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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2645424..2646364+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003699-T1 ID=KJC3_003699-T1|Name=KJC3_003699-T1|organism=Aspergillus niger KJC3|type=mRNA|length=941bp|location=Sequence derived from alignment at ch3:2645424..2646364+ (Aspergillus niger KJC3)
ATGGTAAGAATATTGTTCTGATCGTCTATCAGTCTCGTTTCCGTGTTCCT
GGGCGTCGGAGAAGTGTTTTCGGTCAATCGGCATATTGCGAGATGGGACG
ACATACGGCACTCTTTTCCTACGGCGAACCGAGTTGAAAGCCGCCACTAT
ACGAAGCGCAACGATCGAAGCTGCAAACGAAAATCCTGAACCGTCAATAT
CAATACAAAAATGGTCAAAGATGATGGAATTCTCGACCGGGGTTTGCCCC
GCGATCAATTGTGGGATTGAAGTGAAAGATGTTGAGTGCGACCGAAACCA
TCAAAATCGAATTGTTCTGAGCCACGACACCCTTGCTATACCATCATCTG
CTTTTCCTCACTTTCTCGGAACAATATCATTCCCACCGTGAACCACCATC
TCCGACGACGAGGAACTCAGGAACAGGCTGCGGACGTTGTGTGATAACCA
TCCTACCACAGCAGGCGCTGATCAAACTCTTCTCGCATTCAGGTCAACGT
TCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGCACA
CCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGTGAACACTGCCCAA
GCAACCGAGCCCACCGCGCGACCTATGCTGATGCAATCATGATCTCTACA
GGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCG
GTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACC
AAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCA
GCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGGTACGTTCATACGC
TCGGCATACGATCTATGGGTGATGCTAACCATCTCTCTTCTTTTTCAACA
GTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAA back to topCoding sequence (CDS) from alignment at ch3:2645424..2646364+ >KJC3_003699-T1 ID=KJC3_003699-T1|Name=KJC3_003699-T1|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at ch3:2645424..2646364+ (Aspergillus niger KJC3)
ATGGTCAACGTTCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTG
CCACAAGCACACCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGCCT
CCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTAT
GGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAA
GATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTT
CTCTGAAGCGCTGCAAGCACTTCGAGCTTGGTGGTGACAAGAAGACCAAG
GGTGCTGCTCTTGTCTTCTAAATGGTCAACGTTCCGAAAACCCGCCGGAC
GTACTGCAAGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACCC
AGTACAAGGCTGGAAAGGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTAC
GACCGGAAGCAGAGCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAA
GAAGGCCAAGACCACCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTT
GCAAGACCAAGAAGCAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTT
GGTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAAATGGTCAA
CGTTCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGC
ACACCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGCCTCCCTGTTC
GCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTATGGTGGTCA
GACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAAGATCGTCC
TTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTTCTCTGAAG
CGCTGCAAGCACTTCGAGCTTGGTGGTGACAAGAAGACCAAGGGTGCTGC
TCTTGTCTTCTAAATGGTCAACGTTCCGAAAACCCGCCGGACGTACTGCA
AGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACCCAGTACAAG
GCTGGAAAGGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAA
GCAGAGCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCA
AGACCACCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACC
AAGAAGCAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGTGGTGA
CAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265JX6 |
| DBxref | InterPro:IPR011332 |
| DBxref | InterPro:IPR000552 |
| DBxref | PFAM:PF00935 |
| Product | 40s ribosomal protein L44e |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2645424..2646364 + |
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