|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3211429..3214024+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003846-T1 ID=KJC3_003846-T1|Name=KJC3_003846-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2596bp|location=Sequence derived from alignment at ch3:3211429..3214024+ (Aspergillus niger KJC3)
GCTCGCATCCTCTTTACTCTCCCTCCAGTGTCGCGGCGGATTCCTCCTTC
GGTCGTTCGTCTGCCAGGAATCTTCCCTTCATGTTGCGAGTACGCCAATG
CTGCTTCTTCCCTCGTTTGCCTCTACTTGCTATAAAGCCCCGCCCCGCCC
CCATAGTTACCTCTCCTGATCGCAAGTTTCAAAGTGGGGTGTCCAAGGTG
TGTACTTTTGGCTTTCATTTTTGGGGTACTTGTATAGCTGACACCTTTAA
CAGGCTGATCTGGGAACACTCAACGCTCATTGTACTCCTTTCACTCCCCG
CACATGCTTTCACATATCCTCGAGTTCACCCCGAGTTTTTGTCCACAACA
ATCGGTCCGTTAAGCCCGACATGGAGTCAGCAAACGCACCGGCATTCGAT
GCCTCTAGTATAGACAGTCGCCTTTGTCATGATGGCTCCAATTCTTCCGT
AGTGGGAGACGATAAGCCTGCATGGAGACCGTATAAAGGCCGTTGGGCTC
GTCAGAAAATGAGGAATACCAAGCGCAACAGCACAGAAAATCCGGACACG
ACGGCTCCAGGAAATGCTCCCCCGGCTGCTCGCCCGCGGCAAAAGCTACC
ACGACGGAGCAAACAGTTAGCCGAAAAGAACATTCGCGAAGAGATGCAAT
CTCAAGCATCACAGTCTGCCGGTTCAGCGTCCTATGTACCAGGTCAACCA
CCCCAGAACAGCTTTGGGGCGTTTGACAACATCAATTTGGCTGCTATGGT
TCCCCCGTTCCAGAATGGCATGGCTGCGCCAAACGAAAATGTTCCAGGGT
TTCAACAGCCCTTTTGGCAGCTCCCATGGGAGCAACAGCAATTGCTATTC
CATGCTCCTGTGGGTGAATCCACTAACCCTTCTTTCGGTTTCCCTCCGTT
GAATGACATGGGTGCGTTCCCTGGTGGATTACCTCCCATGTTTCCGCCTG
CGTTCATGAACTTTGCGTCAACGAATCCATTGATGGCAATGCCACCGTTC
GGACCCATGGCCTTCCAAGCAGCTGGCTCTGCTGGAATCAATACCCGCAA
TATGTCCAGTCAGGTCCCATCACCACGCCCGGGTTCTTCATCCAGGGCAC
GCGCTAGTCCTCGACCTCGTTCCAAAAGGTTCGACTCCCCGACACCACCT
AAAAGAGCTATGCCAACACCGGCCTACCTCGAGCAGTCGTCAAAGCCAGC
CAAACGGAACTCCTGGTCACAACCTCTACTAGTCATCCTGGATTTGAATG
GCACGCTCGTCCACCGGCCTGACCGGTACATGCCACCTCGGTTTAAGAGA
AGAGCGGGACTGGACATCTTCATACAGACGTTGATGCAGAAATACAAAGT
CATGATATGGTCGAGTGCCCGACCTCCCACCGTAGACGGCATCTGCCGCC
AACTCTTCATCAATGACAGCCGGACGCAAATCGTCGCCGAATGGCACCGC
GAGCACTTCAATCTCACTCCGCAGCAATACGATGCCAAAATCCAGGTCTA
CAAAACCCTCAGTACCGTATGGGCCGACGAAAAGGTCCAAGCATCATACC
CCAACCCCAAAGACCTAGGCTCGTCCGTGCCTGCAACCTTCCAAAAGACC
CGCTGGGACCAAACCAACACCATCTTAATCGACGACACCCGCCTCAAAGC
AAGCAGCGAACCAAGCAATCTCCTCGAAATCCCCACCTTCGACGGATCCT
CCGGCGCCGAAGACGCCGCCACATTAACCAAGGTCCTCCAAATGCTCGAG
GAGCTATCCTTACACGACGACGTCAGCCAAGTCCTCCACAAATGGTACAA
CTCGATCCCCAAAACAGGCAACCTCTGCCTGGACATCAAGCTCCAAGAAG
ACCCCGAAGCCCAACATCAACTCCAAACCCAATGCTACAACGGCCCCCTC
ACCCCAACGGAGATCGCCGAAGCACGCAAACAGCGCCGCAAAGCCCGCAA
GCGTGAAAAGGTCGCCGAGAAAGCCAGAGCCCGTCAGATCCAGAAGCAAG
AACAGCGTTTAGCCAAACAGTACCCACCCCCTCCCACATATACCCCAGGG
GTCGTCGCCTCATCTACTGTCGATGAGACGAATACTGTCACACCACGTAC
AGATCTCTCTTCCTCCAACTCATTCCCTCCTCATTCTCCATCATCACCTT
CATCTGACTCGACACCGGGTGGCACTGCTATACCAACAGGATATGATGTC
AATGACAAGGTCAAAAGGACTTTGAGGGTTGCTGGTGATGATGATGCGAG
TGATCGTTCCCCGTCGCCTGCTGCCTCAACTCAATCTGAGAATTATCTCT
TGGATCGGTTGGAGGAGTCATTGAAGACGGGTTGAGGGGCAGAGTGTTCC
TTTCTGGTTTTGTGTCCTTTCTCGTTTGGTGTGGATATTGTATTCTGTAT
TGCGGGAGGTGGGTGTTGTACATGATATGGTATGGTGTATATGTGGTAGG
AGTCAGACAGTCAGGGCTATGTTGTTAAAGAACAAAGCGGCTGGGCTGGT
ACCAGCTGGTTTACTTTACGTGTGCACAGTGAATTTCTCATGAACAGGCT
ATTATATTATAGAATACGATATGGCATATAGAGAGAGTACTATACC back to topCoding sequence (CDS) from alignment at ch3:3211429..3214024+ >KJC3_003846-T1 ID=KJC3_003846-T1|Name=KJC3_003846-T1|organism=Aspergillus niger KJC3|type=CDS|length=4398bp|location=Sequence derived from alignment at ch3:3211429..3214024+ (Aspergillus niger KJC3)
ATGTTGCGAGTACGCCAATGCTGCTTCTTCCCTCGTTTGCCTCTACTTGC
TATAAAGCCCCGCCCCGCCCCCATAGTTACCTCTCCTGATCGCAAGTTTC
AAAGTGGGGTGTCCAAGGCTGATCTGGGAACACTCAACGCTCATTGTACT
CCTTTCACTCCCCGCACATGCTTTCACATATCCTCGAGTTCACCCCGAGT
TTTTGTCCACAACAATCGGTCCGTTAAGCCCGACATGGAGTCAGCAAACG
CACCGGCATTCGATGCCTCTAGTATAGACAGTCGCCTTTGTCATGATGGC
TCCAATTCTTCCGTAGTGGGAGACGATAAGCCTGCATGGAGACCGTATAA
AGGCCGTTGGGCTCGTCAGAAAATGAGGAATACCAAGCGCAACAGCACAG
AAAATCCGGACACGACGGCTCCAGGAAATGCTCCCCCGGCTGCTCGCCCG
CGGCAAAAGCTACCACGACGGAGCAAACAGTTAGCCGAAAAGAACATTCG
CGAAGAGATGCAATCTCAAGCATCACAGTCTGCCGGTTCAGCGTCCTATG
TACCAGGTCAACCACCCCAGAACAGCTTTGGGGCGTTTGACAACATCAAT
TTGGCTGCTATGGTTCCCCCGTTCCAGAATGGCATGGCTGCGCCAAACGA
AAATGTTCCAGGGTTTCAACAGCCCTTTTGGCAGCTCCCATGGGAGCAAC
AGCAATTGCTATTCCATGCTCCTGTGGGTGAATCCACTAACCCTTCTTTC
GGTTTCCCTCCGTTGAATGACATGGGTGCGTTCCCTGGTGGATTACCTCC
CATGTTTCCGCCTGCGTTCATGAACTTTGCGTCAACGAATCCATTGATGG
CAATGCCACCGTTCGGACCCATGGCCTTCCAAGCAGCTGGCTCTGCTGGA
ATCAATACCCGCAATATGTCCAGTCAGGTCCCATCACCACGCCCGGGTTC
TTCATCCAGGGCACGCGCTAGTCCTCGACCTCGTTCCAAAAGGTTCGACT
CCCCGACACCACCTAAAAGAGCTATGCCAACACCGGCCTACCTCGAGCAG
TCGTCAAAGCCAGCCAAACGGAACTCCTGGTCACAACCTCTACTAGTCAT
CCTGGATTTGAATGGCACGCTCGTCCACCGGCCTGACCGGTACATGCCAC
CTCGGTTTAAGAGAAGAGCGGGACTGGACATCTTCATACAGACGTTGATG
CAGAAATACAAAGTCATGATATGGTCGAGTGCCCGACCTCCCACCGTAGA
CGGCATCTGCCGCCAACTCTTCATCAATGACAGCCGGACGCAAATCGTCG
CCGAATGGCACCGCGAGCACTTCAATCTCACTCCGCAGCAATACGATGCC
AAAATCCAGGTCTACAAAACCCTCAGTACCGTATGGGCCGACGAAAAGGT
CCAAGCATCATACCCCAACCCCAAAGACCTAGGCTCGTCCGTGCCTGCAA
CCTTCCAAAAGACCCGCTGGGACCAAACCAACACCATCTTAATCGACGAC
ACCCGCCTCAAAGCAAGCAGCGAACCAAGCAATCTCCTCGAAATCCCCAC
CTTCGACGGATCCTCCGGCGCCGAAGACGCCGCCACATTAACCAAGGTCC
TCCAAATGCTCGAGGAGCTATCCTTACACGACGACGTCAGCCAAGTCCTC
CACAAATGGTACAACTCGATCCCCAAAACAGGCAACCTCTGCCTGGACAT
CAAGCTCCAAGAAGACCCCGAAGCCCAACATCAACTCCAAACCCAATGCT
ACAACGGCCCCCTCACCCCAACGGAGATCGCCGAAGCACGCAAACAGCGC
CGCAAAGCCCGCAAGCGTGAAAAGGTCGCCGAGAAAGCCAGAGCCCGTCA
GATCCAGAAGCAAGAACAGCGTTTAGCCAAACAGTACCCACCCCCTCCCA
CATATACCCCAGGGGTCGTCGCCTCATCTACTGTCGATGAGACGAATACT
GTCACACCACGTACAGATCTCTCTTCCTCCAACTCATTCCCTCCTCATTC
TCCATCATCACCTTCATCTGACTCGACACCGGGTGGCACTGCTATACCAA
CAGGATATGATGTCAATGACAAGGTCAAAAGGACTTTGAGGGTTGCTGGT
GATGATGATGCGAGTGATCGTTCCCCGTCGCCTGCTGCCTCAACTCAATC
TGAGAATTATCTCTTGGATCGGTTGGAGGAGTCATTGAAGACGGGTTGAA
TGTTGCGAGTACGCCAATGCTGCTTCTTCCCTCGTTTGCCTCTACTTGCT
ATAAAGCCCCGCCCCGCCCCCATAGTTACCTCTCCTGATCGCAAGTTTCA
AAGTGGGGTGTCCAAGGCTGATCTGGGAACACTCAACGCTCATTGTACTC
CTTTCACTCCCCGCACATGCTTTCACATATCCTCGAGTTCACCCCGAGTT
TTTGTCCACAACAATCGGTCCGTTAAGCCCGACATGGAGTCAGCAAACGC
ACCGGCATTCGATGCCTCTAGTATAGACAGTCGCCTTTGTCATGATGGCT
CCAATTCTTCCGTAGTGGGAGACGATAAGCCTGCATGGAGACCGTATAAA
GGCCGTTGGGCTCGTCAGAAAATGAGGAATACCAAGCGCAACAGCACAGA
AAATCCGGACACGACGGCTCCAGGAAATGCTCCCCCGGCTGCTCGCCCGC
GGCAAAAGCTACCACGACGGAGCAAACAGTTAGCCGAAAAGAACATTCGC
GAAGAGATGCAATCTCAAGCATCACAGTCTGCCGGTTCAGCGTCCTATGT
ACCAGGTCAACCACCCCAGAACAGCTTTGGGGCGTTTGACAACATCAATT
TGGCTGCTATGGTTCCCCCGTTCCAGAATGGCATGGCTGCGCCAAACGAA
AATGTTCCAGGGTTTCAACAGCCCTTTTGGCAGCTCCCATGGGAGCAACA
GCAATTGCTATTCCATGCTCCTGTGGGTGAATCCACTAACCCTTCTTTCG
GTTTCCCTCCGTTGAATGACATGGGTGCGTTCCCTGGTGGATTACCTCCC
ATGTTTCCGCCTGCGTTCATGAACTTTGCGTCAACGAATCCATTGATGGC
AATGCCACCGTTCGGACCCATGGCCTTCCAAGCAGCTGGCTCTGCTGGAA
TCAATACCCGCAATATGTCCAGTCAGGTCCCATCACCACGCCCGGGTTCT
TCATCCAGGGCACGCGCTAGTCCTCGACCTCGTTCCAAAAGGTTCGACTC
CCCGACACCACCTAAAAGAGCTATGCCAACACCGGCCTACCTCGAGCAGT
CGTCAAAGCCAGCCAAACGGAACTCCTGGTCACAACCTCTACTAGTCATC
CTGGATTTGAATGGCACGCTCGTCCACCGGCCTGACCGGTACATGCCACC
TCGGTTTAAGAGAAGAGCGGGACTGGACATCTTCATACAGACGTTGATGC
AGAAATACAAAGTCATGATATGGTCGAGTGCCCGACCTCCCACCGTAGAC
GGCATCTGCCGCCAACTCTTCATCAATGACAGCCGGACGCAAATCGTCGC
CGAATGGCACCGCGAGCACTTCAATCTCACTCCGCAGCAATACGATGCCA
AAATCCAGGTCTACAAAACCCTCAGTACCGTATGGGCCGACGAAAAGGTC
CAAGCATCATACCCCAACCCCAAAGACCTAGGCTCGTCCGTGCCTGCAAC
CTTCCAAAAGACCCGCTGGGACCAAACCAACACCATCTTAATCGACGACA
CCCGCCTCAAAGCAAGCAGCGAACCAAGCAATCTCCTCGAAATCCCCACC
TTCGACGGATCCTCCGGCGCCGAAGACGCCGCCACATTAACCAAGGTCCT
CCAAATGCTCGAGGAGCTATCCTTACACGACGACGTCAGCCAAGTCCTCC
ACAAATGGTACAACTCGATCCCCAAAACAGGCAACCTCTGCCTGGACATC
AAGCTCCAAGAAGACCCCGAAGCCCAACATCAACTCCAAACCCAATGCTA
CAACGGCCCCCTCACCCCAACGGAGATCGCCGAAGCACGCAAACAGCGCC
GCAAAGCCCGCAAGCGTGAAAAGGTCGCCGAGAAAGCCAGAGCCCGTCAG
ATCCAGAAGCAAGAACAGCGTTTAGCCAAACAGTACCCACCCCCTCCCAC
ATATACCCCAGGGGTCGTCGCCTCATCTACTGTCGATGAGACGAATACTG
TCACACCACGTACAGATCTCTCTTCCTCCAACTCATTCCCTCCTCATTCT
CCATCATCACCTTCATCTGACTCGACACCGGGTGGCACTGCTATACCAAC
AGGATATGATGTCAATGACAAGGTCAAAAGGACTTTGAGGGTTGCTGGTG
ATGATGATGCGAGTGATCGTTCCCCGTCGCCTGCTGCCTCAACTCAATCT
GAGAATTATCTCTTGGATCGGTTGGAGGAGTCATTGAAGACGGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003846-T1.utr5p1 | KJC3_003846-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003846-T1.utr3p1 | KJC3_003846-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR004274 |
| DBxref | PFAM:PF03031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3211429..3214024 + |
|
