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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3900177..3903435+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004081-T1 ID=KJC3_004081-T1|Name=KJC3_004081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3259bp|location=Sequence derived from alignment at ch3:3900177..3903435+ (Aspergillus niger KJC3)
TATCGTCGCTCTCCATTCAATCCAAACGAACTAGACTATCAGTAGTGGGT
GTCCACCCTCAACTCACTTATTCACTCACTCACTCACTCACTTGCCACAA
GAGTATTATTATTATTCTCTCTCTTGACTTGCCTGTCTGTCCCTTTCTCT
TTTTCCAACTCTCTCTCTCCTACTCTCTTTTCTCTTCCTCTTCCTCTCTC
CCCTCTCTCTGTCACACACACTCTCTCTCTCTCCACTCACCCTTACACTA
TCTATCTATCTATCCATCTACTACTTACTCTTACCCTCCCTCCCCCTTTC
AGTCTGCAGCTCCAAATCTCAAGACATAACAACATCCATCCGTCGACTCC
CGCCCACACCCGCCGCACCCACTTTCTCTCCTCCTCCAACAGAGGTACTA
CCAAGAACCAGAAAAAACCAATTCAATTCCACTTTCACTATTTATCCACC
TCCACCCACGGACAGTAGACGGCAACCCGGCAAACTTTCAATCATTCAAT
CAATTAATCGTTATTATTGCTTGACCGTTTTACCACCCCGCCAGCCTATT
TCCCATCGGCTCCATTCAGATCTCTCCTTTTCCCCTGTTCCGTTCCAGAG
CTGAGCTCGTGTGGTGGCTCCCTCCCTCCACCTCCCCAAACTCAGGTCTC
CATCGGCCGCGCACTTCGGGGAAAACGTCCGACCCTGCCGGTGCGTATAT
CTTGTTCCCTAACGGTGAAGACGCTTGGACAGAAAAAAAAGGAATCCACT
TGGCTACCGATTCAAGTCCATTTTAAGGCTGACAACGGTCCAGATTGATT
GAATGACTCTCGCATTCATTTAATCTGCGGTCTGTTCCTCCCTCCACCGT
CCAGTCCCATCGAATCCTCTCTCTCTTCGCTTCCCCTCATTCTTCCCGCC
TCCGTCCTCCGCTTCTTCGGTGCACCTCCCCCGTCGGCCATCTACTACTG
ATCGCGCCGGTCGCATTTCTCTCAATCACCCTCTTTTTCAATCTTCACAG
CCATCATGACTTCCATAAATGGTGGTCCGATGTCTGTGGACCTGAGTGCG
GCCAATCGCCAAACTATGACACCAGAGGCCATGCCAAGTAAGTTCCCGGC
TTCCTTTGACCTGGAACCCTCACATTGCTGCTTGTATGCCTGTGGTGATA
CGATCGACGACCGTTGTTTATTTCATTCCTTTCCTGGGGAACATGTGTGT
TGGATACACAGAGCATCCCGGATTGGGGAAAGGCTGCAGTCGGCACCGTT
CGCTCGTAACCTACCAATTTCTTGGTTCTGTCATCTGCACTGCCCGCATG
TTGTATGACGTGATGTGCTGTACCTACATGTTCTGTTTTGATCTTGTGAT
ATTTCTTCGCCTGCTGTGGTCTTGCGTTGCTTTGCTTCGGAGAGGATCCC
GTCAACTACCCGCTCTGACCCGCTGCTTGCAGGCCAACCCAATTCTAGAC
CGTCGACAATCGGGGCCGACTTTTTCAAATTCTTCAGCGGCACACAGAAA
AAGGTTACTCGAGGTTTGTGCTACCGTGGTGTTCGCTCTTGTCCGTACTC
GTTGTAACCTGGCTCCTTCTAGATGGTCAACCCGCCAAACGACGTGGCCC
CAAGCCCGACAGCAAACCGGCCCTTACCAGACGACAGGAATTGAATCGCC
AGGCTCAGAGGTACGTGGCTCTCCCGTCTCTGCACTTGTCTCGTCAGGAA
CAGATGCCAACGGGCTGTTTAGAACCCATCGCGAGCGCAAGGAACAATAT
ATACGGGCTTTGGAAACGGAGGTGTCGCGGTTACGAGAGGCATACACACA
AGAGATCTCGGCGGCCAACTTGACGGTGGTTCAGCACCGAGATATGGTGC
AGTCGCTATCAGACGAAAACGCCATTCTGAAAGACATCCTGACGGCCCAT
GGCATCAACTACGAGCCCGAAGTCGAGCGGCGCAAGGCTGAACGACCCAC
CATCGGCTATCAGTCCAGCCCATTTGCCAGCAGTAGTACCGGATCACAGC
CCACCGGCGTTGCTCCTTCCAATCCCTCCACGAACAACATGTACACCACG
CCACCTACGACAGTCTCGGCCAGCTTGAGTCCGATCACCACTGGGATCGA
GCAAATTGATGTGTCGTCGAGCGAGATGTCACCACCGCAAGGGCCGTATC
AGGCCGCTCCGTGTGACGCCCTGGCGACGCTAGACCAGATAGCGCCAGTG
AGCCGGGCGCCGAGGCAGCCATCGGGCATCTTCGAAGAACTTCCCCAGCT
GCAGATTGACTTTATTCTGACGTACGCCCGCCACATCTTCATCTCACAGA
GGATGGTATGACTGACTGCTGTCTAGATTGGAATCGCCGTGTCGGGAACA
CACCGACTATCTCTGCCGCCGATCGATCACCGAAGCCGATGACGAGGACA
TGCCATTCTCGGGTCATGCCTTGATGGCGACCTGCCCGCCGCCCAGTTAC
ATCGCGAACACCTCGAACGAACAGACTTATCCGCACAAGACCTACGACCT
CCCTCATGCCAACCTGTCGACCCTTCTCAACCTCAGTCGGCAGCTTGTGA
CGGATGGACAGATCACCCCCATCATGGCGCTTCAGTGTCTCAAGAACCAC
GAGCTCTACCGCAGCCTGACCAAGGAGGACGTCAAGGTGATCATCGAGAC
GCTAAACACCAAAGTGCGCTGCTACGGCTTTGGCGCGGTGGTGGAAGATT
TCGAACTGATGGACTGCCTCAGCAGTGTGCTCGGATCTAAGGTCGAGGGC
GCTCTGTCACATCCGGGAGATGAGATGATGTATTCGTGAGCTGGTCTGGC
GGTAGTGACCTGATCTGGACGGAGTTTCATGGGGTGATTCTTTGGGTTTG
GGTATCTGTTCTAACACGGATTTTGATTTGGCGAGGTGTATATAAAAGCT
CTGGGAGCAAGGCTGTTCTTTTTCTTCTCACTTCTATCTTCCCTTTGAGG
ATTCTTCCTATGGGGTTCAACGCCAGAGCGGTGCTGGCCATACAACTTGT
TTAATCTTGAAGGTGTCTTCTATTCTATTCTCCTATCTGTTTTGGGATCT
TTTCCCACATGGGTTCAGCGATGCCACCCAACCTAATCAATAATCACGAG
AACCACGAATGTCCAGCTAGCTTAGCTAAATCGCCATAATACATACATAC
ATACATACAAACCATATCCTACAATCAAATAAGACATATAATAACAATAA
CAATAATAATAATAATCAAACAGTAATACCCGTAACATCCTCCCCCCTCC
GAATCCTCC back to topCoding sequence (CDS) from alignment at ch3:3900177..3903435+ >KJC3_004081-T1 ID=KJC3_004081-T1|Name=KJC3_004081-T1|organism=Aspergillus niger KJC3|type=CDS|length=6315bp|location=Sequence derived from alignment at ch3:3900177..3903435+ (Aspergillus niger KJC3)
ATGACTTCCATAAATGGTGGTCCGATGTCTGTGGACCTGAGTGCGGCCAA
TCGCCAAACTATGACACCAGAGGCCATGCCAAGCCAACCCAATTCTAGAC
CGTCGACAATCGGGGCCGACTTTTTCAAATTCTTCAGCGGCACACAGAAA
AAGGTTACTCGAGATGGTCAACCCGCCAAACGACGTGGCCCCAAGCCCGA
CAGCAAACCGGCCCTTACCAGACGACAGGAATTGAATCGCCAGGCTCAGA
GAACCCATCGCGAGCGCAAGGAACAATATATACGGGCTTTGGAAACGGAG
GTGTCGCGGTTACGAGAGGCATACACACAAGAGATCTCGGCGGCCAACTT
GACGGTGGTTCAGCACCGAGATATGGTGCAGTCGCTATCAGACGAAAACG
CCATTCTGAAAGACATCCTGACGGCCCATGGCATCAACTACGAGCCCGAA
GTCGAGCGGCGCAAGGCTGAACGACCCACCATCGGCTATCAGTCCAGCCC
ATTTGCCAGCAGTAGTACCGGATCACAGCCCACCGGCGTTGCTCCTTCCA
ATCCCTCCACGAACAACATGTACACCACGCCACCTACGACAGTCTCGGCC
AGCTTGAGTCCGATCACCACTGGGATCGAGCAAATTGATGTGTCGTCGAG
CGAGATGTCACCACCGCAAGGGCCGTATCAGGCCGCTCCGTGTGACGCCC
TGGCGACGCTAGACCAGATAGCGCCAGTGAGCCGGGCGCCGAGGCAGCCA
TCGGGCATCTTCGAAGAACTTCCCCAGCTGCAGATTGACTTTATTCTGAC
ATTGGAATCGCCGTGTCGGGAACACACCGACTATCTCTGCCGCCGATCGA
TCACCGAAGCCGATGACGAGGACATGCCATTCTCGGGTCATGCCTTGATG
GCGACCTGCCCGCCGCCCAGTTACATCGCGAACACCTCGAACGAACAGAC
TTATCCGCACAAGACCTACGACCTCCCTCATGCCAACCTGTCGACCCTTC
TCAACCTCAGTCGGCAGCTTGTGACGGATGGACAGATCACCCCCATCATG
GCGCTTCAGTGTCTCAAGAACCACGAGCTCTACCGCAGCCTGACCAAGGA
GGACGTCAAGGTGATCATCGAGACGCTAAACACCAAAGTGCGCTGCTACG
GCTTTGGCGCGGTGGTGGAAGATTTCGAACTGATGGACTGCCTCAGCAGT
GTGCTCGGATCTAAGGTCGAGGGCGCTCTGTCACATCCGGGAGATGAGAT
GATGTATTCGTGAATGACTTCCATAAATGGTGGTCCGATGTCTGTGGACC
TGAGTGCGGCCAATCGCCAAACTATGACACCAGAGGCCATGCCAAGCCAA
CCCAATTCTAGACCGTCGACAATCGGGGCCGACTTTTTCAAATTCTTCAG
CGGCACACAGAAAAAGGTTACTCGAGATGGTCAACCCGCCAAACGACGTG
GCCCCAAGCCCGACAGCAAACCGGCCCTTACCAGACGACAGGAATTGAAT
CGCCAGGCTCAGAGAACCCATCGCGAGCGCAAGGAACAATATATACGGGC
TTTGGAAACGGAGGTGTCGCGGTTACGAGAGGCATACACACAAGAGATCT
CGGCGGCCAACTTGACGGTGGTTCAGCACCGAGATATGGTGCAGTCGCTA
TCAGACGAAAACGCCATTCTGAAAGACATCCTGACGGCCCATGGCATCAA
CTACGAGCCCGAAGTCGAGCGGCGCAAGGCTGAACGACCCACCATCGGCT
ATCAGTCCAGCCCATTTGCCAGCAGTAGTACCGGATCACAGCCCACCGGC
GTTGCTCCTTCCAATCCCTCCACGAACAACATGTACACCACGCCACCTAC
GACAGTCTCGGCCAGCTTGAGTCCGATCACCACTGGGATCGAGCAAATTG
ATGTGTCGTCGAGCGAGATGTCACCACCGCAAGGGCCGTATCAGGCCGCT
CCGTGTGACGCCCTGGCGACGCTAGACCAGATAGCGCCAGTGAGCCGGGC
GCCGAGGCAGCCATCGGGCATCTTCGAAGAACTTCCCCAGCTGCAGATTG
ACTTTATTCTGACATTGGAATCGCCGTGTCGGGAACACACCGACTATCTC
TGCCGCCGATCGATCACCGAAGCCGATGACGAGGACATGCCATTCTCGGG
TCATGCCTTGATGGCGACCTGCCCGCCGCCCAGTTACATCGCGAACACCT
CGAACGAACAGACTTATCCGCACAAGACCTACGACCTCCCTCATGCCAAC
CTGTCGACCCTTCTCAACCTCAGTCGGCAGCTTGTGACGGATGGACAGAT
CACCCCCATCATGGCGCTTCAGTGTCTCAAGAACCACGAGCTCTACCGCA
GCCTGACCAAGGAGGACGTCAAGGTGATCATCGAGACGCTAAACACCAAA
GTGCGCTGCTACGGCTTTGGCGCGGTGGTGGAAGATTTCGAACTGATGGA
CTGCCTCAGCAGTGTGCTCGGATCTAAGGTCGAGGGCGCTCTGTCACATC
CGGGAGATGAGATGATGTATTCGTGAATGACTTCCATAAATGGTGGTCCG
ATGTCTGTGGACCTGAGTGCGGCCAATCGCCAAACTATGACACCAGAGGC
CATGCCAAGCCAACCCAATTCTAGACCGTCGACAATCGGGGCCGACTTTT
TCAAATTCTTCAGCGGCACACAGAAAAAGGTTACTCGAGATGGTCAACCC
GCCAAACGACGTGGCCCCAAGCCCGACAGCAAACCGGCCCTTACCAGACG
ACAGGAATTGAATCGCCAGGCTCAGAGAACCCATCGCGAGCGCAAGGAAC
AATATATACGGGCTTTGGAAACGGAGGTGTCGCGGTTACGAGAGGCATAC
ACACAAGAGATCTCGGCGGCCAACTTGACGGTGGTTCAGCACCGAGATAT
GGTGCAGTCGCTATCAGACGAAAACGCCATTCTGAAAGACATCCTGACGG
CCCATGGCATCAACTACGAGCCCGAAGTCGAGCGGCGCAAGGCTGAACGA
CCCACCATCGGCTATCAGTCCAGCCCATTTGCCAGCAGTAGTACCGGATC
ACAGCCCACCGGCGTTGCTCCTTCCAATCCCTCCACGAACAACATGTACA
CCACGCCACCTACGACAGTCTCGGCCAGCTTGAGTCCGATCACCACTGGG
ATCGAGCAAATTGATGTGTCGTCGAGCGAGATGTCACCACCGCAAGGGCC
GTATCAGGCCGCTCCGTGTGACGCCCTGGCGACGCTAGACCAGATAGCGC
CAGTGAGCCGGGCGCCGAGGCAGCCATCGGGCATCTTCGAAGAACTTCCC
CAGCTGCAGATTGACTTTATTCTGACATTGGAATCGCCGTGTCGGGAACA
CACCGACTATCTCTGCCGCCGATCGATCACCGAAGCCGATGACGAGGACA
TGCCATTCTCGGGTCATGCCTTGATGGCGACCTGCCCGCCGCCCAGTTAC
ATCGCGAACACCTCGAACGAACAGACTTATCCGCACAAGACCTACGACCT
CCCTCATGCCAACCTGTCGACCCTTCTCAACCTCAGTCGGCAGCTTGTGA
CGGATGGACAGATCACCCCCATCATGGCGCTTCAGTGTCTCAAGAACCAC
GAGCTCTACCGCAGCCTGACCAAGGAGGACGTCAAGGTGATCATCGAGAC
GCTAAACACCAAAGTGCGCTGCTACGGCTTTGGCGCGGTGGTGGAAGATT
TCGAACTGATGGACTGCCTCAGCAGTGTGCTCGGATCTAAGGTCGAGGGC
GCTCTGTCACATCCGGGAGATGAGATGATGTATTCGTGAATGACTTCCAT
AAATGGTGGTCCGATGTCTGTGGACCTGAGTGCGGCCAATCGCCAAACTA
TGACACCAGAGGCCATGCCAAGCCAACCCAATTCTAGACCGTCGACAATC
GGGGCCGACTTTTTCAAATTCTTCAGCGGCACACAGAAAAAGGTTACTCG
AGATGGTCAACCCGCCAAACGACGTGGCCCCAAGCCCGACAGCAAACCGG
CCCTTACCAGACGACAGGAATTGAATCGCCAGGCTCAGAGAACCCATCGC
GAGCGCAAGGAACAATATATACGGGCTTTGGAAACGGAGGTGTCGCGGTT
ACGAGAGGCATACACACAAGAGATCTCGGCGGCCAACTTGACGGTGGTTC
AGCACCGAGATATGGTGCAGTCGCTATCAGACGAAAACGCCATTCTGAAA
GACATCCTGACGGCCCATGGCATCAACTACGAGCCCGAAGTCGAGCGGCG
CAAGGCTGAACGACCCACCATCGGCTATCAGTCCAGCCCATTTGCCAGCA
GTAGTACCGGATCACAGCCCACCGGCGTTGCTCCTTCCAATCCCTCCACG
AACAACATGTACACCACGCCACCTACGACAGTCTCGGCCAGCTTGAGTCC
GATCACCACTGGGATCGAGCAAATTGATGTGTCGTCGAGCGAGATGTCAC
CACCGCAAGGGCCGTATCAGGCCGCTCCGTGTGACGCCCTGGCGACGCTA
GACCAGATAGCGCCAGTGAGCCGGGCGCCGAGGCAGCCATCGGGCATCTT
CGAAGAACTTCCCCAGCTGCAGATTGACTTTATTCTGACATTGGAATCGC
CGTGTCGGGAACACACCGACTATCTCTGCCGCCGATCGATCACCGAAGCC
GATGACGAGGACATGCCATTCTCGGGTCATGCCTTGATGGCGACCTGCCC
GCCGCCCAGTTACATCGCGAACACCTCGAACGAACAGACTTATCCGCACA
AGACCTACGACCTCCCTCATGCCAACCTGTCGACCCTTCTCAACCTCAGT
CGGCAGCTTGTGACGGATGGACAGATCACCCCCATCATGGCGCTTCAGTG
TCTCAAGAACCACGAGCTCTACCGCAGCCTGACCAAGGAGGACGTCAAGG
TGATCATCGAGACGCTAAACACCAAAGTGCGCTGCTACGGCTTTGGCGCG
GTGGTGGAAGATTTCGAACTGATGGACTGCCTCAGCAGTGTGCTCGGATC
TAAGGTCGAGGGCGCTCTGTCACATCCGGGAGATGAGATGATGTATTCGT
GAATGACTTCCATAAATGGTGGTCCGATGTCTGTGGACCTGAGTGCGGCC
AATCGCCAAACTATGACACCAGAGGCCATGCCAAGCCAACCCAATTCTAG
ACCGTCGACAATCGGGGCCGACTTTTTCAAATTCTTCAGCGGCACACAGA
AAAAGGTTACTCGAGATGGTCAACCCGCCAAACGACGTGGCCCCAAGCCC
GACAGCAAACCGGCCCTTACCAGACGACAGGAATTGAATCGCCAGGCTCA
GAGAACCCATCGCGAGCGCAAGGAACAATATATACGGGCTTTGGAAACGG
AGGTGTCGCGGTTACGAGAGGCATACACACAAGAGATCTCGGCGGCCAAC
TTGACGGTGGTTCAGCACCGAGATATGGTGCAGTCGCTATCAGACGAAAA
CGCCATTCTGAAAGACATCCTGACGGCCCATGGCATCAACTACGAGCCCG
AAGTCGAGCGGCGCAAGGCTGAACGACCCACCATCGGCTATCAGTCCAGC
CCATTTGCCAGCAGTAGTACCGGATCACAGCCCACCGGCGTTGCTCCTTC
CAATCCCTCCACGAACAACATGTACACCACGCCACCTACGACAGTCTCGG
CCAGCTTGAGTCCGATCACCACTGGGATCGAGCAAATTGATGTGTCGTCG
AGCGAGATGTCACCACCGCAAGGGCCGTATCAGGCCGCTCCGTGTGACGC
CCTGGCGACGCTAGACCAGATAGCGCCAGTGAGCCGGGCGCCGAGGCAGC
CATCGGGCATCTTCGAAGAACTTCCCCAGCTGCAGATTGACTTTATTCTG
ACATTGGAATCGCCGTGTCGGGAACACACCGACTATCTCTGCCGCCGATC
GATCACCGAAGCCGATGACGAGGACATGCCATTCTCGGGTCATGCCTTGA
TGGCGACCTGCCCGCCGCCCAGTTACATCGCGAACACCTCGAACGAACAG
ACTTATCCGCACAAGACCTACGACCTCCCTCATGCCAACCTGTCGACCCT
TCTCAACCTCAGTCGGCAGCTTGTGACGGATGGACAGATCACCCCCATCA
TGGCGCTTCAGTGTCTCAAGAACCACGAGCTCTACCGCAGCCTGACCAAG
GAGGACGTCAAGGTGATCATCGAGACGCTAAACACCAAAGTGCGCTGCTA
CGGCTTTGGCGCGGTGGTGGAAGATTTCGAACTGATGGACTGCCTCAGCA
GTGTGCTCGGATCTAAGGTCGAGGGCGCTCTGTCACATCCGGGAGATGAG
ATGATGTATTCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004081-T1.utr5p1 | KJC3_004081-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004081-T1.utr3p1 | KJC3_004081-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3900177..3903435 + |
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