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KJC3_003744-T1, KJC3_003744-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003744-T1
Unique NameKJC3_003744-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2847888..2848791+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003744-T1 ID=KJC3_003744-T1|Name=KJC3_003744-T1|organism=Aspergillus niger KJC3|type=mRNA|length=904bp|location=Sequence derived from alignment at ch3:2847888..2848791+ (Aspergillus niger KJC3)
GTTCACTGCGCTGGCTTTCTCGTCCTTGAAACTTTGGGCGAAATGTCGAC
TACCGAGTCTTCCAATAACGGCTCGCAACCCGGCAATCAGGATACAGGTT
ACATACCTGGCGACGACACTTGGACGCAATGGCGCAATATCTTCTCCATC
CTAGCAGGGCGAATGACTGATGAAGGGAAAGAACAGTTCCGTGTTGCCCG
GGACATTCGGAATGAGGTCGCCGATTGTAAACGTTGCGAGGATCAGCGTG
ATTATCTCTTACAGTTCAGTGAGTCATTTCCCCTTTGCTGTTCGCGGATG
CGCAGGGCTTTGTCACTCACTCAGGATCACAGCTAATGCAAGAAATCACA
AGGTCCCATAATTCGGTTCATGAGTGACAGTATTCGACAGCTTGGGGGAG
ACCTCCATAGCCATAATATTTATTGCCGCCGATGTACCAATCGAAAAGCT
GGAGGCTTCGACCCTGACTATGGTATCTTAATTTGCGCGAATGAGATGAA
GGACCAGGGACATCTGGAGGACACAATGGCTCATGAGATGGTCCACGCCT
ACGATCACCTGAGATTCAAGGTTGACTGGATGAACAATTTGCGGCACGCA
GCTTGTACCGAGGTAATTACTCTCCCGGGATGATGACCACCTGAATTTGA
GATCCATCGGCTGACACAAAAGATAGATTCGAGCCAGCTCCCTTAGTGGG
GAATGTCGGTGGGCGCGCGAGTTCTTCCGGAGGGGTCAGTGGAAGTTTAC
ACAACAGCATCAAGAGTGTGTTAGAAGAAGGGCTATCTTGTCTGTACGAG
CGAGGCCAGGATGCAAGGATGAAGCCCATGCAGAGAAGGTTGTAAACGAA
GTATGGGACAGCTGTTTTAGGGACACCCGCCCCTTCGACGAGATATACCG
ATGA
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Coding sequence (CDS) from alignment at ch3:2847888..2848791+

>KJC3_003744-T1 ID=KJC3_003744-T1|Name=KJC3_003744-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch3:2847888..2848791+ (Aspergillus niger KJC3)
ATGTCGACTACCGAGTCTTCCAATAACGGCTCGCAACCCGGCAATCAGGA
TACAGGTTACATACCTGGCGACGACACTTGGACGCAATGGCGCAATATCT
TCTCCATCCTAGCAGGGCGAATGACTGATGAAGGGAAAGAACAGTTCCGT
GTTGCCCGGGACATTCGGAATGAGGTCGCCGATTGTAAACGTTGCGAGGA
TCAGCGTGATTATCTCTTACAGTTCAGTCCCATAATTCGGTTCATGAGTG
ACAGTATTCGACAGCTTGGGGGAGACCTCCATAGCCATAATATTTATTGC
CGCCGATGTACCAATCGAAAAGCTGGAGGCTTCGACCCTGACTATGGTAT
CTTAATTTGCGCGAATGAGATGAAGGACCAGGGACATCTGGAGGACACAA
TGGCTCATGAGATGGTCCACGCCTACGATCACCTGAGATTCAAGGTTGAC
TGGATGAACAATTTGCGGCACGCAGCTTGTACCGAGATTCGAGCCAGCTC
CCTTAGTGGGGAATGTCGGTGGGCGCGCGAGTTCTTCCGGAGGGGTCAGT
GGAAGTTTACACAACAGCATCAAGAGTGTGTTAGAAGAAGGGCTATCTTG
TCTGTACGAGCGAGGCCAGGATGCAAGGATGAAGCCCATGCAGAGAAGGT
TGTAAACGAAGTATGGGACAGCTGTTTTAGGGACACCCGCCCCTTCGACG
AGATATACCGATGAATGTCGACTACCGAGTCTTCCAATAACGGCTCGCAA
CCCGGCAATCAGGATACAGGTTACATACCTGGCGACGACACTTGGACGCA
ATGGCGCAATATCTTCTCCATCCTAGCAGGGCGAATGACTGATGAAGGGA
AAGAACAGTTCCGTGTTGCCCGGGACATTCGGAATGAGGTCGCCGATTGT
AAACGTTGCGAGGATCAGCGTGATTATCTCTTACAGTTCAGTCCCATAAT
TCGGTTCATGAGTGACAGTATTCGACAGCTTGGGGGAGACCTCCATAGCC
ATAATATTTATTGCCGCCGATGTACCAATCGAAAAGCTGGAGGCTTCGAC
CCTGACTATGGTATCTTAATTTGCGCGAATGAGATGAAGGACCAGGGACA
TCTGGAGGACACAATGGCTCATGAGATGGTCCACGCCTACGATCACCTGA
GATTCAAGGTTGACTGGATGAACAATTTGCGGCACGCAGCTTGTACCGAG
ATTCGAGCCAGCTCCCTTAGTGGGGAATGTCGGTGGGCGCGCGAGTTCTT
CCGGAGGGGTCAGTGGAAGTTTACACAACAGCATCAAGAGTGTGTTAGAA
GAAGGGCTATCTTGTCTGTACGAGCGAGGCCAGGATGCAAGGATGAAGCC
CATGCAGAGAAGGTTGTAAACGAAGTATGGGACAGCTGTTTTAGGGACAC
CCGCCCCTTCGACGAGATATACCGATGAATGTCGACTACCGAGTCTTCCA
ATAACGGCTCGCAACCCGGCAATCAGGATACAGGTTACATACCTGGCGAC
GACACTTGGACGCAATGGCGCAATATCTTCTCCATCCTAGCAGGGCGAAT
GACTGATGAAGGGAAAGAACAGTTCCGTGTTGCCCGGGACATTCGGAATG
AGGTCGCCGATTGTAAACGTTGCGAGGATCAGCGTGATTATCTCTTACAG
TTCAGTCCCATAATTCGGTTCATGAGTGACAGTATTCGACAGCTTGGGGG
AGACCTCCATAGCCATAATATTTATTGCCGCCGATGTACCAATCGAAAAG
CTGGAGGCTTCGACCCTGACTATGGTATCTTAATTTGCGCGAATGAGATG
AAGGACCAGGGACATCTGGAGGACACAATGGCTCATGAGATGGTCCACGC
CTACGATCACCTGAGATTCAAGGTTGACTGGATGAACAATTTGCGGCACG
CAGCTTGTACCGAGATTCGAGCCAGCTCCCTTAGTGGGGAATGTCGGTGG
GCGCGCGAGTTCTTCCGGAGGGGTCAGTGGAAGTTTACACAACAGCATCA
AGAGTGTGTTAGAAGAAGGGCTATCTTGTCTGTACGAGCGAGGCCAGGAT
GCAAGGATGAAGCCCATGCAGAGAAGGTTGTAAACGAAGTATGGGACAGC
TGTTTTAGGGACACCCGCCCCTTCGACGAGATATACCGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP23KJC3_003744Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003744-T1.utr5p1KJC3_003744-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003744-T1.exon1KJC3_003744-T1.exon1Aspergillus niger KJC3exon
KJC3_003744-T1.exon2KJC3_003744-T1.exon2Aspergillus niger KJC3exon
KJC3_003744-T1.exon3KJC3_003744-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003744-T1.cdsKJC3_003744-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003744-T1KJC3_003744-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264RBX
NoteMEROPS:MER0127117
DBxrefInterPro:IPR019165
DBxrefPFAM:PF09768
ProductMitochondrial inner membrane protease atp23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2847888..2848791 +
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