|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3613941..3615389- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003988-T1 ID=KJC3_003988-T1|Name=KJC3_003988-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1449bp|location=Sequence derived from alignment at ch3:3613941..3615389- (Aspergillus niger KJC3)
TTCTGCTTATGCCGTGAGATGGCAGTATTTATGCATATATTATGTAATCA
ACGCTAGTCCCGATCAGCTCAACCGGCCGGACTTCTTCCCAAGTATTAAC
CTTCTTTCTTTGCTCCTTCAGAGCAGCAGTCTTAAGATGGCGTATTTCAG
ATCTTCTGCATTCAAGTCCCTGTTGAGGACTCGGGCATCCTCCCTGTGCC
CCCAGCAAAGGCGCTGGGCCCAAGTGCACGATGTCCGCTTCCTCGCCACA
CACCACGATCCCAACCAAGTGCTGGACAGGTACCGCTCGAAACTCAAGCA
GAAAGCCCAAGCGTAAGTCGACCGCGACAGTAGTCATGACCGACTCACTC
ACTTGTCTCACAATAGGGAGGGACACGGAGACATCGATTCTCTGAAGGAA
GCCTACAAGGAGAAGATCGAAGAGTACCGTCACAAAGCAACAACTCCTCT
TACTCCGGAGCCGCCCAAGTCCTCGCCCTCCCCGTCCAAGACCGGCCCTT
CACCCCCTCCTCCTCCACCTACTCCCCAGGCTCGCGCCGCCTCCTCCGCC
ACATCGACTGGAATCAGACCTCTTGACTCGTTCATCGACGTCGAGAAAGT
GCGCAGCCTTCCGCCAAAGGAAATCGAGGCCATCTGGCGTCTTCGTTTCG
CCAATAACTCTCATTCGGTCTGCGCCGCAATTCCGGTAGAAACATACCAG
CGCATCGTCTCCGCCGCACGCAAGAACCCGCAATTCGTTCTTCCACTACC
CCGTACGCAGAGTGAGGCGCAGACTGCGGAGGAGAACGCAGAAGCTGCCA
AGGGCGGCGCGGACATCCATTTCCTCCAATGGGGTTTCCATCCCCCAGCG
TCCCCGACCGCTTCTTCCGCTGGTTCGGTCAACGACCACACTTCCACGAT
TATCTTCACAGCGTTGGCTTCATATCAGCTGCATGGCTCGTATGCACAGC
CGCATACGACGATCACGCATTATCTGGATCTGGCGGATGAGAAAGGTCTG
GTTCTGATGAATGGTCAGGTGATGCCTGATTCCGGAGTATCTGCTACAGA
TGCCACCTGGTTGGTTAGCTGTGTTCAGCGGTTCTATGACTTTGGCGGCC
AGGCCAACGGTCGGAAAGGCGAGCTTCTGCAGGCGTTCACTCGCGGTGAC
GTGCAGAACTTCAAGGTTGAGGACTTGATGGCAGAGGCAGAGAAGTTGTA
GGATTTCCAATAATCTGTAGATAGTTAGATTGTACGATATATGTCTTCTT
TCATATGCAGCCTTCTCTGCACGCGTATCCAGCTTGTAATCAGTTCCGCA
GTTGTTGAGTGTCCGGGACCAGGCTAGTCATGTCCCACACCATTCCTGGA
GACAGTGAGGGCCATGATAAAGCAGCTGATGTGAGGGTGACTGGCTGTCG
ACTGCTCTCCAACCAATCAGACTTACTCCCGGCGGTGGCTTGTTCTTCC back to topCoding sequence (CDS) from alignment at ch3:3613941..3615389- >KJC3_003988-T1 ID=KJC3_003988-T1|Name=KJC3_003988-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch3:3613941..3615389- (Aspergillus niger KJC3)
GGAGGGACACGGAGACATCGATTCTCTGAAGGAAGCCTACAAGGAGAAGA
TCGAAGAGTACCGTCACAAAGCAACAACTCCTCTTACTCCGGAGCCGCCC
AAGTCCTCGCCCTCCCCGTCCAAGACCGGCCCTTCACCCCCTCCTCCTCC
ACCTACTCCCCAGGCTCGCGCCGCCTCCTCCGCCACATCGACTGGAATCA
GACCTCTTGACTCGTTCATCGACGTCGAGAAAGTGCGCAGCCTTCCGCCA
AAGGAAATCGAGGCCATCTGGCGTCTTCGTTTCGCCAATAACTCTCATTC
GGTCTGCGCCGCAATTCCGGTAGAAACATACCAGCGCATCGTCTCCGCCG
CACGCAAGAACCCGCAATTCGTTCTTCCACTACCCCGTACGCAGAGTGAG
GCGCAGACTGCGGAGGAGAACGCAGAAGCTGCCAAGGGCGGCGCGGACAT
CCATTTCCTCCAATGGGGTTTCCATCCCCCAGCGTCCCCGACCGCTTCTT
CCGCTGGTTCGGTCAACGACCACACTTCCACGATTATCTTCACAGCGTTG
GCTTCATATCAGCTGCATGGCTCGTATGCACAGCCGCATACGACGATCAC
GCATTATCTGGATCTGGCGGATGAGAAAGGTCTGGTTCTGATGAATGGTC
AGGTGATGCCTGATTCCGGAGTATCTGCTACAGATGCCACCTGGTTGGTT
AGCTGTGTTCAGCGGTTCTATGACTTTGGCGGCCAGGCCAACGGTCGGAA
AGGCGAGCTTCTGCAGGCGTTCACTCGCGGTGACGTGCAGAACTTCAAGG
TTGAGGACTTGATGGCAGAGGCAGAGAAGTTGTAGATGGCGTATTTCAGA
TCTTCTGCATTCAAGTCCCTGTTGAGGACTCGGGCATCCTCCCTGTGCCC
CCAGCAAAGGCGCTGGGCCCAAGTGCACGATGTCCGCTTCCTCGCCACAC
ACCACGATCCCAACCAAGTGCTGGACAGGTACCGCTCGAAACTCAAGCAG
AAAGCCCAAGCGGAGGGACACGGAGACATCGATTCTCTGAAGGAAGCCTA
CAAGGAGAAGATCGAAGAGTACCGTCACAAAGCAACAACTCCTCTTACTC
CGGAGCCGCCCAAGTCCTCGCCCTCCCCGTCCAAGACCGGCCCTTCACCC
CCTCCTCCTCCACCTACTCCCCAGGCTCGCGCCGCCTCCTCCGCCACATC
GACTGGAATCAGACCTCTTGACTCGTTCATCGACGTCGAGAAAGTGCGCA
GCCTTCCGCCAAAGGAAATCGAGGCCATCTGGCGTCTTCGTTTCGCCAAT
AACTCTCATTCGGTCTGCGCCGCAATTCCGGTAGAAACATACCAGCGCAT
CGTCTCCGCCGCACGCAAGAACCCGCAATTCGTTCTTCCACTACCCCGTA
CGCAGAGTGAGGCGCAGACTGCGGAGGAGAACGCAGAAGCTGCCAAGGGC
GGCGCGGACATCCATTTCCTCCAATGGGGTTTCCATCCCCCAGCGTCCCC
GACCGCTTCTTCCGCTGGTTCGGTCAACGACCACACTTCCACGATTATCT
TCACAGCGTTGGCTTCATATCAGCTGCATGGCTCGTATGCACAGCCGCAT
ACGACGATCACGCATTATCTGGATCTGGCGGATGAGAAAGGTCTGGTTCT
GATGAATGGTCAGGTGATGCCTGATTCCGGAGTATCTGCTACAGATGCCA
CCTGGTTGGTTAGCTGTGTTCAGCGGTTCTATGACTTTGGCGGCCAGGCC
AACGGTCGGAAAGGCGAGCTTCTGCAGGCGTTCACTCGCGGTGACGTGCA
GAACTTCAAGGTTGAGGACTTGATGGCAGAGGCAGAGAAGTTGTAGATGG
CGTATTTCAGATCTTCTGCATTCAAGTCCCTGTTGAGGACTCGGGCATCC
TCCCTGTGCCCCCAGCAAAGGCGCTGGGCCCAAGTGCACGATGTCCGCTT
CCTCGCCACACACCACGATCCCAACCAAGTGCTGGACAGGTACCGCTCGA
AACTCAAGCAGAAAGCCCAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005739 | mitochondrion |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0065003 | protein-containing complex assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003988-T1.utr3p1 | KJC3_003988-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003988-T1.utr5p1 | KJC3_003988-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264BIX |
| DBxref | InterPro:IPR010591 |
| DBxref | PFAM:PF06644 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3613941..3615389 - |
|
