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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3543969..3545378+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003963-T1 ID=KJC3_003963-T1|Name=KJC3_003963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1410bp|location=Sequence derived from alignment at ch3:3543969..3545378+ (Aspergillus niger KJC3)
AATCATCTCCCCTCTCCTCTCTCCATCTTCCCCAGTCATTCTCTCCATCT
TACCACCACACCACACCACATACTACTCCCGCATCTACACATCTATACAC
AACACACACACCAACAAAGACAAAAAAAAGAGTAAACAATGTCTCTCCGT
ACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCACCGTGCAATCCAC
TTCCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCACCTGCTCTGCGTG
AAGCCACTGCCGCCACGGCACCACGCACCAACTGGACCCGCGAAGAGATT
CAACAGATTTACGAGACGCCCTTGAACCAGCTTACCTATGCCGCTGTACG
TCCATACCCTTTCCCCCTTCAACCCCCACCAAATCACACAATATCGTAAC
ACTCACTAACGATACTCTAAATATAGGCAGCAGTCCACCGCCGCTTCCAC
GACCCCAGCGCCATCCAAATGTGCACACTAATGAACATCAAAACGGGCGG
CTGCAGCGAAGACTGCTCCTACTGCGCACAATCCTCCCGCTACCAAACGG
GCCTAAAAGCCACCAAGATGTCCCCAGTCGACGAAGTCCTCGAAGCCGCC
CGCATTGCCAAATCCAACGGCAGCACACGGTTCTGCATGGGCGCCGCGTG
GCGCGACATGCGCGGCCGCAAGACCAGCCTCAAGAACATCAAATCCATGG
TCTCTGGAGTTCGGGGCATGGGGATGGAAGTCTGCGTTACACTCGGAATG
ATCGACGAAGCACAAGCCAAGGAACTCAAAGACGCGGGACTCACGGCGTA
CAACCATAACCTGGATACATCAAGGGAGTTTTACCCGGAGATTATCACGA
CGAGGTCGTATGATGAGAGATTGAAGACGTTGGAAAATGTGCGGGATGCC
GGGATCAATGTCTGCTCCGGTGGAATTTTGGGTCTGGGTGAGAAGGATGA
GGATCGCGTGGGGTTGATTTATACGATGTCGGGGTTGGAGAAGCATCCGG
AGAGTTTCCCGGTTAATGCTCTTGTGCCGATTCCCGGAACGCCGCTTGGC
GAGAGGAAGATGATTTCGTTTGATAAGATTCTTAGGACGGTTGCTACCGC
GAGAGTGGTCATGCCGGCTACGATTGTGAGACTTGCTGCGGGCAGAATTT
CGTTGAGTGAGGAGCAGCAGGTTGCTTGTTTTATGGCGGGAGCTAATGCT
GTTTTTACGGGTGAGAAGATGCTTACGACGGAGTGTAATGGATGGGATGA
GGATAGGGCCATGTTTGAGAAGTGGGGTTTCTATCCCATGAAGAGCTTTG
AGGGGGAGCATGTTAAGGATGAGGTCAAGGTCAAGGAGGTCGAGGGGACT
GCGCAGGCCGCGGTTAGTGCGTAAGTAGATAGATGAATTAAGATGATTAT
ATTGGTTCAA back to topCoding sequence (CDS) from alignment at ch3:3543969..3545378+ >KJC3_003963-T1 ID=KJC3_003963-T1|Name=KJC3_003963-T1|organism=Aspergillus niger KJC3|type=CDS|length=2310bp|location=Sequence derived from alignment at ch3:3543969..3545378+ (Aspergillus niger KJC3)
ATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCAC
CGTGCAATCCACTTCCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCAC
CTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACTGGACC
CGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAGCTTACCTA
TGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCATCCAAA
TGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACTGCTCC
TACTGCGCACAATCCTCCCGCTACCAAACGGGCCTAAAAGCCACCAAGAT
GTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATCCAACG
GCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCGGCCGC
AAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGGGGCAT
GGGGATGGAAGTCTGCGTTACACTCGGAATGATCGACGAAGCACAAGCCA
AGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGGATACA
TCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTATGATGAGAG
ATTGAAGACGTTGGAAAATGTGCGGGATGCCGGGATCAATGTCTGCTCCG
GTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGATCGCGTGGGGTTGATT
TATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTTAATGC
TCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGATTTCGT
TTGATAAGATTCTTAGGACGGTTGCTACCGCGAGAGTGGTCATGCCGGCT
ACGATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAGCAGCA
GGTTGCTTGTTTTATGGCGGGAGCTAATGCTGTTTTTACGGGTGAGAAGA
TGCTTACGACGGAGTGTAATGGATGGGATGAGGATAGGGCCATGTTTGAG
AAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTTAAGGA
TGAGGTCAAGGTCAAGGAGGTCGAGGGGACTGCGCAGGCCGCGGTTAGTG
CGTAAATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTAC
GGCACCGTGCAATCCACTTCCCCCAGTGCCGCCGCCATCGCCAGCCGTAT
CCCACCTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACT
GGACCCGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAGCTT
ACCTATGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCAT
CCAAATGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACT
GCTCCTACTGCGCACAATCCTCCCGCTACCAAACGGGCCTAAAAGCCACC
AAGATGTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATC
CAACGGCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCG
GCCGCAAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGG
GGCATGGGGATGGAAGTCTGCGTTACACTCGGAATGATCGACGAAGCACA
AGCCAAGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGG
ATACATCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTATGAT
GAGAGATTGAAGACGTTGGAAAATGTGCGGGATGCCGGGATCAATGTCTG
CTCCGGTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGATCGCGTGGGGT
TGATTTATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTT
AATGCTCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGAT
TTCGTTTGATAAGATTCTTAGGACGGTTGCTACCGCGAGAGTGGTCATGC
CGGCTACGATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAG
CAGCAGGTTGCTTGTTTTATGGCGGGAGCTAATGCTGTTTTTACGGGTGA
GAAGATGCTTACGACGGAGTGTAATGGATGGGATGAGGATAGGGCCATGT
TTGAGAAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTT
AAGGATGAGGTCAAGGTCAAGGAGGTCGAGGGGACTGCGCAGGCCGCGGT
TAGTGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009102 | biotin biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004076 | biotin synthase activity |
| GO:0051536 | iron-sulfur cluster binding |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003963-T1.utr5p1 | KJC3_003963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003963-T1.utr3p1 | KJC3_003963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR024177 |
| DBxref | InterPro:IPR002684 |
| DBxref | InterPro:IPR007197 |
| DBxref | InterPro:IPR010722 |
| DBxref | InterPro:IPR006638 |
| DBxref | PFAM:PF04055 |
| DBxref | PFAM:PF06968 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3543969..3545378 + |
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