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KJC3_003838-T2, KJC3_003838-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003838-T2
Unique NameKJC3_003838-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3192007..3194189-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003838-T2 ID=KJC3_003838-T2|Name=KJC3_003838-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2183bp|location=Sequence derived from alignment at ch3:3192007..3194189- (Aspergillus niger KJC3)
TCTTTCATCCCATCTTGTCTTGCGGTCCCAGAAAATGGTGTCGCAACATA
CTGCTGCATTTTTAGAAGCATGAACATTCTTCCAAGGGTGGGTTGCGGGT
CGCTGCAAGATCGATGCGGTAAACACAGGCCCGGATGCGGAAGCTCAGTG
TAGGCCTTAATCCGATAGCATCATAGACTTCCTTAGCCGTTCCTCAGTCG
GGCGAAACCCTTTCTATGAACTGATACGATAGCAGTCTAGATCCGTAGAC
TGTTTGGATGCAGTCGCCAATAAGGAGCTTGATCAAACAATCGCCCTTCT
GCTCTTTGGTCCAACGGAAGACCCATCTTGTTGTATGTAATCCTGACGGT
CTCTACTACGCTGTGACCCCGGCGCGTGCTCCGTTTGCGTGCGAATTTAC
AACCTTTGCGAAGGTTACTTTTTGAAGGTCAAAAGGCCCTCTGTCCCGTC
TTCCTCTTGACAACTCGTTTGTCATGTGGCTTGCTTTCAGTTATATTTCC
CAGGACACCATGATGCCCCGAATCCAGCAGAAAACGGGCTGGTACTCTTT
CTTCTTCTGAGTCCTTGTTACATTTTGACTATAGATCACAGCACATATAC
CTCGATTTCCCTGTTACTTACATACAGACGATACAGTCTGCCACAATCGA
CGAAATGAGGTCAGATCTGCCGGTTGATATGGGATCTAGTTTCCGCCGTG
CTGGGGAACGATTGAGGTCCATCGCAAAGATGAATCGCTGGGCGAAAACC
CAGTATGAAGGGAAAGTCGGCGATACAGACACTATCACCAACTGCTATCT
CCTCGCGCTACCGACCGAGCTGCTCCTAGAAATCATTTCTCACCTGTCGG
TGCTGCCCGAAGCATGTCTGGCGCTGACCTGTAAACGCCTCTACTCGATA
TGCGGTGCTACCCTGGGTGCCAAACCCCTCCATTTCAGTCGAGACTTCGC
ACCACTTTTCCACCACTATCGCAATGGACACAATTTCGTCACCCCACGCT
GGCAATTCATAAACTTGCTGGAAGATAACAGGTGGCGGGCATGTTCTCGA
TGCTTGAAGCTCCATCCGAGGAGCTTCTTTCCCGCACGAGAGCTGAAACG
AAAGTCCGAGGATAGGTCATGCAACCTAGGGAGTTCGGCAGGCATAGTAG
ACCTATGTCCTTGCAAGAAACTGACTTTCCAGGATAAGATGGAACTTGTT
GAACTTTTGAGAGTACGAAGGAAAACCATAACGGACCTGGCGGTCCAATT
TGGATCCGGGATGAAACAGCAGCGTTTCTGCTGGCATAGTTGCACTGAGG
ACTACGGATCAACACAGCTGGATATTGAGATCTATCCTGAGCTGGACGAC
GAAGACCAGTTGAAGATTAAGACAGAGTACCGCTTGCGCACGGGTTCCGG
CCAGCTCGGCAAGGAAGAGCACATGACGCCGCGCTTTGGTTGTGCTCACC
GGTCGGTTGACTTATGGCTTTCGAGTGTATGCCAGACCACTCTCTGTCGC
CTTTATGACAACCACTGCGCATCCTGCAAGCGAATATCCGTATGTAATAC
GTGCAATGCCTCACTCAGGTGTCCTCGCAAACAACCATGTCGAGTCGACG
AGGAAACGGGACAAGCAACATACCACTTTTATACTGAAAGGTGCCTTGGT
GGACCGGGGCCTGTCCCAGATCAGACATGGGCCGCGCAACGAATCCATCC
TGCGGAGAATTTAATCGATGTCGCAAATTGCAGTGAGCTATGCCCGTGGA
CGATCCGAGAACATCCACCTCTGGAAGAAGCACCGTCTTTGGATATGAAT
ATCCTCAACCCCGCTATACAGGATCAGTCGATGAATCAGCTGTATACCTC
GATCAGTATGATTTAGGGTTGATTGGTGTGGTCACGAATCTCATGTGTGT
GATGTATTCTAGACGGATCTGGTTTCGGCGTTATGCAAGGACTTTCGAGT
TGAATAGTTTGGGTTGGAAGGGTGTATTATCATTGTTTCCATCGTGATGT
CGGCTTGTTTGCTAGATGGAAGATGTTCGGGATATAGTATAATTAGCTAG
AGAGAGGGTTTTACGGCAAGACCCGGTCCAATGCACATGATATAATGCTC
CGTATGCAGCTTCGAAAGAATCCATATTCTAGACTTCTAGACGATGCGGG
TTGTTCCGTCGAAGAACAGGGAGCTTCTCCCTA
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Coding sequence (CDS) from alignment at ch3:3192007..3194189-

>KJC3_003838-T2 ID=KJC3_003838-T2|Name=KJC3_003838-T2|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch3:3192007..3194189- (Aspergillus niger KJC3)
ATGAGGTCAGATCTGCCGGTTGATATGGGATCTAGTTTCCGCCGTGCTGG
GGAACGATTGAGGTCCATCGCAAAGATGAATCGCTGGGCGAAAACCCAGT
ATGAAGGGAAAGTCGGCGATACAGACACTATCACCAACTGCTATCTCCTC
GCGCTACCGACCGAGCTGCTCCTAGAAATCATTTCTCACCTGTCGGTGCT
GCCCGAAGCATGTCTGGCGCTGACCTGTAAACGCCTCTACTCGATATGCG
GTGCTACCCTGGGTGCCAAACCCCTCCATTTCAGTCGAGACTTCGCACCA
CTTTTCCACCACTATCGCAATGGACACAATTTCGTCACCCCACGCTGGCA
ATTCATAAACTTGCTGGAAGATAACAGGTGGCGGGCATGTTCTCGATGCT
TGAAGCTCCATCCGAGGAGCTTCTTTCCCGCACGAGAGCTGAAACGAAAG
TCCGAGGATAGGTCATGCAACCTAGGGAGTTCGGCAGGCATAGTAGACCT
ATGTCCTTGCAAGAAACTGACTTTCCAGGATAAGATGGAACTTGTTGAAC
TTTTGAGAGTACGAAGGAAAACCATAACGGACCTGGCGGTCCAATTTGGA
TCCGGGATGAAACAGCAGCGTTTCTGCTGGCATAGTTGCACTGAGGACTA
CGGATCAACACAGCTGGATATTGAGATCTATCCTGAGCTGGACGACGAAG
ACCAGTTGAAGATTAAGACAGAGTACCGCTTGCGCACGGGTTCCGGCCAG
CTCGGCAAGGAAGAGCACATGACGCCGCGCTTTGGTTGTGCTCACCGGTC
GGTTGACTTATGGCTTTCGAGTGTATGCCAGACCACTCTCTGTCGCCTTT
ATGACAACCACTGCGCATCCTGCAAGCGAATATCCGTATGTAATACGTGC
AATGCCTCACTCAGGTGTCCTCGCAAACAACCATGTCGAGTCGACGAGGA
AACGGGACAAGCAACATACCACTTTTATACTGAAAGGTGCCTTGGTGGAC
CGGGGCCTGTCCCAGATCAGACATGGGCCGCGCAACGAATCCATCCTGCG
GAGAATTTAATCGATGTCGCAAATTGCAGTGAGCTATGCCCGTGGACGAT
CCGAGAACATCCACCTCTGGAAGAAGCACCGTCTTTGGATATGAATATCC
TCAACCCCGCTATACAGGATCAGTCGATGAATCAGCTGTATACCTCGATC
AGTATGATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003838KJC3_003838Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003838-T2KJC3_003838-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003838-T2.cdsKJC3_003838-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003838-T2.utr3p1KJC3_003838-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003838-T2.exon3KJC3_003838-T2.exon3Aspergillus niger KJC3exon
KJC3_003838-T2.exon2KJC3_003838-T2.exon2Aspergillus niger KJC3exon
KJC3_003838-T2.exon1KJC3_003838-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003838-T2.utr5p3KJC3_003838-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_003838-T2.utr5p2KJC3_003838-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003838-T2.utr5p1KJC3_003838-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3192007..3194189 -
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