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KJC3_003778-T1, KJC3_003778-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003778-T1
Unique NameKJC3_003778-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3015760..3016781+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003778-T1 ID=KJC3_003778-T1|Name=KJC3_003778-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1022bp|location=Sequence derived from alignment at ch3:3015760..3016781+ (Aspergillus niger KJC3)
CGCCAGCGTACAAGGGTGATCTGCTATTACAAATTCACCGAGTTCACTTT
CTTCGAGTAATCCAGGCTACCCTACGATAATAAGGCTCCTCCACAACCGT
GGTCACTTTAACACCTTTTACAATGTCGTTGGATACACCAGCTTCATCCC
TCAGTGCTTCAGATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGAT
TTCCTCCTGATAGAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACT
TGCGTCAGAAGAGAAGCTACCAGATGATGAAGAAATCCGGGAAACTACAT
TCTTTCGCCTCGAATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAA
CGGTACGCTTGAAAGTCCGCTATTCGCCTTTGCGACGTCCTTTCGGCCCT
CCAAGTTATGAATCCATTTGACAGGTGGATATGCATAAGAACAACATGAT
CACCGACAGATCGCAGGTGCTATTGATGGAAGTCCCGCAGCTAATGCATA
TCTGTTGTCGACCGGAGCAGATTCTCGCGCGATCGCCCACGATTTGCAGA
TAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGGACGATACTCT
TTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGGTAGGCAGAACG
AAATGCGGCCCCAAATCTCTATGAAGTGCCCTGGTTCGCATTTTGGGGGA
AGAGGCTAATACCTGCACTACCAGGGCGTGTATGTCTTGACTGATAACTC
TTTTCGACCATTTGCAAGGATGAGTACGTCTGTTCGAAGTGAGGCGGTAT
CTATGGCCCAAGCGGTGTGTTTGTCCCGGGATACACGTATCCCCCAACAT
GTCAACTTTACATGATCTAACGACTTGCGGTAAATTATAGTATCTATGGT
TTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACC
ACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAA
AACCGTCAACCCCAAGCCCTGA
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Coding sequence (CDS) from alignment at ch3:3015760..3016781+

>KJC3_003778-T1 ID=KJC3_003778-T1|Name=KJC3_003778-T1|organism=Aspergillus niger KJC3|type=CDS|length=2280bp|location=Sequence derived from alignment at ch3:3015760..3016781+ (Aspergillus niger KJC3)
ATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGC
GCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCC
CCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCA
GATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGG
TTACAGGGTTGGACAAGGGTTGGCTGAACGATTCTCGCGCGATCGCCCAC
GATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGG
ACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGGG
CGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTA
CGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGTATCTATGGTTT
CCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACCAC
AGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAAAA
CCGTCAACCCCAAGCCCTGAATGTCGTTGGATACACCAGCTTCATCCCTC
AGTGCTTCAGATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGATTT
CCTCCTGATAGAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACTTG
CGTCAGAAGAGAAGCTACCAGATGATGAAGAAATCCGGGAAACTACATTC
TTTCGCCTCGAATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAACG
ATTCTCGCGCGATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGT
TCCTGTGCAAGGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAAC
CTGAAAACGAATCACCGGGGCGTGTATGTCTTGACTGATAACTCTTTTCG
ACCATTTGCAAGGATGAGTACGTCTGTTCGAAGTGAGGCGGTATCTATGG
CCCAAGCGTATCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCA
AACCTTGGTATTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGG
CGCAACCTTCCAAATCAAAACCGTCAACCCCAAGCCCTGAATGTCGTTGG
ATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGCGCGGCTCCTG
GGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCCCCATGGCGGA
GCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCAGATGATGAAG
AAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGGTTACAGGGTT
GGACAAGGGTTGGCTGAACGATTCTCGCGCGATCGCCCACGATTTGCAGA
TAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGGACGATACTCT
TTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGGGCGTGTATGTC
TTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTACGTCTGTTCG
AAGTGAGGCGGTATCTATGGCCCAAGCGTATCTATGGTTTCCATGCGGTG
TTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACCACAGTTCAAGCG
GAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAAAACCGTCAACCC
CAAGCCCTGAATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAG
ATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATA
GAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGA
GAAGCTACCAGATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCG
AATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAACGATTCTCGCGC
GATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAA
GGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGA
ATCACCGGGGCGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCA
AGGATGAGTACGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGTA
TCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTA
TTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTC
CAAATCAAAACCGTCAACCCCAAGCCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
GO:0043087regulation of GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003778KJC3_003778Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003778-T1KJC3_003778-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003778-T1.utr5p1KJC3_003778-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003778-T1.exon1KJC3_003778-T1.exon1Aspergillus niger KJC3exon
KJC3_003778-T1.exon2KJC3_003778-T1.exon2Aspergillus niger KJC3exon
KJC3_003778-T1.exon3KJC3_003778-T1.exon3Aspergillus niger KJC3exon
KJC3_003778-T1.exon4KJC3_003778-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003778-T1.cdsKJC3_003778-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09263RY2
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR037992
DBxrefInterPro:IPR007194
DBxrefPFAM:PF04051
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3015760..3016781 +
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