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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3194402..3196238+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003839-T1 ID=KJC3_003839-T1|Name=KJC3_003839-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1837bp|location=Sequence derived from alignment at ch3:3194402..3196238+ (Aspergillus niger KJC3) GTCGCAGTGGTTCCCCGTTTCCCCTTTTTAGAGCTGCAGGTGATTATAGC
GTGCTAGTGCTTGTTCTATAGACTCTTCTTTTGGCGTTGCATTACAACCA
GATCCGATCCTCCATGTCATTTGTTGACACCCCCATCAGCCTCCTAAGCA
CATTCTCCATACCGCTTCTTGTGGCGGGCCTGCTGGGAATGGGCCTGCTC
TCATGGATCCGCCCTAATGGCCGGATCGCATACTATCATGCGAAAGATAA
TAATCTTCTACTGACCACAAAGGCTGAGAAGTCAAGATCCCAGACGCAAG
TGACTCTGGCAGACCTCTGTCGCACTGCCACTCCGAAGACGTGCCAGCTG
AACCCCTTCCTTTTCAACGGCCATCTACAGACTGCCTGGACAAGCGTGAA
ATTTGATAATGTCCCGGTGCACTACAAGCGCTGGATGTTCGAGGCTGAGA
ATCCGATGTTGTCTGGGCACTTTGCGATGGACTTTGTGGTAGATCCATAT
GAGCCGCCTAGCGACGCTCATGCGACTGATAGCGAGAGAAAATATACTCA
GCCATCGGGGCTACCGGAGCGGACGTCATTCTTCTCAGAGGATGAATTTG
CTGCGCTTCCCTCGGACGATAACAAACCGATGCTCGTGGTTCTCCATGGC
CTAAGCGGTGGATCACATGAACTTTATCTGCGCCATGTGATTGCGCCTCT
TATCAAGGATCAGACATGGGAAGCTTGTGTCGTCAACTCCAGAGGCTGCT
CGCAAACCAAGATTACCACCGGTGTGCTTTACAATGCTCGTGCTACCTGG
GACATTCGTCAGGCTGTCAAATGGCTACGGAAGACTTTTCCGAATCGTCC
CTTGTTTGGAATTGGTTTCTCCCTCGGCGCGAACATTCTGGCTAATGTAA
GTCTATGTTAGGCACAAGCAACCAAGATTGACTGACGTGATCGTAGTACT
TGGGCGAGGAGGGCGATGCCTGCGAGTTGAAAGCTGCAGTGCTCTGTGCT
AGCCCTTGGAACCTTGAAATTGGCTCTCTAAACCTGCAAAACACCTTGAT
CGGTCGCGAAGTCTACAGTAAAGTAATGGGCACGAGCATGAAGGACCTGT
TCGAACGGTAAGTGAAATATTACTGACATTGGCATTGCCACATCTGACTC
GAGACCATCAGACATGTGGAACAGGTCTCCAAGAACCCGCGAATCGACGT
TGATGAGGTGAGGAACATCACTTACTTGCATGAATTCGACCGGTAAGACA
TGACTGCCAGCTTTTCTACAACTGCACATTTTTAACATTAGCCACAAATA
GGGCTTTACAATGTGCCTCGTGGGGCTATCCCACTGAAGGAGCATACTAT
CGCGATGCTTCCTCCACCGATGCTATGCTTGGTATTCGAATTCCATTCTT
CGTTATACAAGCCGAAGACGATCCGGTAAGTGCAGGTTTTAGCAGTCGAA
TTATATACACTAACCGGCAGCAGATTGCCTGTGCCGCTGCACTGCCATTC
CAGGAGATGACACAAACCCCGTACGGCGTGATGATGACTACCTCTTGGGG
TGGGCATCTTGGCTGGTTTGAGCTTGGAGGTGGTAGATGGTTTGTGAAGC
CGGTATGTGAAAGCCACCTACCACTTGTCTATCTACATCTAACTGTTTCA
GGTCGCAAATTTCCTAAACCTCATGGCGAAGGAGGTCGATCTTAGCGTAC
CATTCAAGGTTGAGGATCCGGAGAAGATCCCCGGTCATCTTGCCCACCAT
ACGGGTCCCGAAAAGGACGCAGATACGGCACCGAAGCCGAAATTTATTCC
TGCGCAACGCAAGCTCGACCTGCAAATCAGGCCATAG back to topCoding sequence (CDS) from alignment at ch3:3194402..3196238+ >KJC3_003839-T1 ID=KJC3_003839-T1|Name=KJC3_003839-T1|organism=Aspergillus niger KJC3|type=CDS|length=8784bp|location=Sequence derived from alignment at ch3:3194402..3196238+ (Aspergillus niger KJC3) ATGTCATTTGTTGACACCCCCATCAGCCTCCTAAGCACATTCTCCATACC GCTTCTTGTGGCGGGCCTGCTGGGAATGGGCCTGCTCTCATGGATCCGCC CTAATGGCCGGATCGCATACTATCATGCGAAAGATAATAATCTTCTACTG ACCACAAAGGCTGAGAAGTCAAGATCCCAGACGCAAGTGACTCTGGCAGA CCTCTGTCGCACTGCCACTCCGAAGACGTGCCAGCTGAACCCCTTCCTTT TCAACGGCCATCTACAGACTGCCTGGACAAGCGTGAAATTTGATAATGTC CCGGTGCACTACAAGCGCTGGATGTTCGAGGCTGAGAATCCGATGTTGTC TGGGCACTTTGCGATGGACTTTGTGGTAGATCCATATGAGCCGCCTAGCG ACGCTCATGCGACTGATAGCGAGAGAAAATATACTCAGCCATCGGGGCTA CCGGAGCGGACGTCATTCTTCTCAGAGGATGAATTTGCTGCGCTTCCCTC GGACGATAACAAACCGATGCTCGTGGTTCTCCATGGCCTAAGCGGTGGAT CACATGAACTTTATCTGCGCCATGTGATTGCGCCTCTTATCAAGGATCAG ACATGGGAAGCTTGTGTCGTCAACTCCAGAGGCTGCTCGCAAACCAAGAT TACCACCGGTGTGCTTTACAATGCTCGTGCTACCTGGGACATTCGTCAGG CTGTCAAATGGCTACGGAAGACTTTTCCGAATCGTCCCTTGTTTGGAATT GGTTTCTCCCTCGGCGCGAACATTCTGGCTAATTACTTGGGCGAGGAGGG CGATGCCTGCGAGTTGAAAGCTGCAGTGCTCTGTGCTAGCCCTTGGAACC TTGAAATTGGCTCTCTAAACCTGCAAAACACCTTGATCGGTCGCGAAGTC TACAGTAAAGTAATGGGCACGAGCATGAAGGACCTGTTCGAACGACATGT GGAACAGGTCTCCAAGAACCCGCGAATCGACGTTGATGAGGTGAGGAACA TCACTTACTTGCATGAATTCGACCGGGCTTTACAATGTGCCTCGTGGGGC TATCCCACTGAAGGAGCATACTATCGCGATGCTTCCTCCACCGATGCTAT GCTTGGTATTCGAATTCCATTCTTCGTTATACAAGCCGAAGACGATCCGA TTGCCTGTGCCGCTGCACTGCCATTCCAGGAGATGACACAAACCCCGTAC GGCGTGATGATGACTACCTCTTGGGGTGGGCATCTTGGCTGGTTTGAGCT TGGAGGTGGTAGATGGTTTGTGAAGCCGGTCGCAAATTTCCTAAACCTCA TGGCGAAGGAGGTCGATCTTAGCGTACCATTCAAGGTTGAGGATCCGGAG AAGATCCCCGGTCATCTTGCCCACCATACGGGTCCCGAAAAGGACGCAGA TACGGCACCGAAGCCGAAATTTATTCCTGCGCAACGCAAGCTCGACCTGC AAATCAGGCCATAGATGTCATTTGTTGACACCCCCATCAGCCTCCTAAGC ACATTCTCCATACCGCTTCTTGTGGCGGGCCTGCTGGGAATGGGCCTGCT CTCATGGATCCGCCCTAATGGCCGGATCGCATACTATCATGCGAAAGATA ATAATCTTCTACTGACCACAAAGGCTGAGAAGTCAAGATCCCAGACGCAA GTGACTCTGGCAGACCTCTGTCGCACTGCCACTCCGAAGACGTGCCAGCT GAACCCCTTCCTTTTCAACGGCCATCTACAGACTGCCTGGACAAGCGTGA AATTTGATAATGTCCCGGTGCACTACAAGCGCTGGATGTTCGAGGCTGAG AATCCGATGTTGTCTGGGCACTTTGCGATGGACTTTGTGGTAGATCCATA TGAGCCGCCTAGCGACGCTCATGCGACTGATAGCGAGAGAAAATATACTC AGCCATCGGGGCTACCGGAGCGGACGTCATTCTTCTCAGAGGATGAATTT GCTGCGCTTCCCTCGGACGATAACAAACCGATGCTCGTGGTTCTCCATGG CCTAAGCGGTGGATCACATGAACTTTATCTGCGCCATGTGATTGCGCCTC TTATCAAGGATCAGACATGGGAAGCTTGTGTCGTCAACTCCAGAGGCTGC TCGCAAACCAAGATTACCACCGGTGTGCTTTACAATGCTCGTGCTACCTG GGACATTCGTCAGGCTGTCAAATGGCTACGGAAGACTTTTCCGAATCGTC CCTTGTTTGGAATTGGTTTCTCCCTCGGCGCGAACATTCTGGCTAATTAC TTGGGCGAGGAGGGCGATGCCTGCGAGTTGAAAGCTGCAGTGCTCTGTGC TAGCCCTTGGAACCTTGAAATTGGCTCTCTAAACCTGCAAAACACCTTGA TCGGTCGCGAAGTCTACAGTAAAGTAATGGGCACGAGCATGAAGGACCTG TTCGAACGACATGTGGAACAGGTCTCCAAGAACCCGCGAATCGACGTTGA TGAGGTGAGGAACATCACTTACTTGCATGAATTCGACCGGGCTTTACAAT GTGCCTCGTGGGGCTATCCCACTGAAGGAGCATACTATCGCGATGCTTCC TCCACCGATGCTATGCTTGGTATTCGAATTCCATTCTTCGTTATACAAGC CGAAGACGATCCGATTGCCTGTGCCGCTGCACTGCCATTCCAGGAGATGA CACAAACCCCGTACGGCGTGATGATGACTACCTCTTGGGGTGGGCATCTT GGCTGGTTTGAGCTTGGAGGTGGTAGATGGTTTGTGAAGCCGGTCGCAAA TTTCCTAAACCTCATGGCGAAGGAGGTCGATCTTAGCGTACCATTCAAGG TTGAGGATCCGGAGAAGATCCCCGGTCATCTTGCCCACCATACGGGTCCC GAAAAGGACGCAGATACGGCACCGAAGCCGAAATTTATTCCTGCGCAACG CAAGCTCGACCTGCAAATCAGGCCATAGATGTCATTTGTTGACACCCCCA TCAGCCTCCTAAGCACATTCTCCATACCGCTTCTTGTGGCGGGCCTGCTG GGAATGGGCCTGCTCTCATGGATCCGCCCTAATGGCCGGATCGCATACTA TCATGCGAAAGATAATAATCTTCTACTGACCACAAAGGCTGAGAAGTCAA GATCCCAGACGCAAGTGACTCTGGCAGACCTCTGTCGCACTGCCACTCCG AAGACGTGCCAGCTGAACCCCTTCCTTTTCAACGGCCATCTACAGACTGC CTGGACAAGCGTGAAATTTGATAATGTCCCGGTGCACTACAAGCGCTGGA TGTTCGAGGCTGAGAATCCGATGTTGTCTGGGCACTTTGCGATGGACTTT GTGGTAGATCCATATGAGCCGCCTAGCGACGCTCATGCGACTGATAGCGA GAGAAAATATACTCAGCCATCGGGGCTACCGGAGCGGACGTCATTCTTCT CAGAGGATGAATTTGCTGCGCTTCCCTCGGACGATAACAAACCGATGCTC GTGGTTCTCCATGGCCTAAGCGGTGGATCACATGAACTTTATCTGCGCCA TGTGATTGCGCCTCTTATCAAGGATCAGACATGGGAAGCTTGTGTCGTCA ACTCCAGAGGCTGCTCGCAAACCAAGATTACCACCGGTGTGCTTTACAAT GCTCGTGCTACCTGGGACATTCGTCAGGCTGTCAAATGGCTACGGAAGAC TTTTCCGAATCGTCCCTTGTTTGGAATTGGTTTCTCCCTCGGCGCGAACA TTCTGGCTAATTACTTGGGCGAGGAGGGCGATGCCTGCGAGTTGAAAGCT GCAGTGCTCTGTGCTAGCCCTTGGAACCTTGAAATTGGCTCTCTAAACCT GCAAAACACCTTGATCGGTCGCGAAGTCTACAGTAAAGTAATGGGCACGA GCATGAAGGACCTGTTCGAACGACATGTGGAACAGGTCTCCAAGAACCCG CGAATCGACGTTGATGAGGTGAGGAACATCACTTACTTGCATGAATTCGA CCGGGCTTTACAATGTGCCTCGTGGGGCTATCCCACTGAAGGAGCATACT ATCGCGATGCTTCCTCCACCGATGCTATGCTTGGTATTCGAATTCCATTC TTCGTTATACAAGCCGAAGACGATCCGATTGCCTGTGCCGCTGCACTGCC ATTCCAGGAGATGACACAAACCCCGTACGGCGTGATGATGACTACCTCTT GGGGTGGGCATCTTGGCTGGTTTGAGCTTGGAGGTGGTAGATGGTTTGTG AAGCCGGTCGCAAATTTCCTAAACCTCATGGCGAAGGAGGTCGATCTTAG CGTACCATTCAAGGTTGAGGATCCGGAGAAGATCCCCGGTCATCTTGCCC ACCATACGGGTCCCGAAAAGGACGCAGATACGGCACCGAAGCCGAAATTT ATTCCTGCGCAACGCAAGCTCGACCTGCAAATCAGGCCATAGATGTCATT TGTTGACACCCCCATCAGCCTCCTAAGCACATTCTCCATACCGCTTCTTG TGGCGGGCCTGCTGGGAATGGGCCTGCTCTCATGGATCCGCCCTAATGGC CGGATCGCATACTATCATGCGAAAGATAATAATCTTCTACTGACCACAAA GGCTGAGAAGTCAAGATCCCAGACGCAAGTGACTCTGGCAGACCTCTGTC GCACTGCCACTCCGAAGACGTGCCAGCTGAACCCCTTCCTTTTCAACGGC CATCTACAGACTGCCTGGACAAGCGTGAAATTTGATAATGTCCCGGTGCA CTACAAGCGCTGGATGTTCGAGGCTGAGAATCCGATGTTGTCTGGGCACT TTGCGATGGACTTTGTGGTAGATCCATATGAGCCGCCTAGCGACGCTCAT GCGACTGATAGCGAGAGAAAATATACTCAGCCATCGGGGCTACCGGAGCG GACGTCATTCTTCTCAGAGGATGAATTTGCTGCGCTTCCCTCGGACGATA ACAAACCGATGCTCGTGGTTCTCCATGGCCTAAGCGGTGGATCACATGAA CTTTATCTGCGCCATGTGATTGCGCCTCTTATCAAGGATCAGACATGGGA AGCTTGTGTCGTCAACTCCAGAGGCTGCTCGCAAACCAAGATTACCACCG GTGTGCTTTACAATGCTCGTGCTACCTGGGACATTCGTCAGGCTGTCAAA TGGCTACGGAAGACTTTTCCGAATCGTCCCTTGTTTGGAATTGGTTTCTC CCTCGGCGCGAACATTCTGGCTAATTACTTGGGCGAGGAGGGCGATGCCT GCGAGTTGAAAGCTGCAGTGCTCTGTGCTAGCCCTTGGAACCTTGAAATT GGCTCTCTAAACCTGCAAAACACCTTGATCGGTCGCGAAGTCTACAGTAA AGTAATGGGCACGAGCATGAAGGACCTGTTCGAACGACATGTGGAACAGG TCTCCAAGAACCCGCGAATCGACGTTGATGAGGTGAGGAACATCACTTAC TTGCATGAATTCGACCGGGCTTTACAATGTGCCTCGTGGGGCTATCCCAC TGAAGGAGCATACTATCGCGATGCTTCCTCCACCGATGCTATGCTTGGTA TTCGAATTCCATTCTTCGTTATACAAGCCGAAGACGATCCGATTGCCTGT GCCGCTGCACTGCCATTCCAGGAGATGACACAAACCCCGTACGGCGTGAT GATGACTACCTCTTGGGGTGGGCATCTTGGCTGGTTTGAGCTTGGAGGTG GTAGATGGTTTGTGAAGCCGGTCGCAAATTTCCTAAACCTCATGGCGAAG GAGGTCGATCTTAGCGTACCATTCAAGGTTGAGGATCCGGAGAAGATCCC CGGTCATCTTGCCCACCATACGGGTCCCGAAAAGGACGCAGATACGGCAC CGAAGCCGAAATTTATTCCTGCGCAACGCAAGCTCGACCTGCAAATCAGG CCATAGATGTCATTTGTTGACACCCCCATCAGCCTCCTAAGCACATTCTC CATACCGCTTCTTGTGGCGGGCCTGCTGGGAATGGGCCTGCTCTCATGGA TCCGCCCTAATGGCCGGATCGCATACTATCATGCGAAAGATAATAATCTT CTACTGACCACAAAGGCTGAGAAGTCAAGATCCCAGACGCAAGTGACTCT GGCAGACCTCTGTCGCACTGCCACTCCGAAGACGTGCCAGCTGAACCCCT TCCTTTTCAACGGCCATCTACAGACTGCCTGGACAAGCGTGAAATTTGAT AATGTCCCGGTGCACTACAAGCGCTGGATGTTCGAGGCTGAGAATCCGAT GTTGTCTGGGCACTTTGCGATGGACTTTGTGGTAGATCCATATGAGCCGC CTAGCGACGCTCATGCGACTGATAGCGAGAGAAAATATACTCAGCCATCG GGGCTACCGGAGCGGACGTCATTCTTCTCAGAGGATGAATTTGCTGCGCT TCCCTCGGACGATAACAAACCGATGCTCGTGGTTCTCCATGGCCTAAGCG GTGGATCACATGAACTTTATCTGCGCCATGTGATTGCGCCTCTTATCAAG GATCAGACATGGGAAGCTTGTGTCGTCAACTCCAGAGGCTGCTCGCAAAC CAAGATTACCACCGGTGTGCTTTACAATGCTCGTGCTACCTGGGACATTC GTCAGGCTGTCAAATGGCTACGGAAGACTTTTCCGAATCGTCCCTTGTTT GGAATTGGTTTCTCCCTCGGCGCGAACATTCTGGCTAATTACTTGGGCGA GGAGGGCGATGCCTGCGAGTTGAAAGCTGCAGTGCTCTGTGCTAGCCCTT GGAACCTTGAAATTGGCTCTCTAAACCTGCAAAACACCTTGATCGGTCGC GAAGTCTACAGTAAAGTAATGGGCACGAGCATGAAGGACCTGTTCGAACG ACATGTGGAACAGGTCTCCAAGAACCCGCGAATCGACGTTGATGAGGTGA GGAACATCACTTACTTGCATGAATTCGACCGGGCTTTACAATGTGCCTCG TGGGGCTATCCCACTGAAGGAGCATACTATCGCGATGCTTCCTCCACCGA TGCTATGCTTGGTATTCGAATTCCATTCTTCGTTATACAAGCCGAAGACG ATCCGATTGCCTGTGCCGCTGCACTGCCATTCCAGGAGATGACACAAACC CCGTACGGCGTGATGATGACTACCTCTTGGGGTGGGCATCTTGGCTGGTT TGAGCTTGGAGGTGGTAGATGGTTTGTGAAGCCGGTCGCAAATTTCCTAA ACCTCATGGCGAAGGAGGTCGATCTTAGCGTACCATTCAAGGTTGAGGAT CCGGAGAAGATCCCCGGTCATCTTGCCCACCATACGGGTCCCGAAAAGGA CGCAGATACGGCACCGAAGCCGAAATTTATTCCTGCGCAACGCAAGCTCG ACCTGCAAATCAGGCCATAGATGTCATTTGTTGACACCCCCATCAGCCTC CTAAGCACATTCTCCATACCGCTTCTTGTGGCGGGCCTGCTGGGAATGGG CCTGCTCTCATGGATCCGCCCTAATGGCCGGATCGCATACTATCATGCGA AAGATAATAATCTTCTACTGACCACAAAGGCTGAGAAGTCAAGATCCCAG ACGCAAGTGACTCTGGCAGACCTCTGTCGCACTGCCACTCCGAAGACGTG CCAGCTGAACCCCTTCCTTTTCAACGGCCATCTACAGACTGCCTGGACAA GCGTGAAATTTGATAATGTCCCGGTGCACTACAAGCGCTGGATGTTCGAG GCTGAGAATCCGATGTTGTCTGGGCACTTTGCGATGGACTTTGTGGTAGA TCCATATGAGCCGCCTAGCGACGCTCATGCGACTGATAGCGAGAGAAAAT ATACTCAGCCATCGGGGCTACCGGAGCGGACGTCATTCTTCTCAGAGGAT GAATTTGCTGCGCTTCCCTCGGACGATAACAAACCGATGCTCGTGGTTCT CCATGGCCTAAGCGGTGGATCACATGAACTTTATCTGCGCCATGTGATTG CGCCTCTTATCAAGGATCAGACATGGGAAGCTTGTGTCGTCAACTCCAGA GGCTGCTCGCAAACCAAGATTACCACCGGTGTGCTTTACAATGCTCGTGC TACCTGGGACATTCGTCAGGCTGTCAAATGGCTACGGAAGACTTTTCCGA ATCGTCCCTTGTTTGGAATTGGTTTCTCCCTCGGCGCGAACATTCTGGCT AATTACTTGGGCGAGGAGGGCGATGCCTGCGAGTTGAAAGCTGCAGTGCT CTGTGCTAGCCCTTGGAACCTTGAAATTGGCTCTCTAAACCTGCAAAACA CCTTGATCGGTCGCGAAGTCTACAGTAAAGTAATGGGCACGAGCATGAAG GACCTGTTCGAACGACATGTGGAACAGGTCTCCAAGAACCCGCGAATCGA CGTTGATGAGGTGAGGAACATCACTTACTTGCATGAATTCGACCGGGCTT TACAATGTGCCTCGTGGGGCTATCCCACTGAAGGAGCATACTATCGCGAT GCTTCCTCCACCGATGCTATGCTTGGTATTCGAATTCCATTCTTCGTTAT ACAAGCCGAAGACGATCCGATTGCCTGTGCCGCTGCACTGCCATTCCAGG AGATGACACAAACCCCGTACGGCGTGATGATGACTACCTCTTGGGGTGGG CATCTTGGCTGGTTTGAGCTTGGAGGTGGTAGATGGTTTGTGAAGCCGGT CGCAAATTTCCTAAACCTCATGGCGAAGGAGGTCGATCTTAGCGTACCAT TCAAGGTTGAGGATCCGGAGAAGATCCCCGGTCATCTTGCCCACCATACG GGTCCCGAAAAGGACGCAGATACGGCACCGAAGCCGAAATTTATTCCTGC GCAACGCAAGCTCGACCTGCAAATCAGGCCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_003839-T1.utr5p1 | KJC3_003839-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | MEROPS:MER0059846 |
DBxref | InterPro:IPR000073 |
DBxref | InterPro:IPR029058 |
DBxref | PFAM:PF12146 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:3194402..3196238 + |
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