCCTACTTCACACTCGCCTGCCCGACCCTCATCATCGAATTCT
ACCTCGAACGGCTCGGCCGCCCGGTCTACAACCCCGCTGATGGATCCCTC
CGCTCTCCCGGAGAGGATCTCGGCGCCGCAGGACTGACGGAATACATGTG
GGACGTGCTGTACTGGACGTGGGGGTGCATTGGTGCTGCCTGCTTGTTTG
GCGATCGTGCTTGGTGGTTGTGGATCGTCGTGCCAGTGTATTCGGTGTGG
TTGGCGTACAGTACCTTTATGGGCATGAAGAGTGGGTTGGCGGGGATGGG
TGGTGCTGGTGCGGGTGCTGGGCAGGAGCAAGGAGGTGCGGCGGAGAGTA
AGAGGCAGAAGAAGATGGAGAAGAGGGGTGCCAGGGGGGTGCAGTATCGC
TGAATGGCTCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003646-T1.utr5p1 | KJC3_003646-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092658ZO |
| DBxref | InterPro:IPR008506 |
| DBxref | PFAM:PF05620 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2513679..2514511 - |
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