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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3800373..3802276+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004052-T1 ID=KJC3_004052-T1|Name=KJC3_004052-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1904bp|location=Sequence derived from alignment at ch3:3800373..3802276+ (Aspergillus niger KJC3)
CTGGCGTCCCACTTCTTCCCCAGCTCTCCTTCACCCCCCAACCCTGGAGT
CCTTGGATGCGGGCACCTTCAGGCTCTTCATAGCAGGTCTCCTCGCTGCT
AGTATCCGCCATGTCTCGTCTGTTGCGAACCGCCTTCCGCCTTCCCCGGG
CCTCATTCCCTCCGGCCTCCGTTCTCAGCCGTCGTGTCTATTCGTCCTCT
GTCGTTCGTCGCTCAGCAGCTAATGCTATCCCTCCCTCCAACAATGTGGC
TCCCACATCAAGTGATGCTGCTCCCACAGCTAGCAGTGTTGCCTCCGCAG
CCAGCATTGCGGCCGCCGAACCGAGTGCATCACATGAAATAGCAGATGCA
AGCAATGATCCTGCATCATCGCAGTCCAATCAATCCTCACCTCCGGAAGC
AGGTGATCAACACGACGATAAGACCCAGACAACGAGCGCCGGGACAGTGG
AATATCAGGATGGTAAATACACAATTAGACGCAAAGAAGGAGGCCTAGTC
ATCGAAGAAGGTCGCAAACGCCCCATTGAAATCCTAGACATCATCCTTCG
CGACTCCTGCAAATGCTCTTCCTGCGTGGACCCTCACTCCAAGCAACGCA
ATTTCCGCACGAGCGACATATCCTCCGACATCATCTCCGAGAACCCTACC
ATCAAGCACGGAAAGCTGCACGTAACATGGAAGAACGACTTCCGCGGCGC
TCCCGCCGAATCCGCACACGAGTCCACATACGATCTCCGCCAGCTCCGAC
ACCCCATCATCTCCCCCGTGGAAATGGAGTCCGCGGGCAAAAACCGCTGG
CGAGCATATTGGGACAACAGCCGCATGCAACACTGGCAGCACTGGATCAC
CTACGACCAGTTCATCAACAACGACATCTCCTTCGCGTGGTCCATGCGTA
CCCTCGCCGAACTCGGCCTCATCTTCATCAAAGACATCCCAGACTCGCGC
GAAATGGTCGAGAAGATCGCCACCCGCATGGGTCCCATCCGCGATACCTT
CTACGGCCGCACCTGGGACGTGCGCAGCATCCCCCAAGCCACCAACGTCG
CCTACACAGACCAGTTCCTCGGCTTCCACATGGACCTGATGTACATGAAC
GACCCACCCGGCTACCAGCTTCTGCACTGTCTCCAGAACTCCTGCGAGGG
AGGCGAATCCCTCTTCGTCGACACCTTCCGCGTAGCATACGACATGAAAC
AGGACGACCACAAAAACTACTCCCGTCTCCTTCATCATCACATCCCCTAC
CACTACAACCACCCGGACCACTTCTACACAAATTCTTGGCCCGTCTTCGA
AACAGAGACCTTTGATAACAGCGTCACGGAGGGAACTAATTTCTCTAAAT
CCCGTCTCGTTCACGTCAATTATTCGCCTCCGTTCCAGGCACCCAGGAAG
GTGCAGTCTCCTGTGCCCCGCAAGTTCCGCGAGAAGAATGAGGCTCTCGC
TAAGTTCGCTTCTCTGCTGGAGGACGAACGATATATGTTCGAGCTGAAGT
TGAACCCCGGTGAATGTGTTGTCTTCGAGAATCGCCGTGTGGCGCACGCG
CGTCGTGGGTTCAAGACTAGTACTGGTGAGAGGTGGCTGGCTGGTGCGTA
TGTGGATGAGGATGCTATGTTGTCTGGGTTTAAGACTTCGTCGAATAAGT
ATCCGAATTTGTGGAGGCTGAAGCGGAAGGGACTGAATAGTAAACATGTG
AAGATGTTGAAGGGGGTGAATCAGCCGGATGAGCTGCCCTAGATTTTAAC
TTATTTAGGGTGGGGATAGCGAGAGGGAAGCAGATATCCATTGTTAATGA
TACGAAGAAAGGAAGATGTATCATACACGTTTTGTACGTACTGCATACAG
CTGTGACCTGAGGGTCCGATACATGAATACTATACATAGTTATACGAAGT
GGTG back to topCoding sequence (CDS) from alignment at ch3:3800373..3802276+ >KJC3_004052-T1 ID=KJC3_004052-T1|Name=KJC3_004052-T1|organism=Aspergillus niger KJC3|type=CDS|length=1632bp|location=Sequence derived from alignment at ch3:3800373..3802276+ (Aspergillus niger KJC3)
ATGTCTCGTCTGTTGCGAACCGCCTTCCGCCTTCCCCGGGCCTCATTCCC
TCCGGCCTCCGTTCTCAGCCGTCGTGTCTATTCGTCCTCTGTCGTTCGTC
GCTCAGCAGCTAATGCTATCCCTCCCTCCAACAATGTGGCTCCCACATCA
AGTGATGCTGCTCCCACAGCTAGCAGTGTTGCCTCCGCAGCCAGCATTGC
GGCCGCCGAACCGAGTGCATCACATGAAATAGCAGATGCAAGCAATGATC
CTGCATCATCGCAGTCCAATCAATCCTCACCTCCGGAAGCAGGTGATCAA
CACGACGATAAGACCCAGACAACGAGCGCCGGGACAGTGGAATATCAGGA
TGGTAAATACACAATTAGACGCAAAGAAGGAGGCCTAGTCATCGAAGAAG
GTCGCAAACGCCCCATTGAAATCCTAGACATCATCCTTCGCGACTCCTGC
AAATGCTCTTCCTGCGTGGACCCTCACTCCAAGCAACGCAATTTCCGCAC
GAGCGACATATCCTCCGACATCATCTCCGAGAACCCTACCATCAAGCACG
GAAAGCTGCACGTAACATGGAAGAACGACTTCCGCGGCGCTCCCGCCGAA
TCCGCACACGAGTCCACATACGATCTCCGCCAGCTCCGACACCCCATCAT
CTCCCCCGTGGAAATGGAGTCCGCGGGCAAAAACCGCTGGCGAGCATATT
GGGACAACAGCCGCATGCAACACTGGCAGCACTGGATCACCTACGACCAG
TTCATCAACAACGACATCTCCTTCGCGTGGTCCATGCGTACCCTCGCCGA
ACTCGGCCTCATCTTCATCAAAGACATCCCAGACTCGCGCGAAATGGTCG
AGAAGATCGCCACCCGCATGGGTCCCATCCGCGATACCTTCTACGGCCGC
ACCTGGGACGTGCGCAGCATCCCCCAAGCCACCAACGTCGCCTACACAGA
CCAGTTCCTCGGCTTCCACATGGACCTGATGTACATGAACGACCCACCCG
GCTACCAGCTTCTGCACTGTCTCCAGAACTCCTGCGAGGGAGGCGAATCC
CTCTTCGTCGACACCTTCCGCGTAGCATACGACATGAAACAGGACGACCA
CAAAAACTACTCCCGTCTCCTTCATCATCACATCCCCTACCACTACAACC
ACCCGGACCACTTCTACACAAATTCTTGGCCCGTCTTCGAAACAGAGACC
TTTGATAACAGCGTCACGGAGGGAACTAATTTCTCTAAATCCCGTCTCGT
TCACGTCAATTATTCGCCTCCGTTCCAGGCACCCAGGAAGGTGCAGTCTC
CTGTGCCCCGCAAGTTCCGCGAGAAGAATGAGGCTCTCGCTAAGTTCGCT
TCTCTGCTGGAGGACGAACGATATATGTTCGAGCTGAAGTTGAACCCCGG
TGAATGTGTTGTCTTCGAGAATCGCCGTGTGGCGCACGCGCGTCGTGGGT
TCAAGACTAGTACTGGTGAGAGGTGGCTGGCTGGTGCGTATGTGGATGAG
GATGCTATGTTGTCTGGGTTTAAGACTTCGTCGAATAAGTATCCGAATTT
GTGGAGGCTGAAGCGGAAGGGACTGAATAGTAAACATGTGAAGATGTTGA
AGGGGGTGAATCAGCCGGATGAGCTGCCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004052-T1.utr5p1 | KJC3_004052-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004052-T1.utr3p1 | KJC3_004052-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038492 |
| DBxref | InterPro:IPR042098 |
| DBxref | InterPro:IPR003819 |
| DBxref | PFAM:PF02668 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3800373..3802276 + |
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