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KJC3_004024-T1, KJC3_004024-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004024-T1
Unique NameKJC3_004024-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3701054..3703852+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004024-T1 ID=KJC3_004024-T1|Name=KJC3_004024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2799bp|location=Sequence derived from alignment at ch3:3701054..3703852+ (Aspergillus niger KJC3)
GACCGCGCGGCACAAGCTATAGGTAGCATGTTAAGGAGGTTGTCAGGGAT
AGTAGTCAATATACTACATCTCATACAGAGACAGATCAGAATTCCCAAAT
ACAAAGTAGCAATATCTGGCATATCCTTAGCGTCAGCGTAGTGCATCGAC
TAGCAGAACTGGTCCGTTCCCTGGAAATCAACCAGGGAAATCCATCCATT
TGATCCTGATCGACAAGGCACTTTCCCACCCCAGAAGAAAGACATTATTC
GCGACAAAAATAGCGTTGCGTCAGCCCATCCAGCCAGAAGGCTGAAACAC
ACTTGAGACCCTCTTTTTTTTCCCTTTTGCTGGGGAAGCAGCAACAGCAG
CAAAGTAGCAAAGTAGCAGCGGCCCCTCTGGGGGGCTGCGTCATGCGCGG
CTGGCTTAGTTCTCACGGGCAAAATGAGTCCTTTTCGAGCAATGCCACGA
TTCCCTCTTCATTCCCTCTCGCTTGCTTGCTTGCTGGCTTGCTCGCTCTC
TCTCTCTCTCCCCTGCCTCGAAACTCCCTTTCGATCCCTTTTTCTCGTTC
CCTGAATCTCCCTCCCTCTTCGCCAATGACCGTCTCTCCATCCTAATTCC
AAATTCCCCGCCTGTCTGTCCCAATCTCCGCATTTCTCCCTTCCTCCCCA
TTCCCCCTCCCTCCACTGAGGGGCTCTCAATTGGCACGCCATGCAGTCCA
TGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGGCCGATGACAGCCAG
GTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGACAAAATCTTGGGACG
AGTAAGTATTTCTATATGTATATTTTTTTTTCTTTTCCCATCCACCATGC
TTTAGCGTGCACTTCCCTGCGGGGTGTGATTTGTTGATATCCTTCCGTAT
CTTGAACTGACAGCAACTCTTCCGCATTCCGACAGATCATCGATTCCACC
AGCGCATGGCGCGATGCTTGGTCGTCCCTCTTGACGCACCAAAATCGAAT
GCTGAGCGAATTCGAAGGTCTATATGCTCCCATTCTCGGTTCCTCCGACT
CTTCTGCGCCACAGCCTGCCCCAACTCCAGAGGCCACCTTGGCTCGGACC
AACAAGCTCCGCGAGCATTATGAAGACCTCCGAAAGGATCTACTGGGGGA
CCTGGCTGCTATCGATGATCGCATGATCCGACCAGCGTCGCAAGCTAGGG
AATTCATAAGCCCAGTCAAGAAAACCATCAAAAAGCGAGATGATCGAAAG
GTGCGCATTATCTCGCACGGGGACCTATAGTAACGCCGTTCCTGGCCTCC
CGCTCAGGAACCCGCCCATCAATGCAACCATCTCATGCTAATTCTATTCT
CATTCTAGTTGGACTTCGAGCGCTACCAAGGGCGCGTAGACAGCTATGCC
AAAAAGACAAAGCGATCAGACCGGGACAACGCAGCTCTTGCCAAGGCAGA
GAGTGACCTTGCCAAAGCAACCGAGGTACGAGCCCATTATTCGGGGCACA
TTTACCATCAGTCCATTTCTGTTTTCGTTTCTAACGGTCGCAGGACTACC
ACGCAGCGGATGACCACCTGCGAGAATGTCTACCACCTTTGATTGCCGCC
GCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATTGAGATCCAAAA
CACCATGCTAGCCAACTACTATACCGTAGTACACAACTACTGCCAGGAGA
CGCAATTCCCATCGCCTGCTCCTCCAATGGAGCAAGTCATCCAGGAATGG
GAACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCATTCGGCTGCAT
CGTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGAGGAATCACGAA
CCTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGATCCTCATTCTCC
CGTCGCCCTTCAAACAGCGAAACTCCTCCACCCAAGCCGCCACGGCCCAC
TTCACCTTCTGCCACAGCTACAGCTACAGCTACAGCTTTCAGCAACAAAA
AGCTCCCCCCACCACCCAAACCATCCTACGACACCAAACCATCTCCAGTC
TTCGAAACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAACCTCAC
CATCCCGTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCCAGGCA
CAGAGTCCTACTACTCAGCAACCGAGCACGCCCGCACCCCATCCCCGGGC
CCCTCATCCTCCGTCGCTGCCCGCGCCGACTATTTCAGCCGAATCCAGCC
TTCAGCAACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGTCAGTG
CCCTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGCGGGCT
AACTCGAGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGAGGTCA
AAGCGCGGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGTCCTGA
AGAAGACGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTGGGGTG
AAGGGGAGCTTTCCGGCTAATTATGTGGAGTGATTATTGTGATGTCAAAG
TATATAGCTGGGAGGAAGTGTTGTGTTGGTAAGCGTGAGGATGGAGATGG
ACAAAGAGGGGAAGAATGAAAGAGTTGCATGTATTCCATATATTCATTCA
TATTTAGTAGTAATATCTTGATATCATTTCCCCTGGTGGGGGAGCTCTAG
TGGTTAGAAAGTGAGGTGTAATGTGTATACTGTACTTGAATTGTTATTGT
GTCTTATTTGTCTTTAATTAGCAGGGGTCTCACACATGGGAGCGAGTGA
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Coding sequence (CDS) from alignment at ch3:3701054..3703852+

>KJC3_004024-T1 ID=KJC3_004024-T1|Name=KJC3_004024-T1|organism=Aspergillus niger KJC3|type=CDS|length=6132bp|location=Sequence derived from alignment at ch3:3701054..3703852+ (Aspergillus niger KJC3)
ATGCAGTCCATGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGGCCGA
TGACAGCCAGGTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGACAAAA
TCTTGGGACGAATCATCGATTCCACCAGCGCATGGCGCGATGCTTGGTCG
TCCCTCTTGACGCACCAAAATCGAATGCTGAGCGAATTCGAAGGTCTATA
TGCTCCCATTCTCGGTTCCTCCGACTCTTCTGCGCCACAGCCTGCCCCAA
CTCCAGAGGCCACCTTGGCTCGGACCAACAAGCTCCGCGAGCATTATGAA
GACCTCCGAAAGGATCTACTGGGGGACCTGGCTGCTATCGATGATCGCAT
GATCCGACCAGCGTCGCAAGCTAGGGAATTCATAAGCCCAGTCAAGAAAA
CCATCAAAAAGCGAGATGATCGAAAGTTGGACTTCGAGCGCTACCAAGGG
CGCGTAGACAGCTATGCCAAAAAGACAAAGCGATCAGACCGGGACAACGC
AGCTCTTGCCAAGGCAGAGAGTGACCTTGCCAAAGCAACCGAGGACTACC
ACGCAGCGGATGACCACCTGCGAGAATGTCTACCACCTTTGATTGCCGCC
GCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATTGAGATCCAAAA
CACCATGCTAGCCAACTACTATACCGTAGTACACAACTACTGCCAGGAGA
CGCAATTCCCATCGCCTGCTCCTCCAATGGAGCAAGTCATCCAGGAATGG
GAACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCATTCGGCTGCAT
CGTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGAGGAATCACGAA
CCTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGATCCTCATTCTCC
CGTCGCCCTTCAAACAGCGAAACTCCTCCACCCAAGCCGCCACGGCCCAC
TTCACCTTCTGCCACAGCTACAGCTACAGCTACAGCTTTCAGCAACAAAA
AGCTCCCCCCACCACCCAAACCATCCTACGACACCAAACCATCTCCAGTC
TTCGAAACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAACCTCAC
CATCCCGTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCCAGGCA
CAGAGTCCTACTACTCAGCAACCGAGCACGCCCGCACCCCATCCCCGGGC
CCCTCATCCTCCGTCGCTGCCCGCGCCGACTATTTCAGCCGAATCCAGCC
TTCAGCAACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGTCAGTG
CCCTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGCGGGCT
AACTCGAGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGAGGTCA
AAGCGCGGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGTCCTGA
AGAAGACGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTGGGGTG
AAGGGGAGCTTTCCGGCTAATTATGTGGAGTGAATGCAGTCCATGCAAAG
GCAGTTTGGCCGACTCATGAAAAGGTCGGCCGATGACAGCCAGGTGGCAA
TTCTCCTCAAGGATTTTGAAGAAGCAGACAAAATCTTGGGACGAATCATC
GATTCCACCAGCGCATGGCGCGATGCTTGGTCGTCCCTCTTGACGCACCA
AAATCGAATGCTGAGCGAATTCGAAGGTCTATATGCTCCCATTCTCGGTT
CCTCCGACTCTTCTGCGCCACAGCCTGCCCCAACTCCAGAGGCCACCTTG
GCTCGGACCAACAAGCTCCGCGAGCATTATGAAGACCTCCGAAAGGATCT
ACTGGGGGACCTGGCTGCTATCGATGATCGCATGATCCGACCAGCGTCGC
AAGCTAGGGAATTCATAAGCCCAGTCAAGAAAACCATCAAAAAGCGAGAT
GATCGAAAGTTGGACTTCGAGCGCTACCAAGGGCGCGTAGACAGCTATGC
CAAAAAGACAAAGCGATCAGACCGGGACAACGCAGCTCTTGCCAAGGCAG
AGAGTGACCTTGCCAAAGCAACCGAGGACTACCACGCAGCGGATGACCAC
CTGCGAGAATGTCTACCACCTTTGATTGCCGCCGCATTCTCGCTGCTCCC
TCGTCTGCTCGCCACGCAGATTGAGATCCAAAACACCATGCTAGCCAACT
ACTATACCGTAGTACACAACTACTGCCAGGAGACGCAATTCCCATCGCCT
GCTCCTCCAATGGAGCAAGTCATCCAGGAATGGGAACGCGACCACCTCCC
CGTCCAGCAAGAAGTAGAGGCATTCGGCTGCATCGTCAACGGCAAAACCG
TGAAAATGTCCCAAGTCCCCGAGGAATCACGAACCTCCCGCATCACCAGC
CGTCTCCCAGCAATCAACGGATCCTCATTCTCCCGTCGCCCTTCAAACAG
CGAAACTCCTCCACCCAAGCCGCCACGGCCCACTTCACCTTCTGCCACAG
CTACAGCTACAGCTACAGCTTTCAGCAACAAAAAGCTCCCCCCACCACCC
AAACCATCCTACGACACCAAACCATCTCCAGTCTTCGAAACGAAACCTCG
ATTAGCCTCTTCAGCTTCTAACAACAACCTCACCATCCCGTCCAACTACC
ATCTCTCCCCGCAACCATCCTCTTCCCCAGGCACAGAGTCCTACTACTCA
GCAACCGAGCACGCCCGCACCCCATCCCCGGGCCCCTCATCCTCCGTCGC
TGCCCGCGCCGACTATTTCAGCCGAATCCAGCCTTCAGCAACACCAGCCA
GCGCCATCAGAGCAACCTCCCCCGGCGTCAGTGCCCTAGTTGCCGGAAAG
AAGAAGCCCCCGCCGCCACCCCCACCGCGGGCTAACTCGAGCACTGCGCT
ATACGTGACGGCCCTGTATGACTTCGGAGGTCAAAGCGCGGGGGATCTGG
CTTTCCGGGAGGGAGATCGGATCCGTGTCCTGAAGAAGACGGATAGTACG
GATGATTGGTGGGAGGGGGAGTTACGTGGGGTGAAGGGGAGCTTTCCGGC
TAATTATGTGGAGTGAATGCAGTCCATGCAAAGGCAGTTTGGCCGACTCA
TGAAAAGGTCGGCCGATGACAGCCAGGTGGCAATTCTCCTCAAGGATTTT
GAAGAAGCAGACAAAATCTTGGGACGAATCATCGATTCCACCAGCGCATG
GCGCGATGCTTGGTCGTCCCTCTTGACGCACCAAAATCGAATGCTGAGCG
AATTCGAAGGTCTATATGCTCCCATTCTCGGTTCCTCCGACTCTTCTGCG
CCACAGCCTGCCCCAACTCCAGAGGCCACCTTGGCTCGGACCAACAAGCT
CCGCGAGCATTATGAAGACCTCCGAAAGGATCTACTGGGGGACCTGGCTG
CTATCGATGATCGCATGATCCGACCAGCGTCGCAAGCTAGGGAATTCATA
AGCCCAGTCAAGAAAACCATCAAAAAGCGAGATGATCGAAAGTTGGACTT
CGAGCGCTACCAAGGGCGCGTAGACAGCTATGCCAAAAAGACAAAGCGAT
CAGACCGGGACAACGCAGCTCTTGCCAAGGCAGAGAGTGACCTTGCCAAA
GCAACCGAGGACTACCACGCAGCGGATGACCACCTGCGAGAATGTCTACC
ACCTTTGATTGCCGCCGCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGC
AGATTGAGATCCAAAACACCATGCTAGCCAACTACTATACCGTAGTACAC
AACTACTGCCAGGAGACGCAATTCCCATCGCCTGCTCCTCCAATGGAGCA
AGTCATCCAGGAATGGGAACGCGACCACCTCCCCGTCCAGCAAGAAGTAG
AGGCATTCGGCTGCATCGTCAACGGCAAAACCGTGAAAATGTCCCAAGTC
CCCGAGGAATCACGAACCTCCCGCATCACCAGCCGTCTCCCAGCAATCAA
CGGATCCTCATTCTCCCGTCGCCCTTCAAACAGCGAAACTCCTCCACCCA
AGCCGCCACGGCCCACTTCACCTTCTGCCACAGCTACAGCTACAGCTACA
GCTTTCAGCAACAAAAAGCTCCCCCCACCACCCAAACCATCCTACGACAC
CAAACCATCTCCAGTCTTCGAAACGAAACCTCGATTAGCCTCTTCAGCTT
CTAACAACAACCTCACCATCCCGTCCAACTACCATCTCTCCCCGCAACCA
TCCTCTTCCCCAGGCACAGAGTCCTACTACTCAGCAACCGAGCACGCCCG
CACCCCATCCCCGGGCCCCTCATCCTCCGTCGCTGCCCGCGCCGACTATT
TCAGCCGAATCCAGCCTTCAGCAACACCAGCCAGCGCCATCAGAGCAACC
TCCCCCGGCGTCAGTGCCCTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCC
ACCCCCACCGCGGGCTAACTCGAGCACTGCGCTATACGTGACGGCCCTGT
ATGACTTCGGAGGTCAAAGCGCGGGGGATCTGGCTTTCCGGGAGGGAGAT
CGGATCCGTGTCCTGAAGAAGACGGATAGTACGGATGATTGGTGGGAGGG
GGAGTTACGTGGGGTGAAGGGGAGCTTTCCGGCTAATTATGTGGAGTGAA
TGCAGTCCATGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGGCCGAT
GACAGCCAGGTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGACAAAAT
CTTGGGACGAATCATCGATTCCACCAGCGCATGGCGCGATGCTTGGTCGT
CCCTCTTGACGCACCAAAATCGAATGCTGAGCGAATTCGAAGGTCTATAT
GCTCCCATTCTCGGTTCCTCCGACTCTTCTGCGCCACAGCCTGCCCCAAC
TCCAGAGGCCACCTTGGCTCGGACCAACAAGCTCCGCGAGCATTATGAAG
ACCTCCGAAAGGATCTACTGGGGGACCTGGCTGCTATCGATGATCGCATG
ATCCGACCAGCGTCGCAAGCTAGGGAATTCATAAGCCCAGTCAAGAAAAC
CATCAAAAAGCGAGATGATCGAAAGTTGGACTTCGAGCGCTACCAAGGGC
GCGTAGACAGCTATGCCAAAAAGACAAAGCGATCAGACCGGGACAACGCA
GCTCTTGCCAAGGCAGAGAGTGACCTTGCCAAAGCAACCGAGGACTACCA
CGCAGCGGATGACCACCTGCGAGAATGTCTACCACCTTTGATTGCCGCCG
CATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATTGAGATCCAAAAC
ACCATGCTAGCCAACTACTATACCGTAGTACACAACTACTGCCAGGAGAC
GCAATTCCCATCGCCTGCTCCTCCAATGGAGCAAGTCATCCAGGAATGGG
AACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCATTCGGCTGCATC
GTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGAGGAATCACGAAC
CTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGATCCTCATTCTCCC
GTCGCCCTTCAAACAGCGAAACTCCTCCACCCAAGCCGCCACGGCCCACT
TCACCTTCTGCCACAGCTACAGCTACAGCTACAGCTTTCAGCAACAAAAA
GCTCCCCCCACCACCCAAACCATCCTACGACACCAAACCATCTCCAGTCT
TCGAAACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAACCTCACC
ATCCCGTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCCAGGCAC
AGAGTCCTACTACTCAGCAACCGAGCACGCCCGCACCCCATCCCCGGGCC
CCTCATCCTCCGTCGCTGCCCGCGCCGACTATTTCAGCCGAATCCAGCCT
TCAGCAACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGTCAGTGC
CCTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGCGGGCTA
ACTCGAGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGAGGTCAA
AGCGCGGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGTCCTGAA
GAAGACGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTGGGGTGA
AGGGGAGCTTTCCGGCTAATTATGTGGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004024KJC3_004024Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004024-T1KJC3_004024-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004024-T1.utr5p1KJC3_004024-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004024-T1.exon1KJC3_004024-T1.exon1Aspergillus niger KJC3exon
KJC3_004024-T1.exon2KJC3_004024-T1.exon2Aspergillus niger KJC3exon
KJC3_004024-T1.exon3KJC3_004024-T1.exon3Aspergillus niger KJC3exon
KJC3_004024-T1.exon4KJC3_004024-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004024-T1.cdsKJC3_004024-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004024-T1.utr3p1KJC3_004024-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR004148
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
DBxrefPFAM:PF03114
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3701054..3703852 +
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