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KJC3_003841-T1, KJC3_003841-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003841-T1
Unique NameKJC3_003841-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3197480..3198575+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003841-T1 ID=KJC3_003841-T1|Name=KJC3_003841-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1096bp|location=Sequence derived from alignment at ch3:3197480..3198575+ (Aspergillus niger KJC3)
ATCGACTTCCCTTCCTTTTCCCCATTCGCTCTCCTCCCCCACCGCGGTCT
TTCTCTCCCCTCTCATCTCAAGTGTGCCATTGTCGAGCCTCACCACCGGG
CCACTATTCAAGATGACCATCAACCCGACCTTCCTTGCCCAGCGCACGCG
CTCCTGTACGTTTTCCCTTCCTCCCAGGACTCGGTTGTCCCGACCAAGTC
CGACCTTTAGAAATTGCCGCGACGTCAATGGCCGGAATCCCGAGCTGACC
TTTCTCGCCCTGTGTAGCTGCCAACTGGGGTGATGCGAAGCACCGTGTCC
TCAAGTCCTACAGAGAATGGCTTAGAGCGGTCAGTGATCCTTATACTCGA
TGATTTACCTATGCATCATCACCCAATGCCCGTTCATCAATGGCTTGCTG
GGGCCTGGCGTTCCCGGCGTGGTCGTCGACCCTTTCGCGTCTACCAGACA
GAACCTGCGACGGACCAGAACCCAACTTTCGATATCTAGCATTCTACGAG
AAACATTCAGACTAACATGGTCCCTCCAATTGAGATGATATAGTCCCCCG
AGATTCAGACTATGTACTCTCTGAACCTCCCCGTCTCCGCTATCCGTACG
AAGATCCGCCAGGAATTCGAGAAGCACCGCTACGTCAACCAGCTGAACGT
TGTTGATGTGCTGTTGTACCAGAGCCACGCTGAGTTCCAGGTGAGTTTAT
GAAAAGTGGGCAGTGTAGCGATACACAATTGCTACCATTGATGCCGCCCA
GCCCAACCAATTGAGTCTCATATGGCATGGATAATGTGTCCTGACCAACA
TCACCAGGAAACCCTCAACTACTGGAAGCAGCTGTCGCATGTGATGAAGT
ACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCATC
TCGGGCTTCTTGGAAGGCCGCAATTGAAATTGTGAAATTATTATCACCAT
CATCTCTTACCACCTCTTTTTATATTTCCCGGTATCCTTAGCATTGAAAG
TTCTCTGACGGCTGCGAACGCTGATAGAGTGTGTGAGTGTTATGTAAATA
TTGTCTGACTACATGATGTTTTGGTTGTTGAATTACTTCAAGGGTG
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Coding sequence (CDS) from alignment at ch3:3197480..3198575+

>KJC3_003841-T1 ID=KJC3_003841-T1|Name=KJC3_003841-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch3:3197480..3198575+ (Aspergillus niger KJC3)
ATGACCATCAACCCGACCTTCCTTGCCCAGCGCACGCGCTCCTCTGCCAA
CTGGGGTGATGCGAAGCACCGTGTCCTCAAGTCCTACAGAGAATGGCTTA
GAGCGTCCCCCGAGATTCAGACTATGTACTCTCTGAACCTCCCCGTCTCC
GCTATCCGTACGAAGATCCGCCAGGAATTCGAGAAGCACCGCTACGTCAA
CCAGCTGAACGTTGTTGATGTGCTGTTGTACCAGAGCCACGCTGAGTTCC
AGGAAACCCTCAACTACTGGAAGCAGCTGTCGCATGTGATGAAGTACTTC
CGTCCAGAGGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCATCTCGGG
CTTCTTGGAAGGCCGCAATTGAATGACCATCAACCCGACCTTCCTTGCCC
AGCGCACGCGCTCCTCTGCCAACTGGGGTGATGCGAAGCACCGTGTCCTC
AAGTCCTACAGAGAATGGCTTAGAGCGTCCCCCGAGATTCAGACTATGTA
CTCTCTGAACCTCCCCGTCTCCGCTATCCGTACGAAGATCCGCCAGGAAT
TCGAGAAGCACCGCTACGTCAACCAGCTGAACGTTGTTGATGTGCTGTTG
TACCAGAGCCACGCTGAGTTCCAGGAAACCCTCAACTACTGGAAGCAGCT
GTCGCATGTGATGAAGTACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGC
TACCTCCCAACTTCATCTCGGGCTTCTTGGAAGGCCGCAATTGAATGACC
ATCAACCCGACCTTCCTTGCCCAGCGCACGCGCTCCTCTGCCAACTGGGG
TGATGCGAAGCACCGTGTCCTCAAGTCCTACAGAGAATGGCTTAGAGCGT
CCCCCGAGATTCAGACTATGTACTCTCTGAACCTCCCCGTCTCCGCTATC
CGTACGAAGATCCGCCAGGAATTCGAGAAGCACCGCTACGTCAACCAGCT
GAACGTTGTTGATGTGCTGTTGTACCAGAGCCACGCTGAGTTCCAGGAAA
CCCTCAACTACTGGAAGCAGCTGTCGCATGTGATGAAGTACTTCCGTCCA
GAGGAGGACCCCGGTGCTCGGCTACCTCCCAACTTCATCTCGGGCTTCTT
GGAAGGCCGCAATTGAATGACCATCAACCCGACCTTCCTTGCCCAGCGCA
CGCGCTCCTCTGCCAACTGGGGTGATGCGAAGCACCGTGTCCTCAAGTCC
TACAGAGAATGGCTTAGAGCGTCCCCCGAGATTCAGACTATGTACTCTCT
GAACCTCCCCGTCTCCGCTATCCGTACGAAGATCCGCCAGGAATTCGAGA
AGCACCGCTACGTCAACCAGCTGAACGTTGTTGATGTGCTGTTGTACCAG
AGCCACGCTGAGTTCCAGGAAACCCTCAACTACTGGAAGCAGCTGTCGCA
TGTGATGAAGTACTTCCGTCCAGAGGAGGACCCCGGTGCTCGGCTACCTC
CCAACTTCATCTCGGGCTTCTTGGAAGGCCGCAATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003841KJC3_003841Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003841-T1KJC3_003841-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003841-T1.utr5p1KJC3_003841-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003841-T1.exon1KJC3_003841-T1.exon1Aspergillus niger KJC3exon
KJC3_003841-T1.exon2KJC3_003841-T1.exon2Aspergillus niger KJC3exon
KJC3_003841-T1.exon3KJC3_003841-T1.exon3Aspergillus niger KJC3exon
KJC3_003841-T1.exon4KJC3_003841-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003841-T1.cdsKJC3_003841-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003841-T1.utr3p1KJC3_003841-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016488
DBxrefPFAM:PF13233
DBxrefPFAM:PF05347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3197480..3198575 +
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