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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2653030..2654320- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003702-T1 ID=KJC3_003702-T1|Name=KJC3_003702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1291bp|location=Sequence derived from alignment at ch3:2653030..2654320- (Aspergillus niger KJC3)
ATGGCCACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCA
AGCATGTCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCC
AGACCTGTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGT
CAGCCCAGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCA
AACACATCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGAC
AGGCACAGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGT
GCTACAGGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAG
CAGTTTGAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTG
CATCTGGATACGTTCGTTATCTACCATTCGCAACTCACGCCAGCCAACTT
CAACTGAGTCCTACAGGTACAGGCTCTTCACTTCCCAGTGTAGACACTGA
AATACCAGATGAGAGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTG
TTTCCAGAGATGAGCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGAT
GCGTTGAAGAATGTCTACTTTCAAGTATTCTCGCCTGTATGTTTTGAACT
CCAATGATTTTCTTGAGCTATTCCTTCGCCAAGTGTCTTTTCATAAGTAC
CTGTGCTAACTCGGGACCTAGATGTTTCATATCCTGCATGACCTGACATT
TGAGGCCGAATACCAACAATTTTGTCACGATTCCAGCAGCGTCACAACAG
CGTGGATTGCGCTACTTTTTGCCATTCTGGGAATTGCCGTCACAGCGCTC
GAGGATGATGAGCCGTTGCTTTCCGATTTAGGTCGTGAGAAGACTGTCAC
CCGTAATATCAAAGTCCTATCATCGCGGTATCGATCCGCCTCGCTGCGCT
GTTTGGCCGCAGATGATGTCCTGTCTCGTCACTCCATCAATTCTCTCCAA
TCCCTTATTCTGATAAATTACGCGCGTATTCACCGGGGGCTTCCTACCTG
GACTCTTTTAGGCTTCACACATCATGTCGCCATATCCATGGGCTGTCATG
TTGACCCAGATCGATTCCCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGA
CGAGCTTGGGCCGGAGTAACTATGCTTTATACTATTCAAAATACAGTTTT
TTGGCCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTG
GAGATCAACGACGTGGACCTACTCACGGGGTCTTTATCTGA back to topCoding sequence (CDS) from alignment at ch3:2653030..2654320- >KJC3_003702-T1 ID=KJC3_003702-T1|Name=KJC3_003702-T1|organism=Aspergillus niger KJC3|type=CDS|length=2412bp|location=Sequence derived from alignment at ch3:2653030..2654320- (Aspergillus niger KJC3)
ATGTTTCATATCCTGCATGACCTGACATTTGAGGCCGAATACCAACAATT
TTGTCACGATTCCAGCAGCGTCACAACAGCGTGGATTGCGCTACTTTTTG
CCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTTGCTT
TCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCCTATC
ATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGATGTCC
TGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAATTAC
GCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCACACA
TCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTCCCGC
TCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGAGTAACT
ATGCTTTATACTATTCAAAATACAGTTTTTTGGCCATCTTGGTCATCATA
TACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGATCAACGACGTGGACCTA
CTCACGGGGTCTTTATCTGAATGGCCACCTCGAATCGCTCAAGCAGCAAG
AGGTTGCCCATAAGTTGCCAAGCATGTCGCTCGAGAAAGATACGCTGCTC
CCGTGACGGACGTCCGTGCCAGACCTGTGTTCGTCGAGGATTGGGCGCTG
AGGACTGCATATACCTGGGTCAGCCCAGGCTGTCCTCTGAGCATGCCTTG
ACGGCAGAGTCTGCGGGGCAAACACATCTGCTCGCACGGATCCGCGACTT
GGAGGAGCTACTTCATAGACAGGCACAGTCTCAGTCAAGTGGCTCCGTGT
CCCCGCAAAACTCTCCTAGTGCTACAGGCAGCTTCCTTGAGTCCGATAGA
GGTGTCGAGCTGAAGCCCAGCAGTTTGAGAAGCCCCTTGTTAAATAATGT
GGGCACTCTTCAGACCTTTGCATCTGGATACGTTCGTTATCTACCATTCG
CAACTCACGCCAGCCAACTTCAACTGAGTCCTACAGGTACAGGCTCTTCA
CTTCCCAGTGTAGACACTGAAATACCAGATGAGAGCGACGACCTTCAAAT
TCCGTTGACGAAATGCTCTGTTTCCAGAGATGAGCTGGTAGCTATTCTTC
CGCCACGTCGGTATTGCGATGCGTTGAAGAATGTCTACTTTCAAGTATTC
TCGCCTATGTTTCATATCCTGCATGACCTGACATTTGAGGCCGAATACCA
ACAATTTTGTCACGATTCCAGCAGCGTCACAACAGCGTGGATTGCGCTAC
TTTTTGCCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCG
TTGCTTTCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGT
CCTATCATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATG
ATGTCCTGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATA
AATTACGCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTT
CACACATCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGAT
TCCCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGA
GTAACTATGCTTTATACTATTCAAAATACAGTTTTTTGGCCATCTTGGTC
ATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGATCAACGACGTG
GACCTACTCACGGGGTCTTTATCTGAATGGCCACCTCGAATCGCTCAAGC
AGCAAGAGGTTGCCCATAAGTTGCCAAGCATGTCGCTCGAGAAAGATACG
CTGCTCCCGTGACGGACGTCCGTGCCAGACCTGTGTTCGTCGAGGATTGG
GCGCTGAGGACTGCATATACCTGGGTCAGCCCAGGCTGTCCTCTGAGCAT
GCCTTGACGGCAGAGTCTGCGGGGCAAACACATCTGCTCGCACGGATCCG
CGACTTGGAGGAGCTACTTCATAGACAGGCACAGTCTCAGTCAAGTGGCT
CCGTGTCCCCGCAAAACTCTCCTAGTGCTACAGGCAGCTTCCTTGAGTCC
GATAGAGGTGTCGAGCTGAAGCCCAGCAGTTTGAGAAGCCCCTTGTTAAA
TAATGTGGGCACTCTTCAGACCTTTGCATCTGGATACGTTCGTTATCTAC
CATTCGCAACTCACGCCAGCCAACTTCAACTGAGTCCTACAGGTACAGGC
TCTTCACTTCCCAGTGTAGACACTGAAATACCAGATGAGAGCGACGACCT
TCAAATTCCGTTGACGAAATGCTCTGTTTCCAGAGATGAGCTGGTAGCTA
TTCTTCCGCCACGTCGGTATTGCGATGCGTTGAAGAATGTCTACTTTCAA
GTATTCTCGCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2653030..2654320 - |
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