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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3007605..3008578+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003774-T1 ID=KJC3_003774-T1|Name=KJC3_003774-T1|organism=Aspergillus niger KJC3|type=mRNA|length=974bp|location=Sequence derived from alignment at ch3:3007605..3008578+ (Aspergillus niger KJC3)
GTCGGGAAGTCTTAAAAACTCAAGTAGGCTCCGAGACAAAGTTCATCAAC
CTATAATTCAAAGCGCCACACTTAATTGTTGCGATTTCTCTTTCATTGTT
CTGCATCAAATATACCGCTTTTTGACACAGCGCAGGACCGCTCATCTCAC
GTCCAGGCTAATACTCGGTAGGGTCTTCTCGTTGTTGTGGCGGAGAATGA
GTACCGATGTGGAAAGAGTTTATGCGGTGCATTCTATACTTCATTTGATC
TTTCATCGAAATAAAAACCAACATCGAGGGACTAAGTGGTGGAAATGGTT
GTCGATATTGAAACGAGTCACCTTGAAGCTCGCCAGATCCCTTGACCATC
AGCAGTCATATGGCAGTGTTGAGTCTTCTGCTGATCAACTTAGACATCAC
TTGTTGACCTATGTTATGCCGAAGTGCTACCAGTAAGTTAGGAGAGCGAA
CAACAAACGAAATCTCAGCGACTTCGCTTCATCCGACGCCGCCAAGCACA
ATTGCTGATTTGATATCCAGAGCATTCTCCGCAGTTGTTGCCGATGGACA
GTTCTCTACTCTGGGAACAGTCTTGATAGCCACTCTTGCCCGTTTGGCAA
AAGCTACAGAGATCGATAAGGAGTTGAAGTTGCCATCAAACACAGAAAAG
GCTTCCACTGGCCCCGTCTACAGCACCGGTGCGCAACGAAGAGAGGACAT
GGGAGTCGTCCTCTGCCGCCCTGCATGTTCTTCAACACCCACTTTGCCAC
ACAGGACTCAAGTCCCGGGAAGCTCACGTCGAGCTCGCGATGAGAGATCT
CTAAAGGCCCCGAAAGGCACCGTAGGCTCGAAAGAGAAAAGCATGCGAAA
GAAGAAGCGGAAAAAGGATGCTATCGATGATCTATTCGATAGCCTTCTAT
AGGAGCAGAAAGCGGGTCTCGCTGACATGACTTGAACGCTAGCCACTAGA
TATACATTTTAAAGAGCATAACTT back to topCoding sequence (CDS) from alignment at ch3:3007605..3008578+ >KJC3_003774-T1 ID=KJC3_003774-T1|Name=KJC3_003774-T1|organism=Aspergillus niger KJC3|type=CDS|length=1236bp|location=Sequence derived from alignment at ch3:3007605..3008578+ (Aspergillus niger KJC3)
ATGAGTACCGATGTGGAAAGAGTTTATGCGGTGCATTCTATACTTCATTT
GATCTTTCATCGAAATAAAAACCAACATCGAGGGACTAAGTGGTGGAAAT
GGTTGTCGATATTGAAACGAGTCACCTTGAAGCTCGCCAGATCCCTTGAC
CATCAGCAGTCATATGGCAGTGTTGAGTCTTCTGCTGATCAACTTAGACA
TCACTTGTTGACCTATGTTATGCCGAAGTGCTACCAAGCATTCTCCGCAG
TTGTTGCCGATGGACAGTTCTCTACTCTGGGAACAGTCTTGATAGCCACT
CTTGCCCGTTTGGCAAAAGCTACAGAGATCGATAAGGAGTTGAAGTTGCC
ATCAAACACAGAAAAGGCTTCCACTGGCCCCGTCTACAGCACCGGTGCGC
AACGAAGAGAGGACATGGGAGTCGTCCTCTGCCGCCCTGCATGTTCTTCA
ACACCCACTTTGCCACACAGGACTCAAGTCCCGGGAAGCTCACGTCGAGC
TCGCGATGAGAGATCTCTAAAGGCCCCGAAAGGCACCGTAGGCTCGAAAG
AGAAAAGCATGCGAAAGAAGAAGCGGAAAAAGGATGCTATCGATGATCTA
TTCGATAGCCTTCTATAGATGAGTACCGATGTGGAAAGAGTTTATGCGGT
GCATTCTATACTTCATTTGATCTTTCATCGAAATAAAAACCAACATCGAG
GGACTAAGTGGTGGAAATGGTTGTCGATATTGAAACGAGTCACCTTGAAG
CTCGCCAGATCCCTTGACCATCAGCAGTCATATGGCAGTGTTGAGTCTTC
TGCTGATCAACTTAGACATCACTTGTTGACCTATGTTATGCCGAAGTGCT
ACCAAGCATTCTCCGCAGTTGTTGCCGATGGACAGTTCTCTACTCTGGGA
ACAGTCTTGATAGCCACTCTTGCCCGTTTGGCAAAAGCTACAGAGATCGA
TAAGGAGTTGAAGTTGCCATCAAACACAGAAAAGGCTTCCACTGGCCCCG
TCTACAGCACCGGTGCGCAACGAAGAGAGGACATGGGAGTCGTCCTCTGC
CGCCCTGCATGTTCTTCAACACCCACTTTGCCACACAGGACTCAAGTCCC
GGGAAGCTCACGTCGAGCTCGCGATGAGAGATCTCTAAAGGCCCCGAAAG
GCACCGTAGGCTCGAAAGAGAAAAGCATGCGAAAGAAGAAGCGGAAAAAG
GATGCTATCGATGATCTATTCGATAGCCTTCTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003774-T1.utr5p1 | KJC3_003774-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003774-T1.utr3p1 | KJC3_003774-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3007605..3008578 + |
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