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KJC3_003902-T1, KJC3_003902-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003902-T1
Unique NameKJC3_003902-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3386174..3387102+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003902-T1 ID=KJC3_003902-T1|Name=KJC3_003902-T1|organism=Aspergillus niger KJC3|type=mRNA|length=929bp|location=Sequence derived from alignment at ch3:3386174..3387102+ (Aspergillus niger KJC3)
ATGGTTAGGTCAACACAGATTGCCAGAATTGATGGTAAGATGCTGTCCGG
AGCTTGTTCAGGGGGAACAGAGTGAGGGGTGAGCCAAGTGTGCCGTTTAC
TGATATTACGAGACAGGCTTGATGCTGGCGGCATCGGTGGATGATGAGCA
GGTTAGTTTGGTTCAGGGCGCATTCACTGCTCTATTGTTGCTTGATAACT
GACAATGGGATTCCTGGTGTTCTTCTCTAGGCTGAAGTGGAGCTCTCTGA
GATCAAGTCTCAGGCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGG
CGCCGCAAGCCAGTATTGAGTCCGGTCAATTTAATCTACAGTATGTCTGA
CATTTTGGATTTTGTACGACGCAAAAACTAGTCAGTGCAGTTGGCTAAAG
ACCGGTGTTAGCTATCTTATCAAGGATGATATCTGCTTCCTTTGCATATG
CGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATCTAGCCGATCTCG
CAACCGAGTTCACTACGACGTATTCCCCGACACAGTATCAATCTCCGACT
CTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCATTCAGCGCACCAA
AAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCGACCGTCTGAACG
ATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAACATCGAGGACCTT
CTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATTGTCGGGCCGTCT
ACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTACGGATCAACTGGG
AGTTGTTGGTCAAACAGGTAGGTTCAATGTTGATGTGACGGCAGACTTGA
CGCTAACCTGTCGCAGTACGGACCTGTCGCAGGTGTTGGGTTTATCTTCC
TTTTCCTCATTTGGTGGCGCTTCTTTTAA
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Coding sequence (CDS) from alignment at ch3:3386174..3387102+

>KJC3_003902-T1 ID=KJC3_003902-T1|Name=KJC3_003902-T1|organism=Aspergillus niger KJC3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch3:3386174..3387102+ (Aspergillus niger KJC3)
ATGGTTAGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGC
ATCGGTGGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTC
AGGCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCC
AGTATTGAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATAT
CTGCTTCCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCA
CCTATCTAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACA
CAGTATCAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACAC
TTTCATTCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAA
ATCTCGACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACC
AAGAACATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGG
CGAATTGTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCG
CGGTACGGATCAACTGGGAGTTGTTGGTCAAACAGTACGGACCTGTCGCA
GGTGTTGGGTTTATCTTCCTTTTCCTCATTTGGTGGCGCTTCTTTTAAAT
GGTTAGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCAT
CGGTGGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAG
GCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAG
TATTGAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATATCT
GCTTCCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACC
TATCTAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACACA
GTATCAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTT
TCATTCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAAT
CTCGACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAA
GAACATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCG
AATTGTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCG
GTACGGATCAACTGGGAGTTGTTGGTCAAACAGTACGGACCTGTCGCAGG
TGTTGGGTTTATCTTCCTTTTCCTCATTTGGTGGCGCTTCTTTTAAATGG
TTAGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCATCG
GTGGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAGGC
TAAGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAGTA
TTGAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATATCTGC
TTCCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACCTA
TCTAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACACAGT
ATCAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTTTC
ATTCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCT
CGACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGA
ACATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAA
TTGTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGT
ACGGATCAACTGGGAGTTGTTGGTCAAACAGTACGGACCTGTCGCAGGTG
TTGGGTTTATCTTCCTTTTCCTCATTTGGTGGCGCTTCTTTTAAATGGTT
AGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCATCGGT
GGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAGGCTA
AGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAGTATT
GAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATATCTGCTT
CCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATC
TAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACACAGTAT
CAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCAT
TCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCG
ACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAAC
ATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATT
GTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTAC
GGATCAACTGGGAGTTGTTGGTCAAACAGTACGGACCTGTCGCAGGTGTT
GGGTTTATCTTCCTTTTCCTCATTTGGTGGCGCTTCTTTTAAATGGTTAG
GTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCATCGGTGG
ATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAGGCTAAG
ATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAGTATTGA
GTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATATCTGCTTCC
TTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATCTA
GCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACACAGTATCA
ATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCATTC
AGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCGAC
CGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAACAT
CGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATTGT
CGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTACGG
ATCAACTGGGAGTTGTTGGTCAAACAGTACGGACCTGTCGCAGGTGTTGG
GTTTATCTTCCTTTTCCTCATTTGGTGGCGCTTCTTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003902KJC3_003902Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003902-T1KJC3_003902-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003902-T1.exon1KJC3_003902-T1.exon1Aspergillus niger KJC3exon
KJC3_003902-T1.exon2KJC3_003902-T1.exon2Aspergillus niger KJC3exon
KJC3_003902-T1.exon3KJC3_003902-T1.exon3Aspergillus niger KJC3exon
KJC3_003902-T1.exon4KJC3_003902-T1.exon4Aspergillus niger KJC3exon
KJC3_003902-T1.exon5KJC3_003902-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003902-T1.cdsKJC3_003902-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264IG5
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR042855
DBxrefInterPro:IPR001388
DBxrefInterPro:IPR010908
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3386174..3387102 +
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