KJC3_003804-T1, KJC3_003804-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_003804-T1
Unique Name	KJC3_003804-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch3:3085508..3087382-
coding sequence from alignment at ch3:3085508..3087382-

mRNA from alignment at ch3:3085508..3087382-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_003804-T1 ID=KJC3_003804-T1|Name=KJC3_003804-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1875bp|location=Sequence derived from alignment at ch3:3085508..3087382- (Aspergillus niger KJC3)
CCCCTTCAAATTCTACTAGGCTTGTTTCCTGCGGATATCCCCTACTACAG
AGTAGACTGATGGGTTTCCCCAACATTGATGAGGTCAACCCAAGTATAAT
GAATGATTGATTGGCGCCTGCGATGTCATTCAATCGCTTGCATTTACATG
TATGAGGACAGTCGCGATGGCCAATGATTCAAACACCCATCCCCCTGATA
CCATGAAAGATGTCAGCCATGTACAGCATGTCGATTTCGCCTCAGACAGC
AGAACCTCGTCTAAGGAGCGTACAGTCAACTTCTTTCTGCTTCTGACCTG
CGCCGCTTTCGGCTCAGCTTCATTGGTGTTCGGTTTTGATGACAAGATAA
TTTCACCTGTGGCTGCATTGGGGCCATTTGTAAGTGTCAATGAACCCTTG
GTGAGGCAGCGTCATAGGATGGTTCCATTGGGCTAACAGCATGAGCAGGT
CGACAAATATCAAGGACCCGAGCCACTTACAGGGAAACTGGTCTTGACGG
CTCGTAATCAGAGCATATTGTTTTCTGTTCCTCTAATAGGTTCGATTCTG
GGAGGCTTAGCTGCCTCTCCGCTGAATTCGAGGTTGGGCCGGAAGTACCC
CTTGTTGATTGCATATATAATCTCCATCGGCGGCAGCTTGCTTCAGGTAC
TGGCTCCAAACTTGGGTGCGTTCGTTTCTGGTCGATTTATCAACGGAATC
GCTACGGGGATTGCCAATGGCACGGCTCCCTTGTATCTAGCAGAGGTGTG
CATGTCGGTGCTCTAGAGTCTCAAGAAACCTCACTCACCGTTTGGCAGGT
CGTCCCTGCCTCTATGAGAGGAAGAAGTGTATCGTTGATAAATATTCTGA
CCCTAGTAGCGGGTGTCCTGGGCACCATTGTGGTGTTATGCACTCACAGC
TTGACAGGGCCGAGCTCGTACAGGATTCCCTTGACAGTCCAGTGTGTCCT
TCCTGCTTTGCTGCTCATTTGGACCTTGCCTTTGCCCGAGAGCCCGCAAT
GGCTTGTTTCTAGAGGCAGGTTGGAAGCGGCTCGCAGCAACTTGCGAAGA
CTGCGCCGTTGCAGTGAACAGCGAGTCGACGAGGAGCTCCGAGATATGGA
ACTTTCCGAAGGGCACGCTTCTGACGTGAAGGTGTCCTTTTGGGAAATTT
TCTCCAAGAAGCACCTTCAGCGCACCCTGACTGCCGGTTCTTTCTACTCT
CTGAACCAGATTTCAGGCATCATCCTTTCAACGACATACAGCACGGTCTT
CCTGTCCGGGATTGGCATCGGAGACCCATTCACATTAACCGTGATAGCTT
CTTGTTGCACCCTTGCGGGTACAATCGCTGCGCCGTTCATGTTGGACCGG
GCTGGCCGCCGTCCTACCGCATTGACGGGCATGAGTGTCCTCTTCATCAT
CGACCTTGCCGCTGGTGGTCTGGCGTTCAACAAGGGAAACCGCCAATCAG
CCATAGCAATCGCGGCCTTGTCCTTTGCGTTCAATTTCTTCTGGGCGTCC
TCCTTCTCACCATTATCAACGCTGCTGCCCTCGGAGATGGCTACTCCTAA
ACTTCGTCACCACACCATGGCTTACACCATTGCTTGTGCCCAAGCAACCG
CTGTGATCACAACTCTAGTGGTGCCCCAGCTAACAGCGCCTGATGCAGCA
AATCTGGGGCCAAAGACCTATCTTGTATTCGCCGGCTGCATGGCGTGCAT
TCTGGTCTTCGCCTATTTTTTCATCCCAGAGACCAAAGGCCGCAAGTTTG
TGGAAATCGACGCAATGTATGATGCCAATATTCCTGCACGGAAATGGAGG
CAATATTGGTCTTCACTCGAGAAGGCCACTGGCTCTAATTCCCAAGTCTC
CAAAGCCTCCATAGCAGCAAGCTGA

Coding sequence (CDS) from alignment at ch3:3085508..3087382-

>KJC3_003804-T1 ID=KJC3_003804-T1|Name=KJC3_003804-T1|organism=Aspergillus niger KJC3|type=CDS|length=4806bp|location=Sequence derived from alignment at ch3:3085508..3087382- (Aspergillus niger KJC3)
GTCGTCCCTGCCTCTATGAGAGGAAGAAGTGTATCGTTGATAAATATTCT
GACCCTAGTAGCGGGTGTCCTGGGCACCATTGTGGTGTTATGCACTCACA
GCTTGACAGGGCCGAGCTCGTACAGGATTCCCTTGACAGTCCAGTGTGTC
CTTCCTGCTTTGCTGCTCATTTGGACCTTGCCTTTGCCCGAGAGCCCGCA
ATGGCTTGTTTCTAGAGGCAGGTTGGAAGCGGCTCGCAGCAACTTGCGAA
GACTGCGCCGTTGCAGTGAACAGCGAGTCGACGAGGAGCTCCGAGATATG
GAACTTTCCGAAGGGCACGCTTCTGACGTGAAGGTGTCCTTTTGGGAAAT
TTTCTCCAAGAAGCACCTTCAGCGCACCCTGACTGCCGGTTCTTTCTACT
CTCTGAACCAGATTTCAGGCATCATCCTTTCAACGACATACAGCACGGTC
TTCCTGTCCGGGATTGGCATCGGAGACCCATTCACATTAACCGTGATAGC
TTCTTGTTGCACCCTTGCGGGTACAATCGCTGCGCCGTTCATGTTGGACC
GGGCTGGCCGCCGTCCTACCGCATTGACGGGCATGAGTGTCCTCTTCATC
ATCGACCTTGCCGCTGGTGGTCTGGCGTTCAACAAGGGAAACCGCCAATC
AGCCATAGCAATCGCGGCCTTGTCCTTTGCGTTCAATTTCTTCTGGGCGT
CCTCCTTCTCACCATTATCAACGCTGCTGCCCTCGGAGATGGCTACTCCT
AAACTTCGTCACCACACCATGGCTTACACCATTGCTTGTGCCCAAGCAAC
CGCTGTGATCACAACTCTAGTGGTGCCCCAGCTAACAGCGCCTGATGCAG
CAAATCTGGGGCCAAAGACCTATCTTGTATTCGCCGGCTGCATGGCGTGC
ATTCTGGTCTTCGCCTATTTTTTCATCCCAGAGACCAAAGGCCGCAAGTT
TGTGGAAATCGACGCAATGTATGATGCCAATATTCCTGCACGGAAATGGA
GGCAATATTGGTCTTCACTCGAGAAGGCCACTGGCTCTAATTCCCAAGTC
TCCAAAGCCTCCATAGCAGCAAGCTGAGTCGACAAATATCAAGGACCCGA
GCCACTTACAGGGAAACTGGTCTTGACGGCTCGTAATCAGAGCATATTGT
TTTCTGTTCCTCTAATAGGTTCGATTCTGGGAGGCTTAGCTGCCTCTCCG
CTGAATTCGAGGTTGGGCCGGAAGTACCCCTTGTTGATTGCATATATAAT
CTCCATCGGCGGCAGCTTGCTTCAGGTACTGGCTCCAAACTTGGGTGCGT
TCGTTTCTGGTCGATTTATCAACGGAATCGCTACGGGGATTGCCAATGGC
ACGGCTCCCTTGTATCTAGCAGAGATGAGGACAGTCGCGATGGCCAATGA
TTCAAACACCCATCCCCCTGATACCATGAAAGATGTCAGCCATGTACAGC
ATGTCGATTTCGCCTCAGACAGCAGAACCTCGTCTAAGGAGCGTACAGTC
AACTTCTTTCTGCTTCTGACCTGCGCCGCTTTCGGCTCAGCTTCATTGGT
GTTCGGTTTTGATGACAAGATAATTTCACCTGTGGCTGCATTGGGGCCAT
TTGTCGTCCCTGCCTCTATGAGAGGAAGAAGTGTATCGTTGATAAATATT
CTGACCCTAGTAGCGGGTGTCCTGGGCACCATTGTGGTGTTATGCACTCA
CAGCTTGACAGGGCCGAGCTCGTACAGGATTCCCTTGACAGTCCAGTGTG
TCCTTCCTGCTTTGCTGCTCATTTGGACCTTGCCTTTGCCCGAGAGCCCG
CAATGGCTTGTTTCTAGAGGCAGGTTGGAAGCGGCTCGCAGCAACTTGCG
AAGACTGCGCCGTTGCAGTGAACAGCGAGTCGACGAGGAGCTCCGAGATA
TGGAACTTTCCGAAGGGCACGCTTCTGACGTGAAGGTGTCCTTTTGGGAA
ATTTTCTCCAAGAAGCACCTTCAGCGCACCCTGACTGCCGGTTCTTTCTA
CTCTCTGAACCAGATTTCAGGCATCATCCTTTCAACGACATACAGCACGG
TCTTCCTGTCCGGGATTGGCATCGGAGACCCATTCACATTAACCGTGATA
GCTTCTTGTTGCACCCTTGCGGGTACAATCGCTGCGCCGTTCATGTTGGA
CCGGGCTGGCCGCCGTCCTACCGCATTGACGGGCATGAGTGTCCTCTTCA
TCATCGACCTTGCCGCTGGTGGTCTGGCGTTCAACAAGGGAAACCGCCAA
TCAGCCATAGCAATCGCGGCCTTGTCCTTTGCGTTCAATTTCTTCTGGGC
GTCCTCCTTCTCACCATTATCAACGCTGCTGCCCTCGGAGATGGCTACTC
CTAAACTTCGTCACCACACCATGGCTTACACCATTGCTTGTGCCCAAGCA
ACCGCTGTGATCACAACTCTAGTGGTGCCCCAGCTAACAGCGCCTGATGC
AGCAAATCTGGGGCCAAAGACCTATCTTGTATTCGCCGGCTGCATGGCGT
GCATTCTGGTCTTCGCCTATTTTTTCATCCCAGAGACCAAAGGCCGCAAG
TTTGTGGAAATCGACGCAATGTATGATGCCAATATTCCTGCACGGAAATG
GAGGCAATATTGGTCTTCACTCGAGAAGGCCACTGGCTCTAATTCCCAAG
TCTCCAAAGCCTCCATAGCAGCAAGCTGAGTCGACAAATATCAAGGACCC
GAGCCACTTACAGGGAAACTGGTCTTGACGGCTCGTAATCAGAGCATATT
GTTTTCTGTTCCTCTAATAGGTTCGATTCTGGGAGGCTTAGCTGCCTCTC
CGCTGAATTCGAGGTTGGGCCGGAAGTACCCCTTGTTGATTGCATATATA
ATCTCCATCGGCGGCAGCTTGCTTCAGGTACTGGCTCCAAACTTGGGTGC
GTTCGTTTCTGGTCGATTTATCAACGGAATCGCTACGGGGATTGCCAATG
GCACGGCTCCCTTGTATCTAGCAGAGATGAGGACAGTCGCGATGGCCAAT
GATTCAAACACCCATCCCCCTGATACCATGAAAGATGTCAGCCATGTACA
GCATGTCGATTTCGCCTCAGACAGCAGAACCTCGTCTAAGGAGCGTACAG
TCAACTTCTTTCTGCTTCTGACCTGCGCCGCTTTCGGCTCAGCTTCATTG
GTGTTCGGTTTTGATGACAAGATAATTTCACCTGTGGCTGCATTGGGGCC
ATTTGTCGTCCCTGCCTCTATGAGAGGAAGAAGTGTATCGTTGATAAATA
TTCTGACCCTAGTAGCGGGTGTCCTGGGCACCATTGTGGTGTTATGCACT
CACAGCTTGACAGGGCCGAGCTCGTACAGGATTCCCTTGACAGTCCAGTG
TGTCCTTCCTGCTTTGCTGCTCATTTGGACCTTGCCTTTGCCCGAGAGCC
CGCAATGGCTTGTTTCTAGAGGCAGGTTGGAAGCGGCTCGCAGCAACTTG
CGAAGACTGCGCCGTTGCAGTGAACAGCGAGTCGACGAGGAGCTCCGAGA
TATGGAACTTTCCGAAGGGCACGCTTCTGACGTGAAGGTGTCCTTTTGGG
AAATTTTCTCCAAGAAGCACCTTCAGCGCACCCTGACTGCCGGTTCTTTC
TACTCTCTGAACCAGATTTCAGGCATCATCCTTTCAACGACATACAGCAC
GGTCTTCCTGTCCGGGATTGGCATCGGAGACCCATTCACATTAACCGTGA
TAGCTTCTTGTTGCACCCTTGCGGGTACAATCGCTGCGCCGTTCATGTTG
GACCGGGCTGGCCGCCGTCCTACCGCATTGACGGGCATGAGTGTCCTCTT
CATCATCGACCTTGCCGCTGGTGGTCTGGCGTTCAACAAGGGAAACCGCC
AATCAGCCATAGCAATCGCGGCCTTGTCCTTTGCGTTCAATTTCTTCTGG
GCGTCCTCCTTCTCACCATTATCAACGCTGCTGCCCTCGGAGATGGCTAC
TCCTAAACTTCGTCACCACACCATGGCTTACACCATTGCTTGTGCCCAAG
CAACCGCTGTGATCACAACTCTAGTGGTGCCCCAGCTAACAGCGCCTGAT
GCAGCAAATCTGGGGCCAAAGACCTATCTTGTATTCGCCGGCTGCATGGC
GTGCATTCTGGTCTTCGCCTATTTTTTCATCCCAGAGACCAAAGGCCGCA
AGTTTGTGGAAATCGACGCAATGTATGATGCCAATATTCCTGCACGGAAA
TGGAGGCAATATTGGTCTTCACTCGAGAAGGCCACTGGCTCTAATTCCCA
AGTCTCCAAAGCCTCCATAGCAGCAAGCTGAGTCGACAAATATCAAGGAC
CCGAGCCACTTACAGGGAAACTGGTCTTGACGGCTCGTAATCAGAGCATA
TTGTTTTCTGTTCCTCTAATAGGTTCGATTCTGGGAGGCTTAGCTGCCTC
TCCGCTGAATTCGAGGTTGGGCCGGAAGTACCCCTTGTTGATTGCATATA
TAATCTCCATCGGCGGCAGCTTGCTTCAGGTACTGGCTCCAAACTTGGGT
GCGTTCGTTTCTGGTCGATTTATCAACGGAATCGCTACGGGGATTGCCAA
TGGCACGGCTCCCTTGTATCTAGCAGAGATGAGGACAGTCGCGATGGCCA
ATGATTCAAACACCCATCCCCCTGATACCATGAAAGATGTCAGCCATGTA
CAGCATGTCGATTTCGCCTCAGACAGCAGAACCTCGTCTAAGGAGCGTAC
AGTCAACTTCTTTCTGCTTCTGACCTGCGCCGCTTTCGGCTCAGCTTCAT
TGGTGTTCGGTTTTGATGACAAGATAATTTCACCTGTGGCTGCATTGGGG
CCATTT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_003804	KJC3_003804	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_003804-T1	KJC3_003804-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_003804-T1.cds	KJC3_003804-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_003804-T1.exon3	KJC3_003804-T1.exon3	Aspergillus niger KJC3	exon
KJC3_003804-T1.exon2	KJC3_003804-T1.exon2	Aspergillus niger KJC3	exon
KJC3_003804-T1.exon1	KJC3_003804-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_003804-T1.utr5p1	KJC3_003804-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR036259
DBxref	InterPro:IPR020846
DBxref	InterPro:IPR005829
DBxref	InterPro:IPR005828
DBxref	InterPro:IPR003663
DBxref	PFAM:PF00083
DBxref	PFAM:PF07690
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch3	supercontig	ch3:3085508..3087382 -

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KJC3_003804-T1, KJC3_003804-T1 (mRNA) Aspergillus niger KJC3