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KJC3_003702-T1, KJC3_003702-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003702-T1
Unique NameKJC3_003702-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2653030..2654320-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003702-T1 ID=KJC3_003702-T1|Name=KJC3_003702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1291bp|location=Sequence derived from alignment at ch3:2653030..2654320- (Aspergillus niger KJC3)
ATGGCCACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCA
AGCATGTCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCC
AGACCTGTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGT
CAGCCCAGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCA
AACACATCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGAC
AGGCACAGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGT
GCTACAGGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAG
CAGTTTGAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTG
CATCTGGATACGTTCGTTATCTACCATTCGCAACTCACGCCAGCCAACTT
CAACTGAGTCCTACAGGTACAGGCTCTTCACTTCCCAGTGTAGACACTGA
AATACCAGATGAGAGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTG
TTTCCAGAGATGAGCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGAT
GCGTTGAAGAATGTCTACTTTCAAGTATTCTCGCCTGTATGTTTTGAACT
CCAATGATTTTCTTGAGCTATTCCTTCGCCAAGTGTCTTTTCATAAGTAC
CTGTGCTAACTCGGGACCTAGATGTTTCATATCCTGCATGACCTGACATT
TGAGGCCGAATACCAACAATTTTGTCACGATTCCAGCAGCGTCACAACAG
CGTGGATTGCGCTACTTTTTGCCATTCTGGGAATTGCCGTCACAGCGCTC
GAGGATGATGAGCCGTTGCTTTCCGATTTAGGTCGTGAGAAGACTGTCAC
CCGTAATATCAAAGTCCTATCATCGCGGTATCGATCCGCCTCGCTGCGCT
GTTTGGCCGCAGATGATGTCCTGTCTCGTCACTCCATCAATTCTCTCCAA
TCCCTTATTCTGATAAATTACGCGCGTATTCACCGGGGGCTTCCTACCTG
GACTCTTTTAGGCTTCACACATCATGTCGCCATATCCATGGGCTGTCATG
TTGACCCAGATCGATTCCCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGA
CGAGCTTGGGCCGGAGTAACTATGCTTTATACTATTCAAAATACAGTTTT
TTGGCCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTG
GAGATCAACGACGTGGACCTACTCACGGGGTCTTTATCTGA
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Coding sequence (CDS) from alignment at ch3:2653030..2654320-

>KJC3_003702-T1 ID=KJC3_003702-T1|Name=KJC3_003702-T1|organism=Aspergillus niger KJC3|type=CDS|length=2412bp|location=Sequence derived from alignment at ch3:2653030..2654320- (Aspergillus niger KJC3)
ATGTTTCATATCCTGCATGACCTGACATTTGAGGCCGAATACCAACAATT
TTGTCACGATTCCAGCAGCGTCACAACAGCGTGGATTGCGCTACTTTTTG
CCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTTGCTT
TCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCCTATC
ATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGATGTCC
TGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAATTAC
GCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCACACA
TCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTCCCGC
TCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGAGTAACT
ATGCTTTATACTATTCAAAATACAGTTTTTTGGCCATCTTGGTCATCATA
TACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGATCAACGACGTGGACCTA
CTCACGGGGTCTTTATCTGAATGGCCACCTCGAATCGCTCAAGCAGCAAG
AGGTTGCCCATAAGTTGCCAAGCATGTCGCTCGAGAAAGATACGCTGCTC
CCGTGACGGACGTCCGTGCCAGACCTGTGTTCGTCGAGGATTGGGCGCTG
AGGACTGCATATACCTGGGTCAGCCCAGGCTGTCCTCTGAGCATGCCTTG
ACGGCAGAGTCTGCGGGGCAAACACATCTGCTCGCACGGATCCGCGACTT
GGAGGAGCTACTTCATAGACAGGCACAGTCTCAGTCAAGTGGCTCCGTGT
CCCCGCAAAACTCTCCTAGTGCTACAGGCAGCTTCCTTGAGTCCGATAGA
GGTGTCGAGCTGAAGCCCAGCAGTTTGAGAAGCCCCTTGTTAAATAATGT
GGGCACTCTTCAGACCTTTGCATCTGGATACGTTCGTTATCTACCATTCG
CAACTCACGCCAGCCAACTTCAACTGAGTCCTACAGGTACAGGCTCTTCA
CTTCCCAGTGTAGACACTGAAATACCAGATGAGAGCGACGACCTTCAAAT
TCCGTTGACGAAATGCTCTGTTTCCAGAGATGAGCTGGTAGCTATTCTTC
CGCCACGTCGGTATTGCGATGCGTTGAAGAATGTCTACTTTCAAGTATTC
TCGCCTATGTTTCATATCCTGCATGACCTGACATTTGAGGCCGAATACCA
ACAATTTTGTCACGATTCCAGCAGCGTCACAACAGCGTGGATTGCGCTAC
TTTTTGCCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCG
TTGCTTTCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGT
CCTATCATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATG
ATGTCCTGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATA
AATTACGCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTT
CACACATCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGAT
TCCCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGA
GTAACTATGCTTTATACTATTCAAAATACAGTTTTTTGGCCATCTTGGTC
ATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGATCAACGACGTG
GACCTACTCACGGGGTCTTTATCTGAATGGCCACCTCGAATCGCTCAAGC
AGCAAGAGGTTGCCCATAAGTTGCCAAGCATGTCGCTCGAGAAAGATACG
CTGCTCCCGTGACGGACGTCCGTGCCAGACCTGTGTTCGTCGAGGATTGG
GCGCTGAGGACTGCATATACCTGGGTCAGCCCAGGCTGTCCTCTGAGCAT
GCCTTGACGGCAGAGTCTGCGGGGCAAACACATCTGCTCGCACGGATCCG
CGACTTGGAGGAGCTACTTCATAGACAGGCACAGTCTCAGTCAAGTGGCT
CCGTGTCCCCGCAAAACTCTCCTAGTGCTACAGGCAGCTTCCTTGAGTCC
GATAGAGGTGTCGAGCTGAAGCCCAGCAGTTTGAGAAGCCCCTTGTTAAA
TAATGTGGGCACTCTTCAGACCTTTGCATCTGGATACGTTCGTTATCTAC
CATTCGCAACTCACGCCAGCCAACTTCAACTGAGTCCTACAGGTACAGGC
TCTTCACTTCCCAGTGTAGACACTGAAATACCAGATGAGAGCGACGACCT
TCAAATTCCGTTGACGAAATGCTCTGTTTCCAGAGATGAGCTGGTAGCTA
TTCTTCCGCCACGTCGGTATTGCGATGCGTTGAAGAATGTCTACTTTCAA
GTATTCTCGCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003702KJC3_003702Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003702-T1KJC3_003702-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003702-T1.cdsKJC3_003702-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003702-T1.exon2KJC3_003702-T1.exon2Aspergillus niger KJC3exon
KJC3_003702-T1.exon1KJC3_003702-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2653030..2654320 -
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