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KJC3_003694-T1, KJC3_003694-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003694-T1
Unique NameKJC3_003694-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2635511..2636685+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003694-T1 ID=KJC3_003694-T1|Name=KJC3_003694-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1175bp|location=Sequence derived from alignment at ch3:2635511..2636685+ (Aspergillus niger KJC3)
CCATCTTCACGCGGCCACCGAGAAGAGGAGGACGCGCGATCCAGTTCGAC
TCCTCCCCGACGCGGATTTGGATTTCCATTTGACAAATACTCTATTTTAT
TTTTACAACCATCATGACGTCTTACGGGTTACTGGATCAACCAGACGAAG
GTTGGTTCTAGAAACACGCCCCCGGTCCCTGTCACCATGCTAATGCCCTT
CCAGATGGTCTCCACAAGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTT
CAAGCGGATTTCAAAACGCCTCCTCAACAACGATTCAACCGTAGTGTCCA
ACGCGACGCTCCCTCCCACCCCTCCACCAGATGGTGCAGACGATGATGCA
ACAGCAGCTGCAGAGGCGGAGAAACAGAGACGGCTCGAGGAATGGCGCCA
TTTCCGTGAAGATGTTGCTTTGGATTTTTCCGCATTTGAAGGCAGTATCG
CGCGCATCCAGTTCCTCTTGACGAGTAACGAGAAGGAGCGCGAGCGCTAT
GCGACAGAGAAGCTTCGAATCCTTGATACAATGCAGTCGGTGCGTGACAA
TACCGCAGAGCTGCGGGTACAGCTCGAGGAGGCCCAGCGTCTACTAGCAC
TGCGCAAAAGCTACGATGAATTGGCAGAGAAGATTACCAGCAACCGACTC
TTGAAGCCGCGCGAAGATCAACAGGCCAATCTACAAAAGCTACAGGCGGA
AATAACGGAGCTGGAGAAAGAGAGTAAAGAATACGCACACACCTGGTCGG
AACGGCGAGAACAGTTCGGTCGCATTGTTGAAGAAGGAATGCAACTTCGT
CGGCTCATTCGTGACGAGAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCA
AGAGGAAGAAGATGGAGATGACGGGGATGTTCCCTCCAAGGGGAAATCCA
GTGGAGCTAATACCCCTCGTCACGAGTCAGACAGTCTGACTCCTTCTCAA
CATGGCCATGATGATCTTGGACGATCACCAGCGGGCTTGCAAGTGGAAAA
GACGGGTACTGCCGGTGCGGTGTCACCCTTGCGACAGATGACTGCGGTGG
ACGACGAAAATAAGACTACCCCCGATCAGGACACCTCAATGGAAGATGAA
GGCGAGGTCCCCGAAGAGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCG
TGCAGACAAAATGGACACTACTTGA
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Coding sequence (CDS) from alignment at ch3:2635511..2636685+

>KJC3_003694-T1 ID=KJC3_003694-T1|Name=KJC3_003694-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch3:2635511..2636685+ (Aspergillus niger KJC3)
ATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGTCTCCACAA
GTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGATTTCAAAAC
GCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGCTCCCTCCC
ACCCCTCCACCAGATGGTGCAGACGATGATGCAACAGCAGCTGCAGAGGC
GGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGAAGATGTTG
CTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCCAGTTCCTC
TTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAGAAGCTTCG
AATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGAGCTGCGGG
TACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAAGCTACGAT
GAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCGCGCGAAGA
TCAACAGGCCAATCTACAAAAGCTACAGGCGGAAATAACGGAGCTGGAGA
AAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAGAACAGTTC
GGTCGCATTGTTGAAGAAGGAATGCAACTTCGTCGGCTCATTCGTGACGA
GAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCAAGAGGAAGAAGATGGAG
ATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTAATACCCCT
CGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCATGATGATCT
TGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTACTGCCGGTG
CGGTGTCACCCTTGCGACAGATGACTGCGGTGGACGACGAAAATAAGACT
ACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTCCCCGAAGA
GCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAAAATGGACA
CTACTTGAATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGT
CTCCACAAGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGAT
TTCAAAACGCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGC
TCCCTCCCACCCCTCCACCAGATGGTGCAGACGATGATGCAACAGCAGCT
GCAGAGGCGGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGA
AGATGTTGCTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCC
AGTTCCTCTTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAG
AAGCTTCGAATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGA
GCTGCGGGTACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAA
GCTACGATGAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCG
CGCGAAGATCAACAGGCCAATCTACAAAAGCTACAGGCGGAAATAACGGA
GCTGGAGAAAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAG
AACAGTTCGGTCGCATTGTTGAAGAAGGAATGCAACTTCGTCGGCTCATT
CGTGACGAGAAGGAGGAGGTCGAGCGCAGAGAGGGCATGCAAGAGGAAGA
AGATGGAGATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTA
ATACCCCTCGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCAT
GATGATCTTGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTAC
TGCCGGTGCGGTGTCACCCTTGCGACAGATGACTGCGGTGGACGACGAAA
ATAAGACTACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTC
CCCGAAGAGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAA
AATGGACACTACTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000445THO complex part of transcription export complex
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003694KJC3_003694Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003694-T1.utr5p1KJC3_003694-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003694-T1.exon1KJC3_003694-T1.exon1Aspergillus niger KJC3exon
KJC3_003694-T1.exon2KJC3_003694-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003694-T1.cdsKJC3_003694-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003694-T1KJC3_003694-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008501
DBxrefPFAM:PF05615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2635511..2636685 +
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