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KJC3_003726-T1, KJC3_003726-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003726-T1
Unique NameKJC3_003726-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2783332..2784129-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003726-T1 ID=KJC3_003726-T1|Name=KJC3_003726-T1|organism=Aspergillus niger KJC3|type=mRNA|length=798bp|location=Sequence derived from alignment at ch3:2783332..2784129- (Aspergillus niger KJC3)
ATGTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGG
TGTCGGAAAAACAGCCCTCACAATTCAGGTTAGCCCTTCGCGTACCCGCC
CGCACTGGTGTTCTGACAACTGATCTTTGGACCTTGGTCTTGCCCAACAG
CTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAGACTC
GTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAAGTAC
TGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTGGATC
CGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAGCTTC
TTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAGGAAT
CGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCCGATT
CACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTGGCAA
CAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGGCAGG
CGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAAGAAT
TGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGCGACA
GCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACCGGTT
TGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCGGCCC
GACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTGTGA
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Coding sequence (CDS) from alignment at ch3:2783332..2784129-

>KJC3_003726-T1 ID=KJC3_003726-T1|Name=KJC3_003726-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch3:2783332..2784129- (Aspergillus niger KJC3)
CTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAGACTC
GTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAAGTAC
TGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTGGATC
CGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAGCTTC
TTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAGGAAT
CGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCCGATT
CACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTGGCAA
CAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGGCAGG
CGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAAGAAT
TGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGCGACA
GCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACCGGTT
TGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCGGCCC
GACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTGTGAAT
GTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGGTG
TCGGAAAAACAGCCCTCACAATTCAGCTTTGTCTAAACCATTTCGTTGAG
ACCTACGATCCGACCATCGAAGACTCGTATCGTAAACAAGTCGTGATTGA
TCAACAGTCGTGCATGTTGGAAGTACTGGACACAGCAGGTCAAGAGGAAT
ATACTGCGCTGAGAGACCAGTGGATCCGTGACGGCGAAGGGTTCGTTCTC
GTCTACAGCATCACCTCGAGAGCTTCTTTCTCCCGCATACAGAAATTCTA
CAATCAGATCAAGATGGTCAAGGAATCGGCCAACTCCGGATCGCCCTCGG
GGGCCAGTTACTTGGGATCCCCGATTCACACGCCTTCAGGCCCCCCGCTT
CCGGTGCCGGTCATGTTGGTTGGCAACAAAAGCGACAAAGCCGTCGAGCG
CGCGGTTTCAGCTCAGGAGGGGCAGGCGCTTGCCAAGGATCTCGGTTGCG
AATTCGTCGAGGCCTCCGCGAAGAATTGCATCAATGTGGAGAAGGCATTT
TACGACGTGGTCCGGATGTTGCGACAGCAGCGCCAGCAACAGCAAGGACG
GTCTCAGGATAGACGAACGACCGGTTTGGGTGCCGGGCGTGATCCTGGTC
CCGAGTATCCCAGATCATTCCGGCCCGACCGTACGGGAAGCCATCGCCGC
CCGTTCAAGTGCACAATTCTGTGAATGTCGGGGAAAATGACGTTGTATAA
ATTGGTGGTGCTAGGGGATGGTGGTGTCGGAAAAACAGCCCTCACAATTC
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAS2KJC3_003726Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003726-T1KJC3_003726-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003726-T1.cdsKJC3_003726-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003726-T1.exon2KJC3_003726-T1.exon2Aspergillus niger KJC3exon
KJC3_003726-T1.exon1KJC3_003726-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
ProductRas GTPase ras2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2783332..2784129 -
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