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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3672173..3673356- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004015-T1 ID=KJC3_004015-T1|Name=KJC3_004015-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1184bp|location=Sequence derived from alignment at ch3:3672173..3673356- (Aspergillus niger KJC3)
ATGACTGCACCCTGCATCGAGCATTGGGTGACCGCAGCTGCGCCAACCGA
AAGCAGCCTTGAGCATCTCCAACATCAATATGCTGGATACTGTCATGCAC
TCATGCCACACTTGGGCGATGCAAAGAAAATCCCAGTAACCCTCTATGAG
TTCCTCTCAGCGAAACCCAACACGTCCGAGTTCATCCGACTGGTAAACCA
AGTCCCTCAGATCAAGCATCTATTGCAAAACAAGACTATTCATCCACCGT
CTGGGTCCCAAGCAACACTGCACTTGAGCAACTGAGCAATGAGCTATCTG
AGGAAGATGCTCTGGCCTTCCTTCAAACGCACATCTCGCCATACTTCGGT
CCATTATACTTCCTTCTAACAGCCCCAACCGTCGACACGCTACTCCATCC
TGACCGATTGAACGGTTCCCAGAGAGTAACAGTCCGTCCTTCACTCAACG
GTCTTCGCGTGAACTCCCACGCAACCGTAATCGAACAAGACCATCTCGTG
GGAAACGGTATGGTCCATGTAATCGACCAAATTCTGCCATCGCGACCCAC
CATTGGAGCTTTCCTCGCTGCTCTGCCGTCATCCGGTTTTGACCTGTTCC
AGTCTATAGTGAAACAATCTGAAGCTATTCAGAATATTCTCCTGGAAGAG
TCTCGTCGCGGTGGAACCATATTCATTCCCACCAACGAAGCCTTTTGCAG
GCTGCCTGAGGACGTTCGGACATTTCTCTTCAGCGATGAAGGGGCCATTT
CTCTCCAAGCTCTTTTGAGGTATCATGTCATTGCGAATCAATCATTGTAC
TCGAATCGTCTTTATGACCAGAACTCTGCACCAGAGCATTTTGTACAGAC
GCCACAAGATACCCCTGATCATACGATTCCTACTCCAGAGACCCTGTCGG
ATCGGTTGTGGTGTGTGCTCAATGGAGTTCGTCGCTTTTCCTTGCCTACG
TGCTTGGATGGGCAGACGCTGGCAGTTGCTGTAACCCGATGTGGGGGCCT
TATCTCAATGAAGGTGAATGGAATTGCGAACGTGACTGTACAGGATGGTT
TAGCTAGTGATGGAGTGTGTCATGTTGTGGATTCGGTTTTGTTTCCACCT
CTACAGAACGAGGATGCAGAAGTTCAGCCAGTACTCTCTGTTGAAGATGT
AAAGTTGAGGTTGGGGGTAGTTTGCTTGTCGTAA back to topCoding sequence (CDS) from alignment at ch3:3672173..3673356- >KJC3_004015-T1 ID=KJC3_004015-T1|Name=KJC3_004015-T1|organism=Aspergillus niger KJC3|type=CDS|length=1806bp|location=Sequence derived from alignment at ch3:3672173..3673356- (Aspergillus niger KJC3)
CCCCAACCGTCGACACGCTACTCCATCCTGACCGATTGAACGGTTCCCAG
AGAGTAACAGTCCGTCCTTCACTCAACGGTCTTCGCGTGAACTCCCACGC
AACCGTAATCGAACAAGACCATCTCGTGGGAAACGGTATGGTCCATGTAA
TCGACCAAATTCTGCCATCGCGACCCACCATTGGAGCTTTCCTCGCTGCT
CTGCCGTCATCCGGTTTTGACCTGTTCCAGTCTATAGTGAAACAATCTGA
AGCTATTCAGAATATTCTCCTGGAAGAGTCTCGTCGCGGTGGAACCATAT
TCATTCCCACCAACGAAGCCTTTTGCAGGCTGCCTGAGGACGTTCGGACA
TTTCTCTTCAGCGATGAAGGGGCCATTTCTCTCCAAGCTCTTTTGAGGTA
TCATGTCATTGCGAATCAATCATTGTACTCGAATCGTCTTTATGACCAGA
ACTCTGCACCAGAGCATTTTGTACAGACGCCACAAGATACCCCTGATCAT
ACGATTCCTACTCCAGAGACCCTGTCGGATCGGTTGTGGTGTGTGCTCAA
TGGAGTTCGTCGCTTTTCCTTGCCTACGTGCTTGGATGGGCAGACGCTGG
CAGTTGCTGTAACCCGATGTGGGGGCCTTATCTCAATGAAGGTGAATGGA
ATTGCGAACGTGACTGTACAGGATGGTTTAGCTAGTGATGGAGTGTGTCA
TGTTGTGGATTCGGTTTTGTTTCCACCTCTACAGAACGAGGATGCAGAAG
TTCAGCCAGTACTCTCTGTTGAAGATGTAAAGTTGAGGTTGGGGGTAGTT
TGCTTGTCGTAAATGACTGCACCCTGCATCGAGCATTGGGTGACCGCAGC
TGCGCCAACCGAAAGCAGCCTTGAGCATCTCCAACATCAATATGCTGGAT
ACTCCCCAACCGTCGACACGCTACTCCATCCTGACCGATTGAACGGTTCC
CAGAGAGTAACAGTCCGTCCTTCACTCAACGGTCTTCGCGTGAACTCCCA
CGCAACCGTAATCGAACAAGACCATCTCGTGGGAAACGGTATGGTCCATG
TAATCGACCAAATTCTGCCATCGCGACCCACCATTGGAGCTTTCCTCGCT
GCTCTGCCGTCATCCGGTTTTGACCTGTTCCAGTCTATAGTGAAACAATC
TGAAGCTATTCAGAATATTCTCCTGGAAGAGTCTCGTCGCGGTGGAACCA
TATTCATTCCCACCAACGAAGCCTTTTGCAGGCTGCCTGAGGACGTTCGG
ACATTTCTCTTCAGCGATGAAGGGGCCATTTCTCTCCAAGCTCTTTTGAG
GTATCATGTCATTGCGAATCAATCATTGTACTCGAATCGTCTTTATGACC
AGAACTCTGCACCAGAGCATTTTGTACAGACGCCACAAGATACCCCTGAT
CATACGATTCCTACTCCAGAGACCCTGTCGGATCGGTTGTGGTGTGTGCT
CAATGGAGTTCGTCGCTTTTCCTTGCCTACGTGCTTGGATGGGCAGACGC
TGGCAGTTGCTGTAACCCGATGTGGGGGCCTTATCTCAATGAAGGTGAAT
GGAATTGCGAACGTGACTGTACAGGATGGTTTAGCTAGTGATGGAGTGTG
TCATGTTGTGGATTCGGTTTTGTTTCCACCTCTACAGAACGAGGATGCAG
AAGTTCAGCCAGTACTCTCTGTTGAAGATGTAAAGTTGAGGTTGGGGGTA
GTTTGCTTGTCGTAAATGACTGCACCCTGCATCGAGCATTGGGTGACCGC
AGCTGCGCCAACCGAAAGCAGCCTTGAGCATCTCCAACATCAATATGCTG
GATACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036378 |
| DBxref | InterPro:IPR000782 |
| DBxref | PFAM:PF02469 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3672173..3673356 - |
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