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KJC3_003796-T1, KJC3_003796-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003796-T1
Unique NameKJC3_003796-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3069420..3071062+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003796-T1 ID=KJC3_003796-T1|Name=KJC3_003796-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1643bp|location=Sequence derived from alignment at ch3:3069420..3071062+ (Aspergillus niger KJC3)
ATCAGCTCGCGGTCTTCTTCGCCAGATGGTATTGTCGAGGCAAAGATGCT
AATTAGGTCCTGTTTCAACCCTCCATGCGACCATTTCTCCGACGCTTTAC
GTCTCTCAAACGCCCCTCCGTCATGAAGCCGCTCATCGCTGTCGTTGGTG
CCACAGGCACGGGCAAGTCAAAGGTGAGAGCGTTTACCCAGCCCGGGATC
CTGGAATTTCCTTCCTTTTGTAAGAGACTGCTTACTGACGGTTGCAGTTA
GCTTGCAGTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCG
ATGCCATGCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCC
GTCGAGGAGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCT
CGAGGAACAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGAC
TCATTGACGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGT
ACCCATTACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGA
GGATGCTACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGG
AAGATAACGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCC
ACTGAGGTGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGA
TCGATGGCACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATAT
ATTTCCAGACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGG
ACAAAGCAGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCA
CTTGCGATTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGC
TGAACAGTCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTG
ATGACAGAAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCA
GGGCGTCTCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACA
AGGAGCTAGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAG
GCCGAGCTAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGC
AACGCGGCAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTAT
GGCAGGCCCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGAC
AGCACTAATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACG
TCTTGTCCGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCAC
TGTCAGAACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACAT
AAGGAGTCGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAA
GACCATGATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCC
ATAGGAGAGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATAT
CTACGAAAGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGA
ATCTCCCGCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAA
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Coding sequence (CDS) from alignment at ch3:3069420..3071062+

>KJC3_003796-T1 ID=KJC3_003796-T1|Name=KJC3_003796-T1|organism=Aspergillus niger KJC3|type=CDS|length=2982bp|location=Sequence derived from alignment at ch3:3069420..3071062+ (Aspergillus niger KJC3)
ATGCGACCATTTCTCCGACGCTTTACGTCTCTCAAACGCCCCTCCGTCAT
GAAGCCGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGC
TTGCAGTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGAT
GCCATGCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCGT
CGAGGAGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTCG
AGGAACAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACTC
ATTGACGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTAC
CCATTACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAGG
ATGCTACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGAA
GATAACGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCAC
TGAGGTGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGATC
GATGGCACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATAT
TTCCAGACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGAC
AAAGCAGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCACT
TGCGATTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCTG
AACAGTCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGAT
GACAGAAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAGG
GCGTCTCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAAG
GAGCTAGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGGC
CGAGCTAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCAA
CGCGGCAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATGG
CAGGCCCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACAG
CACTAATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGTC
TTGTCCGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACTG
TCAGAACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATAA
GGAGTCGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAGA
CCATGATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCAT
AGGAGAGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATCT
ACGAAAGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAAT
CTCCCGCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGCGACCA
TTTCTCCGACGCTTTACGTCTCTCAAACGCCCCTCCGTCATGAAGCCGCT
CATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGCTTGCAGTCG
ACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGATGCCATGCAA
ATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCGTCGAGGAGCG
AAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAACAGC
CGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGACGAC
ATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATTACTA
TACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCTACTG
CAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGAAGATAACGAC
CCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCACTGAGGTGGT
TCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGATCGATGGCACC
CGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATATTTCCAGACC
GGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGACAAAGCAGGC
GGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCACTTGCGATTCC
CGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAGTCGA
CTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGATGACAGAAGC
CAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCTCCG
TTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAAGGAGCTAGCA
CCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGGCCGAGCTAGA
GACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCAACGCGGCAGT
ATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATGGCAGGCCCTT
GCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACAGCACTAATGT
CGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGTCTTGTCCGTG
CTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACTGTCAGAACTC
GCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTCGGG
ATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAGACCATGATGG
GCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCATAGGAGAGCT
CTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATCTACGAAAGCG
ACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCGCGG
AGCCAGATGTACAAGCCCCTCCGTCCTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0052381tRNA dimethylallyltransferase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003796KJC3_003796Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003796-T1.utr5p1KJC3_003796-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003796-T1.exon1KJC3_003796-T1.exon1Aspergillus niger KJC3exon
KJC3_003796-T1.exon2KJC3_003796-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003796-T1.cdsKJC3_003796-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003796-T1KJC3_003796-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262C5Z
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030666
DBxrefInterPro:IPR018022
DBxrefPFAM:PF01715
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3069420..3071062 +
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