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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3471452..3473609+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003933-T2 ID=KJC3_003933-T2|Name=KJC3_003933-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2158bp|location=Sequence derived from alignment at ch3:3471452..3473609+ (Aspergillus niger KJC3)
CTCTGGTTTGCTCCCCATATTTTCCCCAGTCTCAAGGACGAGTTCCTTCC
GATCGAATTGCTGTTCGGTCTTGATTGCCGCATTGAGCAAATAGTTTGTT
TGTCATGGTCGTAGTTTGCAAGGCTCTGGGATTAGACTCGAGACTTAGCC
GATCCCGAACAGCCTAAACTCTCTGCGCGAACACGACACAGGGGATCCTG
CACTTCATGGCTGGCTCTGGATTGCACATCCACGTCGTGATGGATCAATT
ATGAGCCACAAAGCCAAATCATCAAAGTCAGAGGCTTAAGTTTACTGACT
GCGAACCTATTTGTTATCGGTTCAATCAAATTACGATCTCCACTCTGACA
GATTCGCGCCCCTATTTTTGCTTCGCCAGGAACTCAGCTGGGAAACTGGA
TGGTCTAGACCATAATTTGATGACCACTAAACACCGATGGTCCTGTCAAA
CTACAAGTACTTAAGTTCAGGATGGTAAGCTTATCGCCAATGAATGTTGA
AGCTCAGGCCATCCTCTCGAAGTGCCGTCCCTCAAGACTCTATATTATAT
ATCCCTCCAGTATACGGATAATTACTAGTTGAAAGGCCATTAGTATTCAG
TTCACAATGCCTAACGTCTCGCAGCCGGCCCTTGCCGGATTATCAGCACT
CGAAAGACTACCGGTGGAAATCATCCAAGAAATCTTCCTCCACTGTCTCG
AAGTTAATCTCCCGCGAGCCTCCATACACATCTCCCGGGCTCTTTCCAAC
ACAGTCCTGTACACATGGGTCACTCGCTATGTCTTCAGCAGCACCAACGA
AAGCTCAAGACAAGACTTCTTCACGCCTGATTTTCTTCCCTGGCCTCTTG
ATGTTTTTGCACTCTCTCCCAATGAAAGGAGAGACCTGCAAAACGTCATC
CTCAGTTGTCGCTGGTGTACACTACCTTTGATCCGCAAATGCCAGAGGGA
ATACATAGAGCATACGATCCGCCGCAAATGTCTGCAGCTAGACTTATCAC
CTGGAGACCGCCAGGTCCTCATCAATATTGGCGAGCAATTCGACAAAGAT
TTACCTCTTATGCCTGATGAAACACCCCATGCTCATCGCGGAAAAGGCGA
CCTGATCCTCAAAGCCAAAATCCCAAAGTCAGATGTGGACTGCAAAGTTG
CAGTGTGGTTCAATGCTGGCGCGGTCCAGATCCGTCCATCCAGCGAGATA
TACCAGGAGACTGACATCTTCCGCCTACCATGCTTCGCGGCCAATCTACC
AGTTCGGGTCCCGGACAAGCTACTTTTTCCTCCATGGACTGAATCTAAGC
TGGACTTCCTCGAGTTGCTCTCGATGGACGGCTATCTTGACGAGGATCCC
GAGCATCCGCGGGCGAAGCGGATCCTTCGACAGACGATTCGAGACCGTGA
CCTCGCAACGTTTAAGCGATTGCTGAGCATGCGTATTCGTGTGCCGTGGT
ACAAGTACCCCATTCGGTGGCCGGTTCTTCCAAATCACTTCTACGTGGCT
TTGAAGTATGCGGATGAGGTGAAGGACCCTTTCGTCAGGTTGCTGGTGAG
TCAGCGATGGGAGGATATCCCATCCGACGACTTTCAGCTCAAGGATCAAT
TGATGGCTAAACTTGGGACAGGCATCTCGGGATAAGTTGCCAGGATGACC
TCAGTCCGCAGGACCCACACGATATACCCAACTACGGGGTACACCCAATT
TACTTCGACTCTTATAGTTTGGTGAAAATTTCATTGCTCGAAATGGAAAC
ACAGGATATCAGGCAGGACACAAAGGACGAGAAGGAAACGCAAGGAACCA
CAAAAACTCCGAACTGATATCCACATTCATATCCATATCCGTCATAACTT
CATGGCGATTAAGTCAAGGTCTTGGTCGAGGTCGGGCATGTCTCGTATCG
ATCAATGTCAGACTCTTGACCTTCGCGTTCTTCTCCTCCTCCCACCACAG
GATCCGCAGGTCAGACACGAGATAATCACGTCGAAGAGGGTAACGACACC
GTCGATGATGGCCTTGCAGACAGCACCGATTGTGTTGACGATGCCCATCA
GGCAAGCGCCGATGGCGTGGAAGATACTAGTGATCTATATATACATGTGT
TAGCCAATCACCAGTTCATTTGTTCATAATATAAAGCAAGAGAAGACGAT
AAAAGAAG back to topCoding sequence (CDS) from alignment at ch3:3471452..3473609+ >KJC3_003933-T2 ID=KJC3_003933-T2|Name=KJC3_003933-T2|organism=Aspergillus niger KJC3|type=CDS|length=1932bp|location=Sequence derived from alignment at ch3:3471452..3473609+ (Aspergillus niger KJC3)
ATGCCTAACGTCTCGCAGCCGGCCCTTGCCGGATTATCAGCACTCGAAAG
ACTACCGGTGGAAATCATCCAAGAAATCTTCCTCCACTGTCTCGAAGTTA
ATCTCCCGCGAGCCTCCATACACATCTCCCGGGCTCTTTCCAACACAGTC
CTGTACACATGGGTCACTCGCTATGTCTTCAGCAGCACCAACGAAAGCTC
AAGACAAGACTTCTTCACGCCTGATTTTCTTCCCTGGCCTCTTGATGTTT
TTGCACTCTCTCCCAATGAAAGGAGAGACCTGCAAAACGTCATCCTCAGT
TGTCGCTGGTGTACACTACCTTTGATCCGCAAATGCCAGAGGGAATACAT
AGAGCATACGATCCGCCGCAAATGTCTGCAGCTAGACTTATCACCTGGAG
ACCGCCAGGTCCTCATCAATATTGGCGAGCAATTCGACAAAGATTTACCT
CTTATGCCTGATGAAACACCCCATGCTCATCGCGGAAAAGGCGACCTGAT
CCTCAAAGCCAAAATCCCAAAGTCAGATGTGGACTGCAAAGTTGCAGTGT
GGTTCAATGCTGGCGCGGTCCAGATCCGTCCATCCAGCGAGATATACCAG
GAGACTGACATCTTCCGCCTACCATGCTTCGCGGCCAATCTACCAGTTCG
GGTCCCGGACAAGCTACTTTTTCCTCCATGGACTGAATCTAAGCTGGACT
TCCTCGAGTTGCTCTCGATGGACGGCTATCTTGACGAGGATCCCGAGCAT
CCGCGGGCGAAGCGGATCCTTCGACAGACGATTCGAGACCGTGACCTCGC
AACGTTTAAGCGATTGCTGAGCATGCGTATTCGTGTGCCGTGGTACAAGT
ACCCCATTCGGTGGCCGGTTCTTCCAAATCACTTCTACGTGGCTTTGAAG
TATGCGGATGAGGTGAAGGACCCTTTCGTCAGGTTGCTGGCATCTCGGGA
TAAGTTGCCAGGATGAATGCCTAACGTCTCGCAGCCGGCCCTTGCCGGAT
TATCAGCACTCGAAAGACTACCGGTGGAAATCATCCAAGAAATCTTCCTC
CACTGTCTCGAAGTTAATCTCCCGCGAGCCTCCATACACATCTCCCGGGC
TCTTTCCAACACAGTCCTGTACACATGGGTCACTCGCTATGTCTTCAGCA
GCACCAACGAAAGCTCAAGACAAGACTTCTTCACGCCTGATTTTCTTCCC
TGGCCTCTTGATGTTTTTGCACTCTCTCCCAATGAAAGGAGAGACCTGCA
AAACGTCATCCTCAGTTGTCGCTGGTGTACACTACCTTTGATCCGCAAAT
GCCAGAGGGAATACATAGAGCATACGATCCGCCGCAAATGTCTGCAGCTA
GACTTATCACCTGGAGACCGCCAGGTCCTCATCAATATTGGCGAGCAATT
CGACAAAGATTTACCTCTTATGCCTGATGAAACACCCCATGCTCATCGCG
GAAAAGGCGACCTGATCCTCAAAGCCAAAATCCCAAAGTCAGATGTGGAC
TGCAAAGTTGCAGTGTGGTTCAATGCTGGCGCGGTCCAGATCCGTCCATC
CAGCGAGATATACCAGGAGACTGACATCTTCCGCCTACCATGCTTCGCGG
CCAATCTACCAGTTCGGGTCCCGGACAAGCTACTTTTTCCTCCATGGACT
GAATCTAAGCTGGACTTCCTCGAGTTGCTCTCGATGGACGGCTATCTTGA
CGAGGATCCCGAGCATCCGCGGGCGAAGCGGATCCTTCGACAGACGATTC
GAGACCGTGACCTCGCAACGTTTAAGCGATTGCTGAGCATGCGTATTCGT
GTGCCGTGGTACAAGTACCCCATTCGGTGGCCGGTTCTTCCAAATCACTT
CTACGTGGCTTTGAAGTATGCGGATGAGGTGAAGGACCCTTTCGTCAGGT
TGCTGGCATCTCGGGATAAGTTGCCAGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003933-T2.utr5p1 | KJC3_003933-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003933-T2.utr3p1 | KJC3_003933-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3471452..3473609 + |
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