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KJC3_003864-T1, KJC3_003864-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003864-T1
Unique NameKJC3_003864-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3259792..3260829+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003864-T1 ID=KJC3_003864-T1|Name=KJC3_003864-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1038bp|location=Sequence derived from alignment at ch3:3259792..3260829+ (Aspergillus niger KJC3)
CACCGCCATGTACCGGCCGCCTTAACTTGTTTGGTGAGGGCAAATGACAG
TGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGTGGATCTCGAGGAC
CGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCTCTGCGTCGCACAA
GGGCGGGGGTTCATATCTACCGGTACCGGAGGGTGTGTTTGCCCCCCCGG
ACGTCTTCCCCGTACACCTCTTCTTCCACCCCCTATCTACAAGATACTAA
CCGTCAATTCCTACGCTCCAGATGCTACAGGAATAGTGCCCAGTCATGCA
CTGCTCCTCCTGTCGGATTCAGCCCTCCCCTTGGGCTCGTTCGCCTACTC
CAGCGGTCTCGAGTCGTATTTGGCGCACAACAAACCCCTTCCTCGCTCGG
TGACGCCGATTGCATCCTTCCAGCGCTTCCTGAAGCTCTCGATCGCTTCA
ATAGCAAGTACCTCACTTCCATACGTTCTGGCAGGATACAGACGCCCAGA
AGACTTGGAGACCCTGGACAATGACCTCGATGCGTCCACCCCCTGCATAG
TTGCCCAGCGGGCGAGTCTCGCCCAAGGGCGGGCATTGCTCGGGGTCTGG
GAGCGCGCTTTCCGGAAAACGTATGCGTTCAACCCATTCCACGCTAATCC
CAACACTGCCGAGGCTGTGAAGGTGGTCGAGGAATTCTCCGAGATATTGA
AGTCCTCGTTGGGTACTGATGAACTAGGGCCCAAAGGTCACTTTGCGCCA
TTATGGGGGGTGGTGTGTCTGGCCATGGGCATGGACGCCCACCAGACTGT
CTATGTCTTTATGTTGAACCATGCAAAGGCAGTCCTTAGCGCTGCTGTCC
GTGCGTCCGTCATGGGCCCGTATCAGGCCCAGAACATTCTGGCCAGCAAG
GGCCTACAAAACATGATCACTCAACGCATAGAACGGGAGTGGGATACTCC
CGTCGAAGATGCAGGACAAATCGTCCCACCCCTCGATCTTTGGGTGGGAC
GACATGAACTTCTATATAGTAGAATCTTTAACTCATAA
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Coding sequence (CDS) from alignment at ch3:3259792..3260829+

>KJC3_003864-T1 ID=KJC3_003864-T1|Name=KJC3_003864-T1|organism=Aspergillus niger KJC3|type=CDS|length=1812bp|location=Sequence derived from alignment at ch3:3259792..3260829+ (Aspergillus niger KJC3)
ATGACAGTGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGTGGATCT
CGAGGACCGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCTCTGCGT
CGCACAAGGGCGGGGGTTCATATCTACCGGTACCGGAGGATGCTACAGGA
ATAGTGCCCAGTCATGCACTGCTCCTCCTGTCGGATTCAGCCCTCCCCTT
GGGCTCGTTCGCCTACTCCAGCGGTCTCGAGTCGTATTTGGCGCACAACA
AACCCCTTCCTCGCTCGGTGACGCCGATTGCATCCTTCCAGCGCTTCCTG
AAGCTCTCGATCGCTTCAATAGCAAGTACCTCACTTCCATACGTTCTGGC
AGGATACAGACGCCCAGAAGACTTGGAGACCCTGGACAATGACCTCGATG
CGTCCACCCCCTGCATAGTTGCCCAGCGGGCGAGTCTCGCCCAAGGGCGG
GCATTGCTCGGGGTCTGGGAGCGCGCTTTCCGGAAAACGTATGCGTTCAA
CCCATTCCACGCTAATCCCAACACTGCCGAGGCTGTGAAGGTGGTCGAGG
AATTCTCCGAGATATTGAAGTCCTCGTTGGGTACTGATGAACTAGGGCCC
AAAGGTCACTTTGCGCCATTATGGGGGGTGGTGTGTCTGGCCATGGGCAT
GGACGCCCACCAGACTGTCTATGTCTTTATGTTGAACCATGCAAAGGCAG
TCCTTAGCGCTGCTGTCCGTGCGTCCGTCATGGGCCCGTATCAGGCCCAG
AACATTCTGGCCAGCAAGGGCCTACAAAACATGATCACTCAACGCATAGA
ACGGGAGTGGGATACTCCCGTCGAAGATGCAGGACAAATCGTCCCACCCC
TCGATCTTTGGGTGGGACGACATGAACTTCTATATAGTAGAATCTTTAAC
TCATAAATGACAGTGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGT
GGATCTCGAGGACCGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCT
CTGCGTCGCACAAGGGCGGGGGTTCATATCTACCGGTACCGGAGGATGCT
ACAGGAATAGTGCCCAGTCATGCACTGCTCCTCCTGTCGGATTCAGCCCT
CCCCTTGGGCTCGTTCGCCTACTCCAGCGGTCTCGAGTCGTATTTGGCGC
ACAACAAACCCCTTCCTCGCTCGGTGACGCCGATTGCATCCTTCCAGCGC
TTCCTGAAGCTCTCGATCGCTTCAATAGCAAGTACCTCACTTCCATACGT
TCTGGCAGGATACAGACGCCCAGAAGACTTGGAGACCCTGGACAATGACC
TCGATGCGTCCACCCCCTGCATAGTTGCCCAGCGGGCGAGTCTCGCCCAA
GGGCGGGCATTGCTCGGGGTCTGGGAGCGCGCTTTCCGGAAAACGTATGC
GTTCAACCCATTCCACGCTAATCCCAACACTGCCGAGGCTGTGAAGGTGG
TCGAGGAATTCTCCGAGATATTGAAGTCCTCGTTGGGTACTGATGAACTA
GGGCCCAAAGGTCACTTTGCGCCATTATGGGGGGTGGTGTGTCTGGCCAT
GGGCATGGACGCCCACCAGACTGTCTATGTCTTTATGTTGAACCATGCAA
AGGCAGTCCTTAGCGCTGCTGTCCGTGCGTCCGTCATGGGCCCGTATCAG
GCCCAGAACATTCTGGCCAGCAAGGGCCTACAAAACATGATCACTCAACG
CATAGAACGGGAGTGGGATACTCCCGTCGAAGATGCAGGACAAATCGTCC
CACCCCTCGATCTTTGGGTGGGACGACATGAACTTCTATATAGTAGAATC
TTTAACTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016151nickel cation binding
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003864KJC3_003864Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003864-T1.utr5p1KJC3_003864-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003864-T1.exon1KJC3_003864-T1.exon1Aspergillus niger KJC3exon
KJC3_003864-T1.exon2KJC3_003864-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003864-T1.cdsKJC3_003864-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003864-T1KJC3_003864-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002639
DBxrefInterPro:IPR038277
DBxrefPFAM:PF01730
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3259792..3260829 +
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