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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3804272..3806728+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004054-T1 ID=KJC3_004054-T1|Name=KJC3_004054-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2457bp|location=Sequence derived from alignment at ch3:3804272..3806728+ (Aspergillus niger KJC3)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAGCAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCCGAACGGTATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGGAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGTTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTTGATGGTTCACTTCCTTTGGATGCAGTTTCAGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGACAAGGCAATGGAGGT
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCCTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAG
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGGTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCC
GTCACCACCACGCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACTATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGACGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTCAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAGTAATAAACATCTTACCTTT
TTTTCTTCTTATTACGTCAATTATTTTTTGCTCTTCCGTACGGGACTGTG
TTTTTGACCAGGCAGCAGACCGGGTTCAGGATACAGGTCCTGGTGGTTTG
GTTCGCTTATTGAGAATGCCTTTCGAGGCTTCTTGCGGAGGTTCCCCATG
CTTTGAACTCTAGATTATGGGTATGCGAGCCGCGCTTCTGACCAAAACTT
ACTCGCCTACTACCTAACTGCCTAGTATCTACATTCTATCACGAACAAAA
AGGCACA back to topCoding sequence (CDS) from alignment at ch3:3804272..3806728+ >KJC3_004054-T1 ID=KJC3_004054-T1|Name=KJC3_004054-T1|organism=Aspergillus niger KJC3|type=CDS|length=4536bp|location=Sequence derived from alignment at ch3:3804272..3806728+ (Aspergillus niger KJC3)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAGCAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCCGAACGGTATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGGAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGTTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTTGATGGTTCACTTCCTTTGGATGCAGTTTCAGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGACAAGGCAATGGAGGT
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCCTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAG
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGGTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCC
GTCACCACCACGCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACTATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGACGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTCAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAACCGGGTTCAGGATACAGGT
CCTGGTGGTTTGGTTCGCTTATTGAGAATGCCTTTCGAGGCTTCTTGCGG
AGGTTCCCCATGCTTTGAATGGGAGGAAACAAGCGCAAGCGCACAGAGGC
TGGATGTTCAGATGACGAAGATCCAGTAAGAAGCAGCTCAGATGCGAATA
GCTTTGGCGTTGCTCAAACGCTTTCGCTCCTAAACTCGGGCAAGACAAAG
TCTCCGAACGGTATCGACTCGGAAGAACCTGGGAAGGCGCAGGATGATAT
GCCGAAGGAAAGAGCTTCGAAGAAGAAGCGCGTGGATGGGGAGAAGACAA
AATACCCCGTCCTTACCTATGTTGAAGGGAAATTGCAATCATCCATCCGG
ATCTCCGATCTCCAGAGTCTGCTACTCTACTGTTTTGCTGATGGCGTCGC
GCCGCAGTGGATCTCAATCAAACACTCTGGTCATGTTAGGAAGATTGTCG
TGCTGATGGTGCCTGGTCTGGAACTGGGCATGTTTGATGGTTCACTTCCT
TTGGATGCAGTTTCAGTTACTGAGAAGGAGACGGAAGAACCTGCCGGTGC
GGACAAGGCAATGGAGGTGGATACAAAAGCGGAAGAATTTGCTCGCTGGA
AGCAAGGCCTGCCGCTGGAGGACCGGTCACATCGGTTCAATCCTCGCCCT
CTTTCGCGTGGTGACCTTCCGGCTCCCCTACAACCGCTAGCGGACATGTT
TCCTCACGCCTGGCCCGTAAAAGCCCCCGGTGATTCCAAGTACAACAAGA
TCCACTCTCCACTTCAAGCCATACTTCTATCTGCTCTACCGAAGGGCAAG
GACAGTAACACGAAGGGAGTAAAACCTCCCAAGGTGGACAAGAGTATCGC
CTTCCAGCGTACACCAATCACCACTTTTATCAGTTCCCTGGAAGATCTCC
GGGAGAATGACTATGTGCTTCATCCGGCTCTGCTCGCCACAGAACAAGAG
AAGTCGACTTTGTTGGAGAACCGTAAGCGGGCCGGACATTCCAAGGAAGA
TGGATGGGTAGATACTCACGTCGAGAGCTTGGAGGCTGGTCAGGTACCAG
ACTCTGAAATCCAGCAAGGCAGCATGACCGCAGGCCGGGATGTGCTAGCG
TTGGATTGCGAGATGTGCATAACTGAAGGTGGCCAATCCGAGCTCACGCG
CATTAGCATGGTCCGGTGGGATGGTGAAGTCGTACTAGATGAGTTGGTGA
AACCCCAGCGACCTATCATCGACTATTTGACTCGTTTCTCCGGTATCACG
AAAGAATTACTCGATCCCGTCACCACCACGCTTGCCGATGTCCAGCAGAA
GCTTCTCTCCCTCCTTACTCCTCGTACTATTCTCGTCGGCCACTCTCTCA
ATTCCGATTTTAACGCCCTGAAACTCACTCACCCGTTTATTGTCGACACC
ACATTTATTTACCCCCATCCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAG
ATGGCTCACCCAGAAGTATCTCGGAAAAGAGATCCAGAAGGGCCAGACCG
GCCATGACTCGATCGAAGATGCGCGCGCAGTGCTCGAACTTGTGAAGCAG
AAGTGCGAAAAGGGTGAGCGCTGGGGCACCAGTGAGGCATCGAACGAGAG
TATTTTCAAGCGCCTCGCACGCTCCATGCGTTCGGGGAAATCGGCCACCA
ACGAAGGCCGCACCGGCGCTGTTGTCGACTGGGGCAACCCCGAGCGCGGC
TTTGGGTCGCAGGCGACTGCGTCGATCGGGTGCAGCAACGACACCGACGT
AGTAAATGGCATCTCGAAGGTAGTCAACGGCGACGACAGCAACCCCTCCA
TTCCCGGAGGTGGTGTTGACTTCACATGGGCTAGGTTGCGTGAGCTTGAA
GTTTATCGCGGCTGGTGCAATCGGATGCCCGACCCCAACAACGCCAACGA
GTCGACGACGCTCGTTCCCCCTCCTGAAGAAACGACTCCGACATCCGCCG
CCGTCTCCCCCACCAAAGAAGCCACTCGCAACCTCGCCGACACCGTCTCT
CGTACCGTCTCCAACATCCACCAAATCTACCAATCCCTCCCACCTTGCAC
GTTATTCCTTGTCTACTCTGGTACCGGAGATCCCCGCGAAGTCAGCCGCC
TCCAAGCCATGCACAAGACCTTCCGCGAAGAATTCAACTCCCGCAAACCG
TGGGATGAGCTGACCGTCAAATGGACCGATACTGAGGAGCAGGCGCTCAA
GAAGGCCTGTGAGCGAGCCAGAGAAGGCTGCGGGTTCATGTGTGTGAAAC
CGGGTTCAGGATACAGGTCCTGGTGGTTTGGTTCGCTTATTGAGAATGCC
TTTCGAGGCTTCTTGCGGAGGTTCCCCATGCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004054-T1.utr3p1 | KJC3_004054-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR034922 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3804272..3806728 + |
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