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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3586103..3588284+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003978-T2 ID=KJC3_003978-T2|Name=KJC3_003978-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2182bp|location=Sequence derived from alignment at ch3:3586103..3588284+ (Aspergillus niger KJC3)
CTTCCCTTTTCGATATACTCCTATCAGCGCGGTAAGTACTAGTCTATGTG
GAGTATAAGCCGAAAAGACTAATATAGCGTTATACTAAGTTACCTAATAT
TCACTAGACTGGACGAACCAGCCATCGTCGGGTAGTTTACTACTCCACTT
GAAGCTGGCTGTGCTTCTAGGCATGAATTGAAGAGCTGACACTATTAGGC
AATGCGATAATATCATTTCACATGCAGTGGGGTCTGTACAAAAACAATTC
GGATACGCGATCCGTCATGTCAGCCCGGAGCCTCGTTGTTGCAAGGCAGA
TTTAGCAAGCTATCCGTTCATCAGCTGCTCAAACTTGCGCCGCATTCTCA
GTAAGTCGCCAAGCTCCCTGCAAGCCCAGAATCAGCTCTGAACACTGTCT
ACCCAAATATATCCTGCATATTAGTAGAACACCATCCATGTCAATTGACA
CTAGGAATAATCTCGTGTCAGTAACGAGGATTAATAACCTATCATAGATT
TCACCACAAAATGACATCGTCACAACCGCCTTTGAACATTGTTGTAGTAA
GCTTTACCTACGCTTCCAGTTACACGGAACCAAGGCATCGTTGACAACTC
ATGTTTCGCAGATCGGAGGCTCTCTGGCGGGGCTAATGACCGCCGTGGCG
CTGAAGCAAAACGGTCATAATGTGACAGTCATTGAAAAGGAAGACAATGA
ACGCGAAAGCCACATGGCTGGCGTTTGTCTAGGACTCGATGCTGTGGAAT
TTCTCGAAAAATACGATCGCATTCAGGGCATCTTCTCCCACCAGTCGCGT
CGTATTCAGGCCCTTGTGGGCGACGACAAGCTGAAGACCTTTGTCAATGG
CCGTCGAGAAATCACAAACTGGGATACCATGTACTACCGGCTTCGTTGTA
ACTTTGATGGCTATGCAAGCGATACCTACCCTACATCCCCTTTGCCCTCT
CCAGAAGATGGCCAGGGTGTGTATCTTGCTCAAACGGAGGTTCTCGATAT
TCAACGTGAAATACAACCTGACGACGACGATGACAGCGACGAGAAGAAGA
CGACAATGAGCCTCACGTTGCTGGACCGCAAATCAGGAGACAAGGCCACT
ATGCAGGCCGACCTGGTGATTGGTGCAGACGGCCCGGATTCTTTTGTGCG
GAAGAAGTACCAAGGCCACGTTGAGCGGAAATACGTTGGCTACATTGCTT
GGAGGGGCACTGTCCCGGAGAGTGAGGTGTCGGAAGAAACCCGTCACCTC
TTCAGACGCAGCGTCACTGTGTATATGATGGACAAACAGCACTGCATCGT
GTACACCATCCCCGGCAAGAACGGATCGCTGGAGCCCGGCGAAAGGTATC
TCAACTTCCTCTGGTACACAAACGAGACGAAGGAATCCTTGGACGAAATC
TTAAAGGACGGCCTCGACGGCCATCGCCATCACAACATTGTCCCGTCCGG
TCGTGTGCGACAAGATATCTGGGCTGAACGAACAAGGCAAGCCAAAGCCC
TGCCACTCAGCAAGCCAATGCTGGAGATCTTTCTGAAGATCCAGCGTCCT
TTTATTCAGGTCATTACCGACTTCTGCTCACATCAGGCAGCCTTTGAAGA
TGGCAAGGTCCTGCTGGTTGGCGACGGACTGTCGCTGTTCCGTCCGCACA
CAGCCTTCAGCGGCACCCAGGCGGCGTTTCATGCCCTCCGCACGGCTGAG
TTCGTCAATGGCAAGACAACCCTGCAACAGTGGGAGAGCAAGGTCCTTAG
GTACTCGCGGCTGCACTACCTGCAGAGCAACTGGTATGGAGACTTCTACC
AATACCCCATCTCGACGGCCCTCGTGGCTGCTGTGCGCTACTGGATTATG
TGCGGCGTGGATCGCGTCTTGTCCTGGTACAACGGCGATGCTCCGCTCTT
GCGCACAAGCACATTCAAGAGTGAAGCGTACGACGACGAATAAAGTAGGC
CGAGGAATAGCCTCATTCGATTAGGGAGGTGTCGTTCCACCCCATACTGG
ACGTCTACAGTAACTAGGAGGTCAAGTAGGTGGGATGAGTATCTCAACGG
AAATTGTGAAGTTGACACAGGCATAGGCTACTAGCAAAAGGGACATTGAC
ATAATAGCCAATAACCTCATGTTTAGTTAGCTTCGATTGTATATAACCAT
ATATTAATCAGCAATACTTTCTACAATTCGAG back to topCoding sequence (CDS) from alignment at ch3:3586103..3588284+ >KJC3_003978-T2 ID=KJC3_003978-T2|Name=KJC3_003978-T2|organism=Aspergillus niger KJC3|type=CDS|length=1308bp|location=Sequence derived from alignment at ch3:3586103..3588284+ (Aspergillus niger KJC3)
ATGACCGCCGTGGCGCTGAAGCAAAACGGTCATAATGTGACAGTCATTGA
AAAGGAAGACAATGAACGCGAAAGCCACATGGCTGGCGTTTGTCTAGGAC
TCGATGCTGTGGAATTTCTCGAAAAATACGATCGCATTCAGGGCATCTTC
TCCCACCAGTCGCGTCGTATTCAGGCCCTTGTGGGCGACGACAAGCTGAA
GACCTTTGTCAATGGCCGTCGAGAAATCACAAACTGGGATACCATGTACT
ACCGGCTTCGTTGTAACTTTGATGGCTATGCAAGCGATACCTACCCTACA
TCCCCTTTGCCCTCTCCAGAAGATGGCCAGGGTGTGTATCTTGCTCAAAC
GGAGGTTCTCGATATTCAACGTGAAATACAACCTGACGACGACGATGACA
GCGACGAGAAGAAGACGACAATGAGCCTCACGTTGCTGGACCGCAAATCA
GGAGACAAGGCCACTATGCAGGCCGACCTGGTGATTGGTGCAGACGGCCC
GGATTCTTTTGTGCGGAAGAAGTACCAAGGCCACGTTGAGCGGAAATACG
TTGGCTACATTGCTTGGAGGGGCACTGTCCCGGAGAGTGAGGTGTCGGAA
GAAACCCGTCACCTCTTCAGACGCAGCGTCACTGTGTATATGATGGACAA
ACAGCACTGCATCGTGTACACCATCCCCGGCAAGAACGGATCGCTGGAGC
CCGGCGAAAGGTATCTCAACTTCCTCTGGTACACAAACGAGACGAAGGAA
TCCTTGGACGAAATCTTAAAGGACGGCCTCGACGGCCATCGCCATCACAA
CATTGTCCCGTCCGGTCGTGTGCGACAAGATATCTGGGCTGAACGAACAA
GGCAAGCCAAAGCCCTGCCACTCAGCAAGCCAATGCTGGAGATCTTTCTG
AAGATCCAGCGTCCTTTTATTCAGGTCATTACCGACTTCTGCTCACATCA
GGCAGCCTTTGAAGATGGCAAGGTCCTGCTGGTTGGCGACGGACTGTCGC
TGTTCCGTCCGCACACAGCCTTCAGCGGCACCCAGGCGGCGTTTCATGCC
CTCCGCACGGCTGAGTTCGTCAATGGCAAGACAACCCTGCAACAGTGGGA
GAGCAAGGTCCTTAGGTACTCGCGGCTGCACTACCTGCAGAGCAACTGGT
ATGGAGACTTCTACCAATACCCCATCTCGACGGCCCTCGTGGCTGCTGTG
CGCTACTGGATTATGTGCGGCGTGGATCGCGTCTTGTCCTGGTACAACGG
CGATGCTCCGCTCTTGCGCACAAGCACATTCAAGAGTGAAGCGTACGACG
ACGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003978-T2.utr3p1 | KJC3_003978-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.6 |
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3586103..3588284 + |
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