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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3921485..3923257- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004092-T1 ID=KJC3_004092-T1|Name=KJC3_004092-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1773bp|location=Sequence derived from alignment at ch3:3921485..3923257- (Aspergillus niger KJC3)
CTTCGCCCCACCCCCCTTCACTCTATACAAATCTCTTCGACATCGCTGAG
TTGATCCTTACATCGGCACACATCCCCAGAGCAATATTATATTCCAATTT
ACATGTATTACTACCCTCGGTTATCGACATATCCACGTTCTGACTCGCTT
ATGTGACCATCTCAGTTTACCGCAGCTGAATTCCTTCTATGACCGACATC
GTACCCGCCTCATACTGAACTCTTGGCCAGATGTCTGCAAACATCCTGAG
TTTGACAGAGCTAGGATGTCTCATACAGCAGCGCTATCCAGGTATCTCTC
GTGATGAAGCCTATGTCCGACTTTTCCACGACCTGAAACCTCTTATGGAT
CCTACGGCGAAAGGATCGTTTAGCATACTAAAAGCACTTGGTATTATCTT
CAACAAGCCAGTTACTAGCCTCGTTGCCTCTGCAAGTCGTATAGCCCAGC
GCATCCTCGAAGCCATTTCCCAGCACCCTACGTGCACGTCCCAGCCCGTC
GAGGATAACCCCAATGACATCTCGGATCAGATAATCATACAAATGCTCCG
CAACCTCGCAGCGACCGCTGGGGAACCTACAAACGTGGCAGCTGGTACCG
GTTTCTCTCTCCGTGGAGAGAACTTGATTGAGCACAGGTTTGGTGGGTAC
GTCGTTGGAAGTTCACCGTACAAAATGAGCAAAAACAACAGACCATTAAC
AAAACAATAAGCAGCTTCACTGGCGGTTCAGCCCAAACGTTCAAAATCCT
CAGTAATTCATTCAACGCTGGGCCTGAATTTACTGCCGTCTTTGCTTCGT
GTGCTCTGGTAAGTACAGCCCTCGATACACAGACAAAACCGAGGGAGTTA
CAGATCATCGGGCTACGTCTCCAGGATGTGCCAGATGAACTGAGCTATCA
GACGACTGCAAGGGTTCAAAGCTGGCAGACCCAAGGCTTCGGGTTATTCA
TATATAGATTTGTCGACAATGAGATTGAGAATGCTGGTGGAGAAACGTCC
GTTGGCCGTCATGCTTTCTATGTCTACAATCGGACAACCAGTGCCAACGA
GGTCTTCGAGAGACGGGCCCGGAAAAGCCCCTTCCCATCCTCCTTCGGCG
GAATGGCCTCCAACCTTGAGGCTGTATTTTCCCTAATGTGGCAGAATCGT
CGGTCGCTTCGACAAATAGATCCGGTCAACGCAGATAACGTGGTATTCCA
CTTGCTAGTCCCAGCGAAAAGGACCTTTGTTATTGCTGAAAGAATGGCTA
TCGATGATGGAATTGGGAAGCTAATCATCAAAGGGCACACGGACGAAGGT
GCCTACTATGCGTGGTTCAATATTGTATCTGTGCCACGGCAAGTGGTACT
ATATGATGTCGGGAACCTCAATACAGACTCTGCCGATCTCGACAGATCAT
GGAAAGGTGAGAAGAATAGTGCACGTGCATTTTTCGGCTGCGGGCTCGTT
ACAGTTATCACCGGTTTTTTTATCCCCGCGGCAGCGCCATACTTCGCTTG
GCTGTGTTTTGCATCATTAGCGATGGCAATGAAGTATGGCGTAGTGGATC
ATATGCGACGGAGTTTCCGGTCCCCTCCTCGAATTCTCGGTCCTCCATCA
GGGTTTCGCCAAGAATGAAGATTGTTATGTAGTGACCTAATTAAGACGAG
GTATTTGATTGGTACTCTTATCGAACAAAATGGCCGTTTAAAGATATGTA
TTCCAATAACCATCGTAGATGCAGCTGATGGAGGGCTAATCATACTTGAA
GCTATGCTTGAATTGGTGATTAG back to topCoding sequence (CDS) from alignment at ch3:3921485..3923257- >KJC3_004092-T1 ID=KJC3_004092-T1|Name=KJC3_004092-T1|organism=Aspergillus niger KJC3|type=CDS|length=2640bp|location=Sequence derived from alignment at ch3:3921485..3923257- (Aspergillus niger KJC3)
CTTCACTGGCGGTTCAGCCCAAACGTTCAAAATCCTCAGTAATTCATTCA
ACGCTGGGCCTGAATTTACTGCCGTCTTTGCTTCGTGTGCTCTGGTAAGT
ACAGCCCTCGATACACAGACAAAACCGAGGGAGTTACAGATCATCGGGCT
ACGTCTCCAGGATGTGCCAGATGAACTGAGCTATCAGACGACTGCAAGGG
TTCAAAGCTGGCAGACCCAAGGCTTCGGGTTATTCATATATAGATTTGTC
GACAATGAGATTGAGAATGCTGGTGGAGAAACGTCCGTTGGCCGTCATGC
TTTCTATGTCTACAATCGGACAACCAGTGCCAACGAGGTCTTCGAGAGAC
GGGCCCGGAAAAGCCCCTTCCCATCCTCCTTCGGCGGAATGGCCTCCAAC
CTTGAGGCTGTATTTTCCCTAATGTGGCAGAATCGTCGGTCGCTTCGACA
AATAGATCCGGTCAACGCAGATAACGTGGTATTCCACTTGCTAGTCCCAG
CGAAAAGGACCTTTGTTATTGCTGAAAGAATGGCTATCGATGATGGAATT
GGGAAGCTAATCATCAAAGGGCACACGGACGAAGGTGCCTACTATGCGTG
GTTCAATATTGTATCTGTGCCACGGCAAGTGGTACTATATGATGTCGGGA
ACCTCAATACAGACTCTGCCGATCTCGACAGATCATGGAAAGGTGAGAAG
AATAGTGCACGTGCATTTTTCGGCTGCGGGCTCGTTACAGTTATCACCGG
TTTTTTTATCCCCGCGGCAGCGCCATACTTCGCTTGGCTGTGTTTTGCAT
CATTAGCGATGGCAATGAAGTATGGCGTAGTGGATCATATGCGACGGAGT
TTCCGGTCCCCTCCTCGAATTCTCGGTCCTCCATCAGGGTTTCGCCAAGA
ATGAATGTCTGCAAACATCCTGAGTTTGACAGAGCTAGGATGTCTCATAC
AGCAGCGCTATCCAGGTATCTCTCGTGATGAAGCCTATGTCCGACTTTTC
CACGACCTGAAACCTCTTATGGATCCTACGGCGAAAGGATCGTTTAGCAT
ACTAAAAGCACTTGGTATTATCTTCAACAAGCCAGTTACTAGCCTCGTTG
CCTCTGCAAGTCGTATAGCCCAGCGCATCCTCGAAGCCATTTCCCAGCAC
CCTACGTGCACGTCCCAGCCCGTCGAGGATAACCCCAATGACATCTCGGA
TCAGATAATCATACAAATGCTCCGCAACCTCGCAGCGACCGCTGGGGAAC
CTACAAACGTGGCAGCTGGTACCGGTTTCTCTCTCCGTGGAGAGAACTTG
ATTGAGCACAGGTTTGGTGGCTTCACTGGCGGTTCAGCCCAAACGTTCAA
AATCCTCAGTAATTCATTCAACGCTGGGCCTGAATTTACTGCCGTCTTTG
CTTCGTGTGCTCTGGTAAGTACAGCCCTCGATACACAGACAAAACCGAGG
GAGTTACAGATCATCGGGCTACGTCTCCAGGATGTGCCAGATGAACTGAG
CTATCAGACGACTGCAAGGGTTCAAAGCTGGCAGACCCAAGGCTTCGGGT
TATTCATATATAGATTTGTCGACAATGAGATTGAGAATGCTGGTGGAGAA
ACGTCCGTTGGCCGTCATGCTTTCTATGTCTACAATCGGACAACCAGTGC
CAACGAGGTCTTCGAGAGACGGGCCCGGAAAAGCCCCTTCCCATCCTCCT
TCGGCGGAATGGCCTCCAACCTTGAGGCTGTATTTTCCCTAATGTGGCAG
AATCGTCGGTCGCTTCGACAAATAGATCCGGTCAACGCAGATAACGTGGT
ATTCCACTTGCTAGTCCCAGCGAAAAGGACCTTTGTTATTGCTGAAAGAA
TGGCTATCGATGATGGAATTGGGAAGCTAATCATCAAAGGGCACACGGAC
GAAGGTGCCTACTATGCGTGGTTCAATATTGTATCTGTGCCACGGCAAGT
GGTACTATATGATGTCGGGAACCTCAATACAGACTCTGCCGATCTCGACA
GATCATGGAAAGGTGAGAAGAATAGTGCACGTGCATTTTTCGGCTGCGGG
CTCGTTACAGTTATCACCGGTTTTTTTATCCCCGCGGCAGCGCCATACTT
CGCTTGGCTGTGTTTTGCATCATTAGCGATGGCAATGAAGTATGGCGTAG
TGGATCATATGCGACGGAGTTTCCGGTCCCCTCCTCGAATTCTCGGTCCT
CCATCAGGGTTTCGCCAAGAATGAATGTCTGCAAACATCCTGAGTTTGAC
AGAGCTAGGATGTCTCATACAGCAGCGCTATCCAGGTATCTCTCGTGATG
AAGCCTATGTCCGACTTTTCCACGACCTGAAACCTCTTATGGATCCTACG
GCGAAAGGATCGTTTAGCATACTAAAAGCACTTGGTATTATCTTCAACAA
GCCAGTTACTAGCCTCGTTGCCTCTGCAAGTCGTATAGCCCAGCGCATCC
TCGAAGCCATTTCCCAGCACCCTACGTGCACGTCCCAGCCCGTCGAGGAT
AACCCCAATGACATCTCGGATCAGATAATCATACAAATGCTCCGCAACCT
CGCAGCGACCGCTGGGGAACCTACAAACGTGGCAGCTGGTACCGGTTTCT
CTCTCCGTGGAGAGAACTTGATTGAGCACAGGTTTGGTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004092-T1.utr3p1 | KJC3_004092-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3921485..3923257 - |
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