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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2612059..2612710- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003686-T1 ID=KJC3_003686-T1|Name=KJC3_003686-T1|organism=Aspergillus niger KJC3|type=mRNA|length=652bp|location=Sequence derived from alignment at ch3:2612059..2612710- (Aspergillus niger KJC3)
ATGCCCCGCGCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGA
CTTCCACGTCTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCA
CGCGCTATCACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTA
TGCGGATCCCTGCGTCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGA
GAGTGATCCCGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGT
TCCGCATGGGGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCG
AGAGTCGAGAGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGC
GGTTTGGATGACTAGGAGTGGGATGGTGGAGAATGTTAAGACTGTAAGTC
CTTCTCTTTTTTTTATCAACCTTCTTGGCGATGGGGTATTGGGTTGGGAT
TTATGCTAATGAGGCTGGGTGGTGTTAGGCTGTCACTTTCATCGAGCAGG
GCCATGTTCGCGTCGGGACAGAGGTCGTTACGGATCCGGCGTACTTGGTT
ACGAGAAATCTGGAGGATTTCGTGACGTGGGTGGATAGCTCCAAGATTAA
GAGGAGTATTATGCAGTATCGGGATAATTTGGATGATTTTGATATGTTGT
GA back to topCoding sequence (CDS) from alignment at ch3:2612059..2612710- >KJC3_003686-T1 ID=KJC3_003686-T1|Name=KJC3_003686-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch3:2612059..2612710- (Aspergillus niger KJC3)
GCTGTCACTTTCATCGAGCAGGGCCATGTTCGCGTCGGGACAGAGGTCGT
TACGGATCCGGCGTACTTGGTTACGAGAAATCTGGAGGATTTCGTGACGT
GGGTGGATAGCTCCAAGATTAAGAGGAGTATTATGCAGTATCGGGATAAT
TTGGATGATTTTGATATGTTGTGAATGCCCCGCGCCCTCAAGCATCACGA
AAAGAAACTCCTCCGCAAAGTCGACTTCCACGTCTACAAATCCGACAACA
ACCACCGGGAATCTCAAATCCGCACGCGCTATCACCTGCAAGACCCCCTC
GACTACCGCAAATACAACCAGCTATGCGGATCCCTGCGTCAACTCGCGCA
CAAGTTGTCTGAGCTCGACCCCGAGAGTGATCCCGTGCGCAAGAAGCTGG
AATCCGAGGTGCTGGATAAGTTGTTCCGCATGGGGATTCTGAAGCAGAGT
CGCGAACAGGGGGCGGGACTTTCGAGAGTCGAGAGGGAGGTTACGGTTAG
TGCGTTTTGTAGGAGGAGGTTGGCGGTTTGGATGACTAGGAGTGGGATGG
TGGAGAATGTTAAGACTGCTGTCACTTTCATCGAGCAGGGCCATGTTCGC
GTCGGGACAGAGGTCGTTACGGATCCGGCGTACTTGGTTACGAGAAATCT
GGAGGATTTCGTGACGTGGGTGGATAGCTCCAAGATTAAGAGGAGTATTA
TGCAGTATCGGGATAATTTGGATGATTTTGATATGTTGTGAATGCCCCGC
GCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGACTTCCACGT
CTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCACGCGCTATC
ACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTATGCGGATCC
CTGCGTCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGAGAGTGATCC
CGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGTTCCGCATGG
GGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCGAGAGTCGAG
AGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGCGGTTTGGAT
GACTAGGAGTGGGATGGTGGAGAATGTTAAGACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0019843 | rRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264Y0W |
| DBxref | InterPro:IPR036986 |
| DBxref | InterPro:IPR002942 |
| DBxref | InterPro:IPR001912 |
| DBxref | PFAM:PF01479 |
| DBxref | PFAM:PF00163 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2612059..2612710 - |
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