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KJC3_003960-T1, KJC3_003960-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003960-T1
Unique NameKJC3_003960-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3536467..3537613+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003960-T1 ID=KJC3_003960-T1|Name=KJC3_003960-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1147bp|location=Sequence derived from alignment at ch3:3536467..3537613+ (Aspergillus niger KJC3)
ATGGCGTCCTCCTCTCGTTATCAGTTGGCTGACATTCTGAAAATTAATCC
TGCAGCTGATCACCACTGTCTCGGTCTCTCGCACTCTTACAACCGTCGCT
GCAACAATCTGATCAGCTATCAGAAGCGTCAGAAAGCTCACTCCCTGATC
GAACGAGGCTCCCGCGTATTTGCAGCTACCTCTTCTATATCCGCTGTCGA
TCCGCTTCTTGTCGACATCGCCAGCCTCCTTCTCTGCCCCAACCAGCACC
GATACCAATTCTTGACCCTGGTCGCCCAGTGGGAAGCGAAACTGCAGCGA
TATCTAGCTGAGCAGCGATCCGGCGCTCCCATCGCAGTCATGTCAAACAG
CTACTTTCACATGCCCCCAAACCCCACCATCATGGCTACGGGTAGTGGGA
TTGCAGTCACCAACCTGACAACCACCCACCATGGGCCCGGCTCATCGAGC
AGAATCACCATCCAGCATGGCATGGTCGGGATGGGTGCAAACCATCATCA
CCACGTGCAGAGCCCAAGACCCCGAGTCGAGATCATCCGTCCCGCGGGCG
ACCCTGTTGCTGCTACCACCTCGATGTCAGCTTCAGCTTCCAGCAGTGCT
TCCCCTTCTCCGCACGCCAATTCTGCATTCCATCACCGTCCCCACACCCC
GGCTGTCCAGCTTGTCAGCAGCACCTTGATCGCTTCGGGCCATACTCACC
CCGCCCATCAAGGAAGTCCGAGACCACTTCCGTCTGGACCAAACACTATA
TCTATGTACTGCGACTCACCTACCGCCCCAAAGCATCATCGCGTCAAGCC
TCGCCCTGTGGATGGCGACTGCGGAATTTGTCTTCTCCCGTATCTGGATG
AGAGTATGCGCTGCGACATGTCCGACGATGGGCGAACGGACGACGATGAG
GATGACGAATGGGAGGAACTGGACGGTAAGCTCCTTTGACTTCACTAACT
CTATACTTGAACGGTGCTAACGTACTGTGAATGTAGACGAAGAACTTGCC
GGCCCGGACTACGATCACGGCCTTCTGGTCTGGTGCCGGGGATCCTGCGG
GACCAACTACCACCGGGCATGCTTGGAGCAGTGGCTCGACACCTTTGACA
CCCTGGAGCCCACGTGCCCGACCTGCCGCAACTACTGGATTCTTTAG
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Coding sequence (CDS) from alignment at ch3:3536467..3537613+

>KJC3_003960-T1 ID=KJC3_003960-T1|Name=KJC3_003960-T1|organism=Aspergillus niger KJC3|type=CDS|length=2172bp|location=Sequence derived from alignment at ch3:3536467..3537613+ (Aspergillus niger KJC3)
ATGGCGTCCTCCTCTCGTTATCAGTTGGCTGACATTCTGAAAATTAATCC
TGCAGCTGATCACCACTGTCTCGGTCTCTCGCACTCTTACAACCGTCGCT
GCAACAATCTGATCAGCTATCAGAAGCGTCAGAAAGCTCACTCCCTGATC
GAACGAGGCTCCCGCGTATTTGCAGCTACCTCTTCTATATCCGCTGTCGA
TCCGCTTCTTGTCGACATCGCCAGCCTCCTTCTCTGCCCCAACCAGCACC
GATACCAATTCTTGACCCTGGTCGCCCAGTGGGAAGCGAAACTGCAGCGA
TATCTAGCTGAGCAGCGATCCGGCGCTCCCATCGCAGTCATGTCAAACAG
CTACTTTCACATGCCCCCAAACCCCACCATCATGGCTACGGGTAGTGGGA
TTGCAGTCACCAACCTGACAACCACCCACCATGGGCCCGGCTCATCGAGC
AGAATCACCATCCAGCATGGCATGGTCGGGATGGGTGCAAACCATCATCA
CCACGTGCAGAGCCCAAGACCCCGAGTCGAGATCATCCGTCCCGCGGGCG
ACCCTGTTGCTGCTACCACCTCGATGTCAGCTTCAGCTTCCAGCAGTGCT
TCCCCTTCTCCGCACGCCAATTCTGCATTCCATCACCGTCCCCACACCCC
GGCTGTCCAGCTTGTCAGCAGCACCTTGATCGCTTCGGGCCATACTCACC
CCGCCCATCAAGGAAGTCCGAGACCACTTCCGTCTGGACCAAACACTATA
TCTATGTACTGCGACTCACCTACCGCCCCAAAGCATCATCGCGTCAAGCC
TCGCCCTGTGGATGGCGACTGCGGAATTTGTCTTCTCCCGTATCTGGATG
AGAGTATGCGCTGCGACATGTCCGACGATGGGCGAACGGACGACGATGAG
GATGACGAATGGGAGGAACTGGACGACGAAGAACTTGCCGGCCCGGACTA
CGATCACGGCCTTCTGGTCTGGTGCCGGGGATCCTGCGGGACCAACTACC
ACCGGGCATGCTTGGAGCAGTGGCTCGACACCTTTGACACCCTGGAGCCC
ACGTGCCCGACCTGCCGCAACTACTGGATTCTTTAGATGGCGTCCTCCTC
TCGTTATCAGTTGGCTGACATTCTGAAAATTAATCCTGCAGCTGATCACC
ACTGTCTCGGTCTCTCGCACTCTTACAACCGTCGCTGCAACAATCTGATC
AGCTATCAGAAGCGTCAGAAAGCTCACTCCCTGATCGAACGAGGCTCCCG
CGTATTTGCAGCTACCTCTTCTATATCCGCTGTCGATCCGCTTCTTGTCG
ACATCGCCAGCCTCCTTCTCTGCCCCAACCAGCACCGATACCAATTCTTG
ACCCTGGTCGCCCAGTGGGAAGCGAAACTGCAGCGATATCTAGCTGAGCA
GCGATCCGGCGCTCCCATCGCAGTCATGTCAAACAGCTACTTTCACATGC
CCCCAAACCCCACCATCATGGCTACGGGTAGTGGGATTGCAGTCACCAAC
CTGACAACCACCCACCATGGGCCCGGCTCATCGAGCAGAATCACCATCCA
GCATGGCATGGTCGGGATGGGTGCAAACCATCATCACCACGTGCAGAGCC
CAAGACCCCGAGTCGAGATCATCCGTCCCGCGGGCGACCCTGTTGCTGCT
ACCACCTCGATGTCAGCTTCAGCTTCCAGCAGTGCTTCCCCTTCTCCGCA
CGCCAATTCTGCATTCCATCACCGTCCCCACACCCCGGCTGTCCAGCTTG
TCAGCAGCACCTTGATCGCTTCGGGCCATACTCACCCCGCCCATCAAGGA
AGTCCGAGACCACTTCCGTCTGGACCAAACACTATATCTATGTACTGCGA
CTCACCTACCGCCCCAAAGCATCATCGCGTCAAGCCTCGCCCTGTGGATG
GCGACTGCGGAATTTGTCTTCTCCCGTATCTGGATGAGAGTATGCGCTGC
GACATGTCCGACGATGGGCGAACGGACGACGATGAGGATGACGAATGGGA
GGAACTGGACGACGAAGAACTTGCCGGCCCGGACTACGATCACGGCCTTC
TGGTCTGGTGCCGGGGATCCTGCGGGACCAACTACCACCGGGCATGCTTG
GAGCAGTGGCTCGACACCTTTGACACCCTGGAGCCCACGTGCCCGACCTG
CCGCAACTACTGGATTCTTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003960KJC3_003960Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003960-T1.exon1KJC3_003960-T1.exon1Aspergillus niger KJC3exon
KJC3_003960-T1.exon2KJC3_003960-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003960-T1.cdsKJC3_003960-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003960-T1KJC3_003960-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3536467..3537613 +
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