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KJC3_003931-T1, KJC3_003931-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003931-T1
Unique NameKJC3_003931-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3469005..3469793+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003931-T1 ID=KJC3_003931-T1|Name=KJC3_003931-T1|organism=Aspergillus niger KJC3|type=mRNA|length=789bp|location=Sequence derived from alignment at ch3:3469005..3469793+ (Aspergillus niger KJC3)
ATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGTTCCCAAGAC
CAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTGGCGATGAGC
CCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGCAACGAGAAG
AAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGTTCCCGGCAT
CACTCGTGTCACTCTCCGTCGTCCCAAGAACGTATGAATACGGCCCTGTC
CCTCCTTCCCGTGCGACGCTTAACAAACCCTGCATTCGTGCAGTTATTGT
GGGCGACGAAGGATTTTCAGACTGCAGAGGCTAATCTATCGCATATAGAT
CCTTTTCGTCATCAACCAGCCCGATGTCTACCGTTCCCCCTCCAGCAACA
CCTGGATGTATGTGTCTCCATGGACTATGACGAATTGATGAATCATATCA
AGCTTACATTGTTGCGACAGCATCTTCGGTGAGGCCAAGATCGAGGACCT
GAACGCCACCGCCCAGGCTACCGCTGCCCAGCAGCTTGCTGAGGCTGCTG
CCAACGAGCACGCTGGTCACGACCACGAGCACGACCACGGCAAGGGCAAG
GCCCCCGAGGCTGAGGCCAAGAAGGAGGAGGAAGAGGATGATGGCGAGGA
GGTCGATGAGTCTGGTCTTGAGGCTAAGGACATCGAACTGGTTATGGCCC
AGGCTAATGTGTCCCGCAAGAAGGCCGTCAAGGCTCTCCGGGAGAACGAC
AACGATATCGTCAACTCCATCATGGCTCTCAGCATATGA
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Coding sequence (CDS) from alignment at ch3:3469005..3469793+

>KJC3_003931-T1 ID=KJC3_003931-T1|Name=KJC3_003931-T1|organism=Aspergillus niger KJC3|type=CDS|length=1827bp|location=Sequence derived from alignment at ch3:3469005..3469793+ (Aspergillus niger KJC3)
ATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGTTCCCAAGAC
CAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTGGCGATGAGC
CCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGCAACGAGAAG
AAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGTTCCCGGCAT
CACTCGTGTCACTCTCCGTCGTCCCAAGAACATCCTTTTCGTCATCAACC
AGCCCGATGTCTACCGTTCCCCCTCCAGCAACACCTGGATCATCTTCGGT
GAGGCCAAGATCGAGGACCTGAACGCCACCGCCCAGGCTACCGCTGCCCA
GCAGCTTGCTGAGGCTGCTGCCAACGAGCACGCTGGTCACGACCACGAGC
ACGACCACGGCAAGGGCAAGGCCCCCGAGGCTGAGGCCAAGAAGGAGGAG
GAAGAGGATGATGGCGAGGAGGTCGATGAGTCTGGTCTTGAGGCTAAGGA
CATCGAACTGGTTATGGCCCAGGCTAATGTGTCCCGCAAGAAGGCCGTCA
AGGCTCTCCGGGAGAACGACAACGATATCGTCAACTCCATCATGGCTCTC
AGCATATGAATGGCCGACCCCCGTGTTGAAGAGCTCCCCGACGAGGAGGT
TCCCAAGACCAACGTTGAGGATGCCGGCAGCTCCTCCGAGTCTGAGGCTG
GCGATGAGCCCACCATCCCCGGTGGTGCCGCTGTCACCATCCACTCTCGC
AACGAGAAGAAGGCTCGCAAGGCCATTGGCAAGCTCGGCCTGAAGCACGT
TCCCGGCATCACTCGTGTCACTCTCCGTCGTCCCAAGAACATCCTTTTCG
TCATCAACCAGCCCGATGTCTACCGTTCCCCCTCCAGCAACACCTGGATC
ATCTTCGGTGAGGCCAAGATCGAGGACCTGAACGCCACCGCCCAGGCTAC
CGCTGCCCAGCAGCTTGCTGAGGCTGCTGCCAACGAGCACGCTGGTCACG
ACCACGAGCACGACCACGGCAAGGGCAAGGCCCCCGAGGCTGAGGCCAAG
AAGGAGGAGGAAGAGGATGATGGCGAGGAGGTCGATGAGTCTGGTCTTGA
GGCTAAGGACATCGAACTGGTTATGGCCCAGGCTAATGTGTCCCGCAAGA
AGGCCGTCAAGGCTCTCCGGGAGAACGACAACGATATCGTCAACTCCATC
ATGGCTCTCAGCATATGAATGGCCGACCCCCGTGTTGAAGAGCTCCCCGA
CGAGGAGGTTCCCAAGACCAACGTTGAGGATGCCGGCAGCTCCTCCGAGT
CTGAGGCTGGCGATGAGCCCACCATCCCCGGTGGTGCCGCTGTCACCATC
CACTCTCGCAACGAGAAGAAGGCTCGCAAGGCCATTGGCAAGCTCGGCCT
GAAGCACGTTCCCGGCATCACTCGTGTCACTCTCCGTCGTCCCAAGAACA
TCCTTTTCGTCATCAACCAGCCCGATGTCTACCGTTCCCCCTCCAGCAAC
ACCTGGATCATCTTCGGTGAGGCCAAGATCGAGGACCTGAACGCCACCGC
CCAGGCTACCGCTGCCCAGCAGCTTGCTGAGGCTGCTGCCAACGAGCACG
CTGGTCACGACCACGAGCACGACCACGGCAAGGGCAAGGCCCCCGAGGCT
GAGGCCAAGAAGGAGGAGGAAGAGGATGATGGCGAGGAGGTCGATGAGTC
TGGTCTTGAGGCTAAGGACATCGAACTGGTTATGGCCCAGGCTAATGTGT
CCCGCAAGAAGGCCGTCAAGGCTCTCCGGGAGAACGACAACGATATCGTC
AACTCCATCATGGCTCTCAGCATATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005854nascent polypeptide-associated complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EGD2KJC3_003931Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003931-T1.exon1KJC3_003931-T1.exon1Aspergillus niger KJC3exon
KJC3_003931-T1.exon2KJC3_003931-T1.exon2Aspergillus niger KJC3exon
KJC3_003931-T1.exon3KJC3_003931-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003931-T1.cdsKJC3_003931-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003931-T1KJC3_003931-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016641
DBxrefInterPro:IPR038187
DBxrefInterPro:IPR002715
DBxrefPFAM:PF01849
ProductGAL4 enhancer protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3469005..3469793 +
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