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KJC3_003874-T1, KJC3_003874-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003874-T1
Unique NameKJC3_003874-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3298048..3301619+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003874-T1 ID=KJC3_003874-T1|Name=KJC3_003874-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3572bp|location=Sequence derived from alignment at ch3:3298048..3301619+ (Aspergillus niger KJC3)
CTAAATTATTATATTCCTGATTTTCCCTTTTCTGATTTATTTCTATCTGC
CTCTTTCCCCGTCTCGTTCCACGGATGTTTAAGGTCAACTATTGTCCCCT
CTTGTCTTCCGAGTCCACCACACTCCTTCCCTTCAAGCAACTCCCCCATT
CACTTTTGAAACATTCCTGGTCTCTACTTGCCTTTGGAAATTCATCGCAC
TTCGTTTCTCGCATGGCCCGGGTGGCTTTACGTGAAGCTCCAAAGTGGAT
AAATCGGCTTACATACCTGCTCCGAAACAGGCACCGAACAGCTCATACGG
CGTAAGCTGAGCTGGTCTCTCTCTCTCTCTTTCCCTCACTATCGCTTCTC
GCGCAGTGGATTGTTGCCCATCCAACAAGTCCCGAATCCCGCATCGTCTT
GCGCAGCAGCATCAGCAACAGCCTTTTGGGTTGAAGAGAAACTCCCGGGC
CCAGGGTATTTAAACTCCCTGTCAAAACGGGTTTCTCCTTGCGAGCAGAA
AGCTTGGGAATTCCCGCAGCTGGTTTGGTTGGAGACACAACCTACCTCGA
TCCGATCGCTATCCGTGGAACCGGAGCTCCAGTCGACCCAGCTGCACTAG
GGCCAGACGCTGCTCTCCAGATCCAACCCTTTCCCTGTGCGAGGATTTGG
GAAAAAGGACGGGCCCGTGCTCGCTGTCGATCCGGCTCGCCCAAGTCTGG
TAGTAGCCCTTAAACTCAGAAGGAGGGGGGCGCTTTAAACTCGCGCCATC
GGCCCTCTTCTACGGTTCAACCATCACCGTCAGCTCTCTCGACTTGTCAT
TCTCTCACCTTCGCACCAGAGGTTCCCACTCCTCGTCTCTCCTAAAGGTT
ATTTGCCTCCCCCTCCCTGCTTTTCTGGAGTTTCCCCCCAATTCACTCCC
TTCATCCCCCTCCCTCCCTCCCCCCCCCTCCCATTCATTTTTTAGCTCGG
GACATCGTCCTGGCTTTTGCTGCAACGGCCGAACAACAAAGAAAGAAATT
CTGACAGCCTGTCAGGCGGGATTGTTCTGATCCTATTCACTGCTATTCTT
CCTCTGCTTGGTATCGAAACCCCAGTGTCACCCTGGCCAATCCGTCTAGC
CGAGTTACTGGGAAACCTTGATCAACGGTGGTGTTAACCTTGATTGATTT
TACCTCTTTGCCCCCCTTTCAACTAGGTTCGAACCTACAAACAAACGCAA
AACAATGGTCAACGGCACCGCTACGGTGTTGGAGCCCACCTTCACGGGAT
ATGTCGCGACAACACAGGATGCGCTGATTCTCTTCGAGGCCTGTCTGACG
GGAGTGCTGCACCATGTGCCCCGTCGGCCTCACGATCGCGAACGTGGTCA
CCTGGTCCGCAGTGGCAGTGTGTTCATCTACGAGGAGAATTCGTCGGGAA
TTAAGCGATGGACGGATGGAGTGACCTGGAGTCCCAGTCGAATCCTGGGC
AACTTTCTCGTCTACCGCGAACTGGAGAAGCCGTTTCCCCCCGGCGAAAA
GAAGCGAGCGATGAAGAAGGCCAATCGACGCCCGGTGCCTTCCACAAGAC
CTGGGGAGCCGTATCCGCGACAGGACAGCAACGGCGGTTATTCGCCGTCC
TCGACACCCGGTCAGTATGCTGGAGACCGACCACACCAGTCGGACGTGGA
GAGAGCGTTGGTAGGCTCGCTGGTGGACTCGTATGGCTTCAAAGATTCGG
GACTCGTGAAGAAGACGATGAGTGTGACGGTTTCGGGGGTGACACACCAC
TTGGTCTCGTATTACAGCGTGGAGGACGTGATGCGTGGGCTGCTGAACCC
GCCATCGATGGTCGACTCGCTGCGATACATACGGCCTCGTGCAGAGCTGA
CGCAGAAGCAAAGCTTCCGGGCCCCCATCGATGACTTGGAATCAGGATCT
TTAGAGAACCCGAACGACCCCCATGCGATATACGGATACCGACCTCAGTT
GGTAGCGCCGCCCGGGTATGCGATTCCCAACCCTCATCCCGAATTTTACA
TGCACCCCGCGCCGTACGCTGCCACCCATGCTCCGCAGACTGCGGCAATC
CCGGGATACTCGATGGCAGGGTCAATTTCGGCGCAGTCGGCTTCTAATCC
CTATCTTCCCGCGCCGTCTGCACCTACCCAAATCCCGCAGAAGCCAGACG
ACTATTCCCAATTCCGGACACCCACTCAGTATGGAACGAGCTTTGATGCT
CTGGGTCACAGTGCTCTGTCGTCGTCGATTCCTTCTACACTCAACACGGG
CATTCCGAGTTCCTTGAGCGATCGCAACCGATCCCAGTCGAATCACAGCC
CTTCCGCCTATCGCAACTCGTCAATATCCTCACGCAGCGTTGCGACCGAC
GCCACCTCGCCCATCGACCCAGCAACGCCGGCCACATATTCACGGGGAGG
AAGCTTCAGCCTGGGCCCGCTTGATGGACCGCATCAACCACTTGAACAGC
GTGGCATGGCTGCGTTTGACCCAGGCATCCCGCGCCGGGAGTCGAACCCG
ATGCATGCGCCTTATTATCCAGGCGCAGACCGGCATCCGTACTACGTGAG
CGCTACCGCTCCGGCAGCTCATGCCAATTACCCCGTGTCGACATGGGCAG
CGGCAGCTGCTCCAGCGCAGCCTCAGATATGACTCTAAATTCTTCAGCGA
CCATGATTTGTGGTTTTACCCTCGCTTTATCTTTATTTCTCATACCCCCC
TCTTTATTTTCTTCCGTACGAATTTTTATTTTTCTATTGTTTTCCAGAAG
GGCGGCAATTTGGGAATAGACTATGCATATACGCTGTGGATGAATACCCG
GGTGGGAAAACGCTCTTAGAGGAGACATGGGTGGCTTTTTCCTTGTTGCT
GCTGCTTCTGTTACCCCTACGATGATACGATGTCGATCAAAATACCTTCT
TTTTTCTTTATATCTTTATTAGCCTGTTCGCGGGTAGTACCCTGGGGGGT
TTTCTGGGATTTATTCCGTGTTTTTGCTGTTTGGAGGGTTCCTGATTTGC
GCGAGTGTGGATTGGTTTTCTGTTCTTTTTTCATGCGATTATGAGCAATG
GGACGGTTTTGGGTGGCATGGTTCTGGGGCGGCTATCTGTCAACTCTTTT
GTTCTGTTTTGTTGTCTTGCTACGTGCTACTACTTGATGCTCATTGCTTT
TGTGTGCTTGGTTCGCTATCATCATATCCTTAGTTGTTACATATGGGAGA
AACCATGGGTCTTTAGTGGTGTACATGGAAACTTTTTTGACGAGAAGATC
CCGCCAGTGATGCATGCATACAACCAATCAGTCTATCAATCCTGGGGTTT
CTTTAAAAAGCTCATCTTCCCCAATGTGCGCTGCTTTCGCTTTACGCAAC
TATTAGTGGGCGGGTATTGTGGTTCGTTTTGATGCTACGGAAGGGCTTTT
TTGAGGTCATGTGCGGAAAGGACAAGCTGATGATATCATCAATTAACATG
TCATCACATCATTGTCGGGGGTCTAGACATCCCGATTATTCAAAGGATTA
ATTATTCAATCTTCTATTAAATATTATGAGAATGCAGTGGTTGTTACTAC
TACAACTACTTCTAGCTAATAA
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Coding sequence (CDS) from alignment at ch3:3298048..3301619+

>KJC3_003874-T1 ID=KJC3_003874-T1|Name=KJC3_003874-T1|organism=Aspergillus niger KJC3|type=CDS|length=1428bp|location=Sequence derived from alignment at ch3:3298048..3301619+ (Aspergillus niger KJC3)
ATGGTCAACGGCACCGCTACGGTGTTGGAGCCCACCTTCACGGGATATGT
CGCGACAACACAGGATGCGCTGATTCTCTTCGAGGCCTGTCTGACGGGAG
TGCTGCACCATGTGCCCCGTCGGCCTCACGATCGCGAACGTGGTCACCTG
GTCCGCAGTGGCAGTGTGTTCATCTACGAGGAGAATTCGTCGGGAATTAA
GCGATGGACGGATGGAGTGACCTGGAGTCCCAGTCGAATCCTGGGCAACT
TTCTCGTCTACCGCGAACTGGAGAAGCCGTTTCCCCCCGGCGAAAAGAAG
CGAGCGATGAAGAAGGCCAATCGACGCCCGGTGCCTTCCACAAGACCTGG
GGAGCCGTATCCGCGACAGGACAGCAACGGCGGTTATTCGCCGTCCTCGA
CACCCGGTCAGTATGCTGGAGACCGACCACACCAGTCGGACGTGGAGAGA
GCGTTGGTAGGCTCGCTGGTGGACTCGTATGGCTTCAAAGATTCGGGACT
CGTGAAGAAGACGATGAGTGTGACGGTTTCGGGGGTGACACACCACTTGG
TCTCGTATTACAGCGTGGAGGACGTGATGCGTGGGCTGCTGAACCCGCCA
TCGATGGTCGACTCGCTGCGATACATACGGCCTCGTGCAGAGCTGACGCA
GAAGCAAAGCTTCCGGGCCCCCATCGATGACTTGGAATCAGGATCTTTAG
AGAACCCGAACGACCCCCATGCGATATACGGATACCGACCTCAGTTGGTA
GCGCCGCCCGGGTATGCGATTCCCAACCCTCATCCCGAATTTTACATGCA
CCCCGCGCCGTACGCTGCCACCCATGCTCCGCAGACTGCGGCAATCCCGG
GATACTCGATGGCAGGGTCAATTTCGGCGCAGTCGGCTTCTAATCCCTAT
CTTCCCGCGCCGTCTGCACCTACCCAAATCCCGCAGAAGCCAGACGACTA
TTCCCAATTCCGGACACCCACTCAGTATGGAACGAGCTTTGATGCTCTGG
GTCACAGTGCTCTGTCGTCGTCGATTCCTTCTACACTCAACACGGGCATT
CCGAGTTCCTTGAGCGATCGCAACCGATCCCAGTCGAATCACAGCCCTTC
CGCCTATCGCAACTCGTCAATATCCTCACGCAGCGTTGCGACCGACGCCA
CCTCGCCCATCGACCCAGCAACGCCGGCCACATATTCACGGGGAGGAAGC
TTCAGCCTGGGCCCGCTTGATGGACCGCATCAACCACTTGAACAGCGTGG
CATGGCTGCGTTTGACCCAGGCATCCCGCGCCGGGAGTCGAACCCGATGC
ATGCGCCTTATTATCCAGGCGCAGACCGGCATCCGTACTACGTGAGCGCT
ACCGCTCCGGCAGCTCATGCCAATTACCCCGTGTCGACATGGGCAGCGGC
AGCTGCTCCAGCGCAGCCTCAGATATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003874KJC3_003874Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003874-T1KJC3_003874-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003874-T1.utr5p1KJC3_003874-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003874-T1.utr5p2KJC3_003874-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003874-T1.exon1KJC3_003874-T1.exon1Aspergillus niger KJC3exon
KJC3_003874-T1.exon2KJC3_003874-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003874-T1.cdsKJC3_003874-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003874-T1.utr3p1KJC3_003874-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018608
DBxrefPFAM:PF09729
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3298048..3301619 +
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