You are here

Home

KJC3_003761-T2, KJC3_003761-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003761-T2
Unique NameKJC3_003761-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2890404..2892609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003761-T2 ID=KJC3_003761-T2|Name=KJC3_003761-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2206bp|location=Sequence derived from alignment at ch3:2890404..2892609- (Aspergillus niger KJC3)
CTGTTAACCACTCCCCTCAACGACCCGCCGCGCTTATCTTTCGTCCCTTA
TTTGTACTCAACTAGCCACTACTCAGTTACAGGTCAACAACCCAAAGAAG
ATGGCAGAGATTCTCTCACATCTCACATCCGCCTCGTCCGAACTTCGTTC
AGTAAATAATACGCGCGATGAAAGATATGACACGCAAATCCGTGACCTGG
TTGCATACATCAAGAATTGCGATAAGAATTCTGACACTCAATATCTCCTA
GATGTAAGCACAGCCAGAATCTTCACGGGTGAAAGTGGAAGAGCATGGCT
AGTGGGTTCTTATGCAAGATGGTATAAGCCATGCTTACGAATATGACCAT
TTACCTCGCAGAATCTCCATCCATCACTGCACACGTTATCCTACCTGTTG
ATTCTTAACCTTCACATCGACAACCTACAAATAAGGGCGAAGGAAAACCT
GCCGGATGAGATCAAGCCCGGGAATGACTTGTGGACTAGAGTGGCCTACT
TTCTCCAACATTTTGATCCCATCCAGGTACGGTATGCTGGCCATGAGTGG
CGCCGACTTGTTGAACTCCTGGCACAAGCTGCCGAAGTTACTGCAAAGGT
AGGCTCACTCCAAGCCAATGTGCCAACGTGAACTGTTTCTTTGCTTTATA
GTTGACCCCCAATAGCCGTTCCTAGCGGTCCAAGTGATGAAAGAAGCGTT
GCTTCGACTCAACTCACCTGGTATCCTTACATCATTACACGTTACGTTCC
TCAGACTTTCTCTTCTTTCCAAGTCTTATCATTATGCTTTACCGGTTATG
GAAAGATGGATATTCCAGTTTCCCGCCAGTTCAGTCCAAGCCTACCGCAA
GCATATCAGTCGTCCCTTGTGTTCCGAAGACACTTTTGGCGACACTTTCA
TCTCCGATGCATCTGGCTTCTCTGCAAAGCTGACATATCGAGATCATATG
AGATTCTTCCTGTATGGCGCGATGATTTACTTGGCCCTGAAAAAATGGGA
TAAGGCGTTACATTGGCTAAGCGTCGTCATATCGTCCCCTGTCAATGACT
CTGTCAGCAAAATCATGGTTGAAGGCTATAAGAAGTGGGTATTAGCTAGC
TTGCTAGCGCATGGAAAGGTAGTCAGAATGCAACGAAACATCCAACATAC
GCTTATGACTGACATACGCTGTTGTTATAGTTGATCTCATCGCCTAGAGT
GATCTCTGCACACGTTCTGAAAGTATTCCAAACGTTAACAAAACCTTACG
CATCCTTGGCAGACGCTTTTGAGAGGGGCGACCTTCCAAGGTTGAGAGCT
GAAATTGATATTGGTCGATCTATTTGGCGTGCTGTATGTTAGCAGACGAG
GGTACATTTATCAACATAGCAGATAGGCTGACCTTCTTCTAGGACAATAA
CGAGGGCCTGGTTTCTCAGCTGTTCCATGCCTACAATTCGTTCCTTGTTA
TGAAGCTAGGAAGAACTTTCTCGGCTCTCACTACAGCGGATGTGGCACAA
CGCACACTTGCGCCGTTGGCATTCTCTGCGAGTATCGAAGAGTTCGTGGC
GTTGCTCGTAATGTCTGGCACCCTCAGCGCTACTCTACTACATCTACATG
GTCAAGCAGATGCAACAATGCTTCGGTTTCTTGCGCGCAGTGAATCTTAC
TTATATGGAGAGATATCCATGCGAACACGCTTGGTCGAAGAGGCTCGGGT
ACTAGGTCTAATAACGAAAGATGCTAACCAATGTAGCAGTGAGTTGCAGC
TGGGAAACGAGAGTCTCCAAATCCTATCTAGAAATCAGAGGTGGCCTGAT
GCGTCAAGGGTCAGTGGCGATGCTGTTGGAGAATCAGATGGTGGTTTGGA
CATCGATGAAGACATTATGGGAGATGGTACCTGAAGTACAAGGAAACATC
AGTGAATACCATGCCGACCTTGACCATATCCAATAGCGGAACTAGAAACA
GGGCTCAAGCAATGTGTAGCCCAAGCCGAATTTTGCCAACAGTCCTGTAT
TTGTATGGTCCGCCTATCATGGCGCGCTCGGTACATCAATTTATGCTGTC
TCCTGTTCAGGTCACTGCCTCTTAGGGGATATGTGGGTATCATTAATAAC
GGCTAATATGGAAGCTGCGGCGTCTACCATGACTATAGCTATCTTACCCC
AGAGTAAATCAATTATATACAGATATGGCCATAGTATGAAGCACGTATTA
ATGGCC
back to top

Coding sequence (CDS) from alignment at ch3:2890404..2892609-

>KJC3_003761-T2 ID=KJC3_003761-T2|Name=KJC3_003761-T2|organism=Aspergillus niger KJC3|type=CDS|length=3231bp|location=Sequence derived from alignment at ch3:2890404..2892609- (Aspergillus niger KJC3)
GACAATAACGAGGGCCTGGTTTCTCAGCTGTTCCATGCCTACAATTCGTT
CCTTGTTATGAAGCTAGGAAGAACTTTCTCGGCTCTCACTACAGCGGATG
TGGCACAACGCACACTTGCGCCGTTGGCATTCTCTGCGAGTATCGAAGAG
TTCGTGGCGTTGCTCGTAATGTCTGGCACCCTCAGCGCTACTCTACTACA
TCTACATGGTCAAGCAGATGCAACAATGCTTCGGTTTCTTGCGCGCAGTG
AATCTTACTTATATGGAGAGATATCCATGCGAACACGCTTGGTCGAAGAG
GCTCGGGTACTAGGTCTAATAACGAAAGATGCTAACCAATGTAGCAGTGA
GTTGCAGCTGGGAAACGAGAGTCTCCAAATCCTATCTAGAAATCAGAGGT
GGCCTGATGCGTCAAGGGTCAGTGGCGATGCTGTTGGAGAATCAGATGGT
GGTTTGGACATCGATGAAGACATTATGGGAGATGGTACCTGATTGATCTC
ATCGCCTAGAGTGATCTCTGCACACGTTCTGAAAGTATTCCAAACGTTAA
CAAAACCTTACGCATCCTTGGCAGACGCTTTTGAGAGGGGCGACCTTCCA
AGGTTGAGAGCTGAAATTGATATTGGTCGATCTATTTGGCGTGCTATGAA
AGAAGCGTTGCTTCGACTCAACTCACCTGGTATCCTTACATCATTACACG
TTACGTTCCTCAGACTTTCTCTTCTTTCCAAGTCTTATCATTATGCTTTA
CCGGTTATGGAAAGATGGATATTCCAGTTTCCCGCCAGTTCAGTCCAAGC
CTACCGCAAGCATATCAGTCGTCCCTTGTGTTCCGAAGACACTTTTGGCG
ACACTTTCATCTCCGATGCATCTGGCTTCTCTGCAAAGCTGACATATCGA
GATCATATGAGATTCTTCCTGTATGGCGCGATGATTTACTTGGCCCTGAA
AAAATGGGATAAGGCGTTACATTGGCTAAGCGTCGTCATATCGTCCCCTG
TCAATGACTCTGTCAGCAAAATCATGGTTGAAGGCTATAAGAAGTGGGTA
TTAGCTAGCTTGCTAGCGCATGGAAAGGACAATAACGAGGGCCTGGTTTC
TCAGCTGTTCCATGCCTACAATTCGTTCCTTGTTATGAAGCTAGGAAGAA
CTTTCTCGGCTCTCACTACAGCGGATGTGGCACAACGCACACTTGCGCCG
TTGGCATTCTCTGCGAGTATCGAAGAGTTCGTGGCGTTGCTCGTAATGTC
TGGCACCCTCAGCGCTACTCTACTACATCTACATGGTCAAGCAGATGCAA
CAATGCTTCGGTTTCTTGCGCGCAGTGAATCTTACTTATATGGAGAGATA
TCCATGCGAACACGCTTGGTCGAAGAGGCTCGGGTACTAGGTCTAATAAC
GAAAGATGCTAACCAATGTAGCAGTGAGTTGCAGCTGGGAAACGAGAGTC
TCCAAATCCTATCTAGAAATCAGAGGTGGCCTGATGCGTCAAGGGTCAGT
GGCGATGCTGTTGGAGAATCAGATGGTGGTTTGGACATCGATGAAGACAT
TATGGGAGATGGTACCTGATTGATCTCATCGCCTAGAGTGATCTCTGCAC
ACGTTCTGAAAGTATTCCAAACGTTAACAAAACCTTACGCATCCTTGGCA
GACGCTTTTGAGAGGGGCGACCTTCCAAGGTTGAGAGCTGAAATTGATAT
TGGTCGATCTATTTGGCGTGCTATGAAAGAAGCGTTGCTTCGACTCAACT
CACCTGGTATCCTTACATCATTACACGTTACGTTCCTCAGACTTTCTCTT
CTTTCCAAGTCTTATCATTATGCTTTACCGGTTATGGAAAGATGGATATT
CCAGTTTCCCGCCAGTTCAGTCCAAGCCTACCGCAAGCATATCAGTCGTC
CCTTGTGTTCCGAAGACACTTTTGGCGACACTTTCATCTCCGATGCATCT
GGCTTCTCTGCAAAGCTGACATATCGAGATCATATGAGATTCTTCCTGTA
TGGCGCGATGATTTACTTGGCCCTGAAAAAATGGGATAAGGCGTTACATT
GGCTAAGCGTCGTCATATCGTCCCCTGTCAATGACTCTGTCAGCAAAATC
ATGGTTGAAGGCTATAAGAAGTGGGTATTAGCTAGCTTGCTAGCGCATGG
AAAGGACAATAACGAGGGCCTGGTTTCTCAGCTGTTCCATGCCTACAATT
CGTTCCTTGTTATGAAGCTAGGAAGAACTTTCTCGGCTCTCACTACAGCG
GATGTGGCACAACGCACACTTGCGCCGTTGGCATTCTCTGCGAGTATCGA
AGAGTTCGTGGCGTTGCTCGTAATGTCTGGCACCCTCAGCGCTACTCTAC
TACATCTACATGGTCAAGCAGATGCAACAATGCTTCGGTTTCTTGCGCGC
AGTGAATCTTACTTATATGGAGAGATATCCATGCGAACACGCTTGGTCGA
AGAGGCTCGGGTACTAGGTCTAATAACGAAAGATGCTAACCAATGTAGCA
GTGAGTTGCAGCTGGGAAACGAGAGTCTCCAAATCCTATCTAGAAATCAG
AGGTGGCCTGATGCGTCAAGGGTCAGTGGCGATGCTGTTGGAGAATCAGA
TGGTGGTTTGGACATCGATGAAGACATTATGGGAGATGGTACCTGATTGA
TCTCATCGCCTAGAGTGATCTCTGCACACGTTCTGAAAGTATTCCAAACG
TTAACAAAACCTTACGCATCCTTGGCAGACGCTTTTGAGAGGGGCGACCT
TCCAAGGTTGAGAGCTGAAATTGATATTGGTCGATCTATTTGGCGTGCTA
TGAAAGAAGCGTTGCTTCGACTCAACTCACCTGGTATCCTTACATCATTA
CACGTTACGTTCCTCAGACTTTCTCTTCTTTCCAAGTCTTATCATTATGC
TTTACCGGTTATGGAAAGATGGATATTCCAGTTTCCCGCCAGTTCAGTCC
AAGCCTACCGCAAGCATATCAGTCGTCCCTTGTGTTCCGAAGACACTTTT
GGCGACACTTTCATCTCCGATGCATCTGGCTTCTCTGCAAAGCTGACATA
TCGAGATCATATGAGATTCTTCCTGTATGGCGCGATGATTTACTTGGCCC
TGAAAAAATGGGATAAGGCGTTACATTGGCTAAGCGTCGTCATATCGTCC
CCTGTCAATGACTCTGTCAGCAAAATCATGGTTGAAGGCTATAAGAAGTG
GGTATTAGCTAGCTTGCTAGCGCATGGAAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003761KJC3_003761Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003761-T2KJC3_003761-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003761-T2.cdsKJC3_003761-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003761-T2.utr3p1KJC3_003761-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003761-T2.exon4KJC3_003761-T2.exon4Aspergillus niger KJC3exon
KJC3_003761-T2.exon3KJC3_003761-T2.exon3Aspergillus niger KJC3exon
KJC3_003761-T2.exon2KJC3_003761-T2.exon2Aspergillus niger KJC3exon
KJC3_003761-T2.exon1KJC3_003761-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003761-T2.utr5p2KJC3_003761-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003761-T2.utr5p1KJC3_003761-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2890404..2892609 -
Powered by Drupal