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KJC3_003672-T1, KJC3_003672-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003672-T1
Unique NameKJC3_003672-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2579677..2580798+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003672-T1 ID=KJC3_003672-T1|Name=KJC3_003672-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1122bp|location=Sequence derived from alignment at ch3:2579677..2580798+ (Aspergillus niger KJC3)
CCAGATCCCTCTTCAGCATGACAATCCCTTGACAACACCAGCAGATCTTC
TCTCACCACCAACATCAACCTCCACTGCACCCAACAACAACAACCACCAC
CACCACCACCACAAGAAGAACAACAATGTCCCACTCCCCTCCCTCCCCCT
CTCCCTCCCCATCCCCATCACCACCATTTCGCCCATACCGACCACCACCA
CCCACCAACAACCACAACCACACCACCACCTTCGACACCTCCATCCTCCC
CAACGGCTCCAAATCCCTCTCCGCCATCTCCATCCGCGCCTACCTCCTCG
GCACCGTCCTCGGCGTCTCCACAACCCTAACCATCCTCTCCCTCCTCTAC
GACCCCCTATACACTCCCCTCTGGCGCATCCCCTTCTTCCTCTCTTCTCT
CTCCCTCTTCCACTTCCTCGAATACTACACCACCGCCGCATACAACACCC
ACTTCGCCACCGTCTCCGCCTACCTCCTCACCTCCAACGGCTGGGCCTAT
AACATCGCCCACGGCTCCGCGATCCTCGAATGTCTCCTCATGCATACATA
TTTCACCGCCCGCCCGGTGCCGTTATACCTCCCCTCCTCGCTTACGACCT
ACCAAGTAGCCGTTGGCTTACTGCTGATGGTCGTGGGCCAGACGATCCGC
AGCGTGGCCATGGCGCAGGCGGGCAGTAACTTTAATCATACGGTGCAGGT
TACCCGACGGGAAGGGCATGTGCTTGTCACCGGGGGTGTGTATAGTGTGT
TGAGACATCCGAGTTACTTTGGGTTCTTTTGGTGGGGGTTGGGGACCCAG
TTGGTTCTTGGGAATGGGGTGTGTTTTGTAGCGTATGCGGTTGTCTTGTG
GAGGTTTTTTAGTGGGAGGATTTGGAGTAAGTCCTACTTCTTTTTCTTGC
TTTTGGTTTTGGGGGTGTGTGCTAATCGATTTGTGATAGGGGAGGAGAAG
TTCCTGGTTGCCTTCTTTGGGGAGGAGTATGAGCGGTATAGGAAGAGGAG
TTGGGTGGGGATTCCGGGGATTCATTGATTGTTTGGATTGGGATCTTTGA
TATGATACATATATTGTTTGTTTCTCGTGGAGTACTGGACAGGGAGGTAT
GGAGGGATTGTATAATCAAGTG
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Coding sequence (CDS) from alignment at ch3:2579677..2580798+

>KJC3_003672-T1 ID=KJC3_003672-T1|Name=KJC3_003672-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch3:2579677..2580798+ (Aspergillus niger KJC3)
ATGTCCCACTCCCCTCCCTCCCCCTCTCCCTCCCCATCCCCATCACCACC
ATTTCGCCCATACCGACCACCACCACCCACCAACAACCACAACCACACCA
CCACCTTCGACACCTCCATCCTCCCCAACGGCTCCAAATCCCTCTCCGCC
ATCTCCATCCGCGCCTACCTCCTCGGCACCGTCCTCGGCGTCTCCACAAC
CCTAACCATCCTCTCCCTCCTCTACGACCCCCTATACACTCCCCTCTGGC
GCATCCCCTTCTTCCTCTCTTCTCTCTCCCTCTTCCACTTCCTCGAATAC
TACACCACCGCCGCATACAACACCCACTTCGCCACCGTCTCCGCCTACCT
CCTCACCTCCAACGGCTGGGCCTATAACATCGCCCACGGCTCCGCGATCC
TCGAATGTCTCCTCATGCATACATATTTCACCGCCCGCCCGGTGCCGTTA
TACCTCCCCTCCTCGCTTACGACCTACCAAGTAGCCGTTGGCTTACTGCT
GATGGTCGTGGGCCAGACGATCCGCAGCGTGGCCATGGCGCAGGCGGGCA
GTAACTTTAATCATACGGTGCAGGTTACCCGACGGGAAGGGCATGTGCTT
GTCACCGGGGGTGTGTATAGTGTGTTGAGACATCCGAGTTACTTTGGGTT
CTTTTGGTGGGGGTTGGGGACCCAGTTGGTTCTTGGGAATGGGGTGTGTT
TTGTAGCGTATGCGGTTGTCTTGTGGAGGTTTTTTAGTGGGAGGATTTGG
AGGGAGGAGAAGTTCCTGGTTGCCTTCTTTGGGGAGGAGTATGAGCGGTA
TAGGAAGAGGAGTTGGGTGGGGATTCCGGGGATTCATTGAATGTCCCACT
CCCCTCCCTCCCCCTCTCCCTCCCCATCCCCATCACCACCATTTCGCCCA
TACCGACCACCACCACCCACCAACAACCACAACCACACCACCACCTTCGA
CACCTCCATCCTCCCCAACGGCTCCAAATCCCTCTCCGCCATCTCCATCC
GCGCCTACCTCCTCGGCACCGTCCTCGGCGTCTCCACAACCCTAACCATC
CTCTCCCTCCTCTACGACCCCCTATACACTCCCCTCTGGCGCATCCCCTT
CTTCCTCTCTTCTCTCTCCCTCTTCCACTTCCTCGAATACTACACCACCG
CCGCATACAACACCCACTTCGCCACCGTCTCCGCCTACCTCCTCACCTCC
AACGGCTGGGCCTATAACATCGCCCACGGCTCCGCGATCCTCGAATGTCT
CCTCATGCATACATATTTCACCGCCCGCCCGGTGCCGTTATACCTCCCCT
CCTCGCTTACGACCTACCAAGTAGCCGTTGGCTTACTGCTGATGGTCGTG
GGCCAGACGATCCGCAGCGTGGCCATGGCGCAGGCGGGCAGTAACTTTAA
TCATACGGTGCAGGTTACCCGACGGGAAGGGCATGTGCTTGTCACCGGGG
GTGTGTATAGTGTGTTGAGACATCCGAGTTACTTTGGGTTCTTTTGGTGG
GGGTTGGGGACCCAGTTGGTTCTTGGGAATGGGGTGTGTTTTGTAGCGTA
TGCGGTTGTCTTGTGGAGGTTTTTTAGTGGGAGGATTTGGAGGGAGGAGA
AGTTCCTGGTTGCCTTCTTTGGGGAGGAGTATGAGCGGTATAGGAAGAGG
AGTTGGGTGGGGATTCCGGGGATTCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006481C-terminal protein methylation
Vocabulary: Molecular Function
TermDefinition
GO:0004671protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003672KJC3_003672Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003672-T1.utr5p1KJC3_003672-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003672-T1.exon1KJC3_003672-T1.exon1Aspergillus niger KJC3exon
KJC3_003672-T1.exon2KJC3_003672-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003672-T1.cdsKJC3_003672-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003672-T1.utr3p1KJC3_003672-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003672-T1KJC3_003672-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR025770
DBxrefInterPro:IPR007269
DBxrefPFAM:PF04191
DBxrefPFAM:PF04140
DBxrefPFAM:PF06966
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2579677..2580798 +
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