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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2852439..2853625+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003747-T1 ID=KJC3_003747-T1|Name=KJC3_003747-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1187bp|location=Sequence derived from alignment at ch3:2852439..2853625+ (Aspergillus niger KJC3)
ATTGTACTCAAGGCCCCCATCTACAATCTCATGCAACAAGGTTTCATTCG
GTCCAAGCGAGCATAAACACCGACCAGAAGCAATCAGGTGGTGGTGATAT
ACAGACATCCAGCAATGCCCTCCGCAGGCTCGAAGACTCTGTCCCTTCGG
GGGCTCTACAATTTTCAATGCCCGCGGCCCCAGGTACGGCCTCATCTGGC
AGAGAAAACAAATGGATAACGTTCCGTCTGACAAGGCAATCATATTAGGT
ACAAACGTATAACAAGACACACCTTCCATCAATTCACGGCTTGAAGCCCT
CGGTGTCTCACCGCCACATTAGCCATCAGCAACAGCCGCTAGCCTCATGC
TTCGTTCTTCCTTCGCAAAGTCGCCGGAATTCTTCCCAGCTAGCTCGTGC
GATCGGGCCGCGCCCGGGTACTGCAGCAGAAACCTACGTTGCTTACGGAA
TGACGCAAAAACTATTCGAAGCCTGCTCCAAACAAGCAGACTACAAGATA
CCTCAGTTGTCTCAGAAGGGGGCTCAGGTGCCCAAGACAAGTGCCGGGGA
AGACTTGGGAGTAGGTGAAGGATGGTGGTATGAAGGTGAGTTTACTCTAA
GTGTCTTCATTTCGTAGATGGAGGCGCGTGGTACCTAGGGGTGCGCGGCT
AAAGAGCTCAATTAAATAGAATTGGGCCTCGTTCCTACTTTCTCAACATG
GTCGCAGGTTACGTTCCTGCACATGTACCTATTGACGGTCCGGTTGCGCG
CGTTGCCGTCGCATGACAGCCTTCAAACCTACTCACGGCACTTAATCGAC
CACTTCTCACATAGTGCCGAACATCGCATGGATGTGCTTCACGGATTGAC
GAGCCGCGGTATACGCAATAAGTTTCTCAAGGATCTTTTTATCCAGTGGC
GCGGTGTTTTGGCAGCCTACGACGAAGGTCTAATCAAAGGAGATGCAGTG
CTGGGAGCTGCCGTTTGGAGAAACCTCTGGAAGGCGAGCCATACTGCACC
AGACGGTAAGGACTTGGATTGGTCGAAGATAGCTCAGGTCGTCGCGTATA
TGCGGCGAGTGCTCTCCGAACTCTCTCAGGTGCATGAAGCGGATTTGGTC
TTCCAATTGGACCGGCAAAGGAACGGGAAGCCGGGTATTTTCTCTTATTC
CGATGTCGATCAAAAGATGGTCGATAGCAAGCGGTGA back to topCoding sequence (CDS) from alignment at ch3:2852439..2853625+ >KJC3_003747-T1 ID=KJC3_003747-T1|Name=KJC3_003747-T1|organism=Aspergillus niger KJC3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch3:2852439..2853625+ (Aspergillus niger KJC3)
ATGCCCTCCGCAGGCTCGAAGACTCTGTCCCTTCGGGGGCTCTACAATTT
TCAATGCCCGCGGCCCCAGGTACAAACGTATAACAAGACACACCTTCCAT
CAATTCACGGCTTGAAGCCCTCGGTGTCTCACCGCCACATTAGCCATCAG
CAACAGCCGCTAGCCTCATGCTTCGTTCTTCCTTCGCAAAGTCGCCGGAA
TTCTTCCCAGCTAGCTCGTGCGATCGGGCCGCGCCCGGGTACTGCAGCAG
AAACCTACGTTGCTTACGGAATGACGCAAAAACTATTCGAAGCCTGCTCC
AAACAAGCAGACTACAAGATACCTCAGTTGTCTCAGAAGGGGGCTCAGGT
GCCCAAGACAAGTGCCGGGGAAGACTTGGGAGTAGGTGAAGGATGGTGGT
ATGAAGAATTGGGCCTCGTTCCTACTTTCTCAACATGGTCGCAGGTTACG
TTCCTGCACATGTACCTATTGACGGTCCGGTTGCGCGCGTTGCCGTCGCA
TGACAGCCTTCAAACCTACTCACGGCACTTAATCGACCACTTCTCACATA
GTGCCGAACATCGCATGGATGTGCTTCACGGATTGACGAGCCGCGGTATA
CGCAATAAGTTTCTCAAGGATCTTTTTATCCAGTGGCGCGGTGTTTTGGC
AGCCTACGACGAAGGTCTAATCAAAGGAGATGCAGTGCTGGGAGCTGCCG
TTTGGAGAAACCTCTGGAAGGCGAGCCATACTGCACCAGACGGTAAGGAC
TTGGATTGGTCGAAGATAGCTCAGGTCGTCGCGTATATGCGGCGAGTGCT
CTCCGAACTCTCTCAGGTGCATGAAGCGGATTTGGTCTTCCAATTGGACC
GGCAAAGGAACGGGAAGCCGGGTATTTTCTCTTATTCCGATGTCGATCAA
AAGATGGTCGATAGCAAGCGGTGAATGCCCTCCGCAGGCTCGAAGACTCT
GTCCCTTCGGGGGCTCTACAATTTTCAATGCCCGCGGCCCCAGGTACAAA
CGTATAACAAGACACACCTTCCATCAATTCACGGCTTGAAGCCCTCGGTG
TCTCACCGCCACATTAGCCATCAGCAACAGCCGCTAGCCTCATGCTTCGT
TCTTCCTTCGCAAAGTCGCCGGAATTCTTCCCAGCTAGCTCGTGCGATCG
GGCCGCGCCCGGGTACTGCAGCAGAAACCTACGTTGCTTACGGAATGACG
CAAAAACTATTCGAAGCCTGCTCCAAACAAGCAGACTACAAGATACCTCA
GTTGTCTCAGAAGGGGGCTCAGGTGCCCAAGACAAGTGCCGGGGAAGACT
TGGGAGTAGGTGAAGGATGGTGGTATGAAGAATTGGGCCTCGTTCCTACT
TTCTCAACATGGTCGCAGGTTACGTTCCTGCACATGTACCTATTGACGGT
CCGGTTGCGCGCGTTGCCGTCGCATGACAGCCTTCAAACCTACTCACGGC
ACTTAATCGACCACTTCTCACATAGTGCCGAACATCGCATGGATGTGCTT
CACGGATTGACGAGCCGCGGTATACGCAATAAGTTTCTCAAGGATCTTTT
TATCCAGTGGCGCGGTGTTTTGGCAGCCTACGACGAAGGTCTAATCAAAG
GAGATGCAGTGCTGGGAGCTGCCGTTTGGAGAAACCTCTGGAAGGCGAGC
CATACTGCACCAGACGGTAAGGACTTGGATTGGTCGAAGATAGCTCAGGT
CGTCGCGTATATGCGGCGAGTGCTCTCCGAACTCTCTCAGGTGCATGAAG
CGGATTTGGTCTTCCAATTGGACCGGCAAAGGAACGGGAAGCCGGGTATT
TTCTCTTATTCCGATGTCGATCAAAAGATGGTCGATAGCAAGCGGTGAAT
GCCCTCCGCAGGCTCGAAGACTCTGTCCCTTCGGGGGCTCTACAATTTTC
AATGCCCGCGGCCCCAGGTACAAACGTATAACAAGACACACCTTCCATCA
ATTCACGGCTTGAAGCCCTCGGTGTCTCACCGCCACATTAGCCATCAGCA
ACAGCCGCTAGCCTCATGCTTCGTTCTTCCTTCGCAAAGTCGCCGGAATT
CTTCCCAGCTAGCTCGTGCGATCGGGCCGCGCCCGGGTACTGCAGCAGAA
ACCTACGTTGCTTACGGAATGACGCAAAAACTATTCGAAGCCTGCTCCAA
ACAAGCAGACTACAAGATACCTCAGTTGTCTCAGAAGGGGGCTCAGGTGC
CCAAGACAAGTGCCGGGGAAGACTTGGGAGTAGGTGAAGGATGGTGGTAT
GAAGAATTGGGCCTCGTTCCTACTTTCTCAACATGGTCGCAGGTTACGTT
CCTGCACATGTACCTATTGACGGTCCGGTTGCGCGCGTTGCCGTCGCATG
ACAGCCTTCAAACCTACTCACGGCACTTAATCGACCACTTCTCACATAGT
GCCGAACATCGCATGGATGTGCTTCACGGATTGACGAGCCGCGGTATACG
CAATAAGTTTCTCAAGGATCTTTTTATCCAGTGGCGCGGTGTTTTGGCAG
CCTACGACGAAGGTCTAATCAAAGGAGATGCAGTGCTGGGAGCTGCCGTT
TGGAGAAACCTCTGGAAGGCGAGCCATACTGCACCAGACGGTAAGGACTT
GGATTGGTCGAAGATAGCTCAGGTCGTCGCGTATATGCGGCGAGTGCTCT
CCGAACTCTCTCAGGTGCATGAAGCGGATTTGGTCTTCCAATTGGACCGG
CAAAGGAACGGGAAGCCGGGTATTTTCTCTTATTCCGATGTCGATCAAAA
GATGGTCGATAGCAAGCGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003747-T1.utr5p1 | KJC3_003747-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021150 |
| DBxref | PFAM:PF03981 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2852439..2853625 + |
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