You are here

Home

KJC3_004143-T1, KJC3_004143-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004143-T1
Unique NameKJC3_004143-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4049564..4051707-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004143-T1 ID=KJC3_004143-T1|Name=KJC3_004143-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2144bp|location=Sequence derived from alignment at ch3:4049564..4051707- (Aspergillus niger KJC3)
CGTGTAGGTCCATCTCAGATACTATCACCCGTGTTACAGTCGTGTTTGGC
GCTTAGTCAAGCCCCATCAGTCTTCTGATTAGCCACTATCAAGAGCGCCT
GTAGTTCCTGATCAGTTTCAGAGCAGTCTAGTCGAGCCAACGTTACCTCT
AAGGCGACTAACAATAATATTCTCATGGCCTTTGAAAGTGAGAAGACCCT
AACCAGCTTCATTGATCGACAGCAGCAGCAACAACAATAACCAATGCACT
GCAAAGTTGATGACGAAACTGGTCGCCTCACCTACCGCTGCCATATGGGC
ATAGTACTGACGTCTCAAGATAAATTACTGTATGATGATTTGATTCCGTC
CCGAGGCGTCGAGGAAACAACTCCGTTTCTGGAAGGGAACGACCGAAAAA
CATTCTTATCCTTTGCTAGACAGATGCTCGCCTGGCTCCCGGAGGAGAGA
AAGACAGCTCGTGAGTTGATAGATCACCCATTCCTCAAGCTTGGTGGTTG
ATCTACTGCCACGTTGCTTTAGGCTTAAATGATATCTCGAATAGTCTTCA
TCGTCAAGGGGAAACCTGCTGGCGGGTTCTGTCCAATGGACATTCAGCAT
AACATTGCACTCCTCTGTACTACCGAAGTGAGTCGAAGTGTAACAAATGC
TGTTCCATAATTGGCCCCATAGGCCGAATGACTGCGGGGTATGAGCCTGA
TACTAGCACAGCTTCTTATCTCGCATTGATAACGCATCATCGCCCCCTCA
CTTCTCACCGTATGTATACCTCAGCACCTCCACGGTGTTCTCGCATTATC
AACACCATAGACTTCTGGATCTACACAAACTCCCAGATATCCTATCATGG
CCTCCCAGGAATTCCTGTTAATTCTCATGCCGTGCGCTTTTCCAGACAAA
TGGATTGCCAGCATGAGGAGCGCTGTCCCCCACATCCGCATCGAGAAACG
CGAAATTGACAGGAATGCTACGGAGCTGCCCACAGATATCTCCCCCGGGA
CATGGAGGGATGTTACAGCACTCTTTACTTGGAAGCTTCTTCCGCCCAAG
GAGCTGGTCCCAAGTCTACAATATGTCCAGCTCTTGAGTGCCGGGTGCAA
TCATGTTATGGGGACCTCGCTATTCGCTGAGACTGACGTCGCGTTTTGTA
CAGCGAATGGGGTTCATCCGTGGGTTTTATCTCAGAAGTATCGTGAAAGA
AGGAATTCCACTGACGGATCAGACCTCAAATCACAGAATGGGTTTTCATG
ACATTCCTCGCCTTCCAGCACCATCGTACGTTGACCACGCCAATGAAAGG
AACATAACACTGACGATAAAACAGTACCCGGATATCTGGAGCACCAGAAG
CTCGGCCAATGGATCGATCCCACATCGGACGAAGACACCGAGGATGCAGT
TGGTCTCAGAGTGTAAGTCTGACTTTGGGTTCTATCGACCTTATATCGAC
TGAGACAATATCAGTGGAATAATGGGCTATGGAAGTATCGGCCGGCAATG
CGCCCGGGTCGCCAAAGCCTTCGGCATGAATGTCCATGCCTTCACACTCC
ACCCACGAACCACGCCCGAGTCCCGAAAAACAGATTCATTCAGCGAGCCA
GGTCTGGGGGACGAAGACGGTCAATTTCCGTCCAAGTGGTTCTCGGGCAA
AGATCAACTCAACGAGTTCCTAGGTTCGGATCTCGATTTGCTGGTGATCA
CTGTCCCGCTGACTAGAGAGACGCGAGGTATGATTGGGAGGGAGCAGTTT
AGACATCTCAGCAAGAAGAAGGCATATGTGAGCAACATTGCACGCGGGGC
AGTGATCAAAACAGATGACCTTATGGATGCCCTGGATGCGGGTCACATCC
GAGGAGCGGCCCTGGATGTTACGGATCCGGAGCCATTGCCGGCTGACCAT
AAGCTGTGGGGTTATAAAAATGTTATTATTACGCCGCATTGCAGTGGGAA
CTCAACCCACTATAACGACCGTGCTATCAAGATACTGCAGTGTAATTTGG
AAAGACGGGCTCGAGGGCAGCAGCTTCTCAACCAGGTTGATAAGGGCTTG
GGATACTGATATCGATGGACGAGGATTTGATGATAACATGACTATTCACC
TATATAGACTTATAGACAACTCGAAGCGTTAATCTGAGATCCAC
back to top

Coding sequence (CDS) from alignment at ch3:4049564..4051707-

>KJC3_004143-T1 ID=KJC3_004143-T1|Name=KJC3_004143-T1|organism=Aspergillus niger KJC3|type=CDS|length=4236bp|location=Sequence derived from alignment at ch3:4049564..4051707- (Aspergillus niger KJC3)
TGGAATAATGGGCTATGGAAGTATCGGCCGGCAATGCGCCCGGGTCGCCA
AAGCCTTCGGCATGAATGTCCATGCCTTCACACTCCACCCACGAACCACG
CCCGAGTCCCGAAAAACAGATTCATTCAGCGAGCCAGGTCTGGGGGACGA
AGACGGTCAATTTCCGTCCAAGTGGTTCTCGGGCAAAGATCAACTCAACG
AGTTCCTAGGTTCGGATCTCGATTTGCTGGTGATCACTGTCCCGCTGACT
AGAGAGACGCGAGGTATGATTGGGAGGGAGCAGTTTAGACATCTCAGCAA
GAAGAAGGCATATGTGAGCAACATTGCACGCGGGGCAGTGATCAAAACAG
ATGACCTTATGGATGCCCTGGATGCGGGTCACATCCGAGGAGCGGCCCTG
GATGTTACGGATCCGGAGCCATTGCCGGCTGACCATAAGCTGTGGGGTTA
TAAAAATGTTATTATTACGCCGCATTGCAGTGGGAACTCAACCCACTATA
ACGACCGTGCTATCAAGATACTGCAGTGTAATTTGGAAAGACGGGCTCGA
GGGCAGCAGCTTCTCAACCAGGTTGATAAGGGCTTGGGATACTGATACCC
GGATATCTGGAGCACCAGAAGCTCGGCCAATGGATCGATCCCACATCGGA
CGAAGACACCGAGGATGCAGTTGGTCTCAGAGTACCTCAAATCACAGAAT
GGGTTTTCATGACATTCCTCGCCTTCCAGCACCATCATGGCCTCCCAGGA
ATTCCTGTTAATTCTCATGCCGTGCGCTTTTCCAGACAAATGGATTGCCA
GCATGAGGAGCGCTGTCCCCCACATCCGCATCGAGAAACGCGAAATTGAC
AGGAATGCTACGGAGCTGCCCACAGATATCTCCCCCGGGACATGGAGGGA
TGTTACAGCACTCTTTACTTGGAAGCTTCTTCCGCCCAAGGAGCTGGTCC
CAAGTCTACAATATGTCCAGCTCTTGAGTGCCGGGTGCAATCATGTTATG
GGGACCTCGCTATTCGCTGAGACTGACGTCGCGTTTTGTACAGCGAATGG
GGTTCATCCTGGAATAATGGGCTATGGAAGTATCGGCCGGCAATGCGCCC
GGGTCGCCAAAGCCTTCGGCATGAATGTCCATGCCTTCACACTCCACCCA
CGAACCACGCCCGAGTCCCGAAAAACAGATTCATTCAGCGAGCCAGGTCT
GGGGGACGAAGACGGTCAATTTCCGTCCAAGTGGTTCTCGGGCAAAGATC
AACTCAACGAGTTCCTAGGTTCGGATCTCGATTTGCTGGTGATCACTGTC
CCGCTGACTAGAGAGACGCGAGGTATGATTGGGAGGGAGCAGTTTAGACA
TCTCAGCAAGAAGAAGGCATATGTGAGCAACATTGCACGCGGGGCAGTGA
TCAAAACAGATGACCTTATGGATGCCCTGGATGCGGGTCACATCCGAGGA
GCGGCCCTGGATGTTACGGATCCGGAGCCATTGCCGGCTGACCATAAGCT
GTGGGGTTATAAAAATGTTATTATTACGCCGCATTGCAGTGGGAACTCAA
CCCACTATAACGACCGTGCTATCAAGATACTGCAGTGTAATTTGGAAAGA
CGGGCTCGAGGGCAGCAGCTTCTCAACCAGGTTGATAAGGGCTTGGGATA
CTGATACCCGGATATCTGGAGCACCAGAAGCTCGGCCAATGGATCGATCC
CACATCGGACGAAGACACCGAGGATGCAGTTGGTCTCAGAGTACCTCAAA
TCACAGAATGGGTTTTCATGACATTCCTCGCCTTCCAGCACCATCATGGC
CTCCCAGGAATTCCTGTTAATTCTCATGCCGTGCGCTTTTCCAGACAAAT
GGATTGCCAGCATGAGGAGCGCTGTCCCCCACATCCGCATCGAGAAACGC
GAAATTGACAGGAATGCTACGGAGCTGCCCACAGATATCTCCCCCGGGAC
ATGGAGGGATGTTACAGCACTCTTTACTTGGAAGCTTCTTCCGCCCAAGG
AGCTGGTCCCAAGTCTACAATATGTCCAGCTCTTGAGTGCCGGGTGCAAT
CATGTTATGGGGACCTCGCTATTCGCTGAGACTGACGTCGCGTTTTGTAC
AGCGAATGGGGTTCATCCTGGAATAATGGGCTATGGAAGTATCGGCCGGC
AATGCGCCCGGGTCGCCAAAGCCTTCGGCATGAATGTCCATGCCTTCACA
CTCCACCCACGAACCACGCCCGAGTCCCGAAAAACAGATTCATTCAGCGA
GCCAGGTCTGGGGGACGAAGACGGTCAATTTCCGTCCAAGTGGTTCTCGG
GCAAAGATCAACTCAACGAGTTCCTAGGTTCGGATCTCGATTTGCTGGTG
ATCACTGTCCCGCTGACTAGAGAGACGCGAGGTATGATTGGGAGGGAGCA
GTTTAGACATCTCAGCAAGAAGAAGGCATATGTGAGCAACATTGCACGCG
GGGCAGTGATCAAAACAGATGACCTTATGGATGCCCTGGATGCGGGTCAC
ATCCGAGGAGCGGCCCTGGATGTTACGGATCCGGAGCCATTGCCGGCTGA
CCATAAGCTGTGGGGTTATAAAAATGTTATTATTACGCCGCATTGCAGTG
GGAACTCAACCCACTATAACGACCGTGCTATCAAGATACTGCAGTGTAAT
TTGGAAAGACGGGCTCGAGGGCAGCAGCTTCTCAACCAGGTTGATAAGGG
CTTGGGATACTGATACCCGGATATCTGGAGCACCAGAAGCTCGGCCAATG
GATCGATCCCACATCGGACGAAGACACCGAGGATGCAGTTGGTCTCAGAG
TACCTCAAATCACAGAATGGGTTTTCATGACATTCCTCGCCTTCCAGCAC
CATCATGGCCTCCCAGGAATTCCTGTTAATTCTCATGCCGTGCGCTTTTC
CAGACAAATGGATTGCCAGCATGAGGAGCGCTGTCCCCCACATCCGCATC
GAGAAACGCGAAATTGACAGGAATGCTACGGAGCTGCCCACAGATATCTC
CCCCGGGACATGGAGGGATGTTACAGCACTCTTTACTTGGAAGCTTCTTC
CGCCCAAGGAGCTGGTCCCAAGTCTACAATATGTCCAGCTCTTGAGTGCC
GGGTGCAATCATGTTATGGGGACCTCGCTATTCGCTGAGACTGACGTCGC
GTTTTGTACAGCGAATGGGGTTCATCCTGGAATAATGGGCTATGGAAGTA
TCGGCCGGCAATGCGCCCGGGTCGCCAAAGCCTTCGGCATGAATGTCCAT
GCCTTCACACTCCACCCACGAACCACGCCCGAGTCCCGAAAAACAGATTC
ATTCAGCGAGCCAGGTCTGGGGGACGAAGACGGTCAATTTCCGTCCAAGT
GGTTCTCGGGCAAAGATCAACTCAACGAGTTCCTAGGTTCGGATCTCGAT
TTGCTGGTGATCACTGTCCCGCTGACTAGAGAGACGCGAGGTATGATTGG
GAGGGAGCAGTTTAGACATCTCAGCAAGAAGAAGGCATATGTGAGCAACA
TTGCACGCGGGGCAGTGATCAAAACAGATGACCTTATGGATGCCCTGGAT
GCGGGTCACATCCGAGGAGCGGCCCTGGATGTTACGGATCCGGAGCCATT
GCCGGCTGACCATAAGCTGTGGGGTTATAAAAATGTTATTATTACGCCGC
ATTGCAGTGGGAACTCAACCCACTATAACGACCGTGCTATCAAGATACTG
CAGTGTAATTTGGAAAGACGGGCTCGAGGGCAGCAGCTTCTCAACCAGGT
TGATAAGGGCTTGGGATACTGATACCCGGATATCTGGAGCACCAGAAGCT
CGGCCAATGGATCGATCCCACATCGGACGAAGACACCGAGGATGCAGTTG
GTCTCAGAGTACCTCAAATCACAGAATGGGTTTTCATGACATTCCTCGCC
TTCCAGCACCATCATGGCCTCCCAGGAATTCCTGTTAATTCTCATGCCGT
GCGCTTTTCCAGACAAATGGATTGCCAGCATGAGGAGCGCTGTCCCCCAC
ATCCGCATCGAGAAACGCGAAATTGACAGGAATGCTACGGAGCTGCCCAC
AGATATCTCCCCCGGGACATGGAGGGATGTTACAGCACTCTTTACTTGGA
AGCTTCTTCCGCCCAAGGAGCTGGTCCCAAGTCTACAATATGTCCAGCTC
TTGAGTGCCGGGTGCAATCATGTTATGGGGACCTCGCTATTCGCTGAGAC
TGACGTCGCGTTTTGTACAGCGAATGGGGTTCATCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004143KJC3_004143Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004143-T1KJC3_004143-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004143-T1.cdsKJC3_004143-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004143-T1.utr3p1KJC3_004143-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004143-T1.exon6KJC3_004143-T1.exon6Aspergillus niger KJC3exon
KJC3_004143-T1.exon5KJC3_004143-T1.exon5Aspergillus niger KJC3exon
KJC3_004143-T1.exon4KJC3_004143-T1.exon4Aspergillus niger KJC3exon
KJC3_004143-T1.exon3KJC3_004143-T1.exon3Aspergillus niger KJC3exon
KJC3_004143-T1.exon2KJC3_004143-T1.exon2Aspergillus niger KJC3exon
KJC3_004143-T1.exon1KJC3_004143-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004143-T1.utr5p3KJC3_004143-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_004143-T1.utr5p2KJC3_004143-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004143-T1.utr5p1KJC3_004143-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029752
DBxrefInterPro:IPR006140
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4049564..4051707 -
Powered by Drupal